RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 LILRA3Q8N6C8 439 aaPredicted RBP10.43□□□□□ -0.74
TPM3-212ENST00000368533 LMNTD1Q8N9Z9 388 aa10.43□□□□□ -0.74
TPM3-212ENST00000368533 TAMM41Q96BW9 452 aa10.43□□□□□ -0.74
TPM3-212ENST00000368533 OTUB2Q96DC9 234 aa10.43□□□□□ -0.74
TPM3-212ENST00000368533 C3orf30Q96M34 536 aa10.43□□□□□ -0.74
TPM3-212ENST00000368533 OSBPL10Q9BXB5 764 aa10.43□□□□□ -0.74
TPM3-212ENST00000368533 NOL11Q9H8H0 719 aaKnown RBP10.43□□□□□ -0.74
TPM3-212ENST00000368533 EGFL7Q9UHF1 273 aa10.43□□□□□ -0.74
TPM3-212ENST00000368533 HCN2Q9UL51 889 aa10.43□□□□□ -0.74
TPM3-212ENST00000368533 TMPRSS11EQ9UL52 423 aa10.43□□□□□ -0.74
TPM3-212ENST00000368533 ACOT8O14734 319 aa10.42□□□□□ -0.74
TPM3-212ENST00000368533 ANGPT2O15123 496 aa10.42□□□□□ -0.74
TPM3-212ENST00000368533 AXIN1O15169 862 aa10.42□□□□□ -0.74
TPM3-212ENST00000368533 ECI2O75521 394 aa10.42□□□□□ -0.74
TPM3-212ENST00000368533 TIPRLO75663 272 aa10.42□□□□□ -0.74
TPM3-212ENST00000368533 H6PDO95479 791 aa10.42□□□□□ -0.74
TPM3-212ENST00000368533 CLIC3O95833 236 aa10.42□□□□□ -0.74
TPM3-212ENST00000368533 ELFN1P0C7U0 828 aa10.42□□□□□ -0.74
TPM3-212ENST00000368533 PRDX3P30048 256 aaKnown RBP10.42□□□□□ -0.74
TPM3-212ENST00000368533 GDF5P43026 501 aa10.42□□□□□ -0.74
TPM3-212ENST00000368533 MAPK8P45983 427 aa10.42□□□□□ -0.74
TPM3-212ENST00000368533 MTX3Q5HYI7 312 aa10.42□□□□□ -0.74
TPM3-212ENST00000368533 AARS2Q5JTZ9 985 aaKnown RBP10.42□□□□□ -0.74
TPM3-212ENST00000368533 PRR23BQ6ZRT6 265 aa10.42□□□□□ -0.74
TPM3-212ENST00000368533 GPR141Q7Z602 305 aa10.42□□□□□ -0.74
TPM3-212ENST00000368533 SNX20Q7Z614 316 aa10.42□□□□□ -0.74
TPM3-212ENST00000368533 TANKQ92844 425 aa10.42□□□□□ -0.74
TPM3-212ENST00000368533 BORCS5Q969J3 196 aa10.42□□□□□ -0.74
TPM3-212ENST00000368533 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.42□□□□□ -0.74
TPM3-212ENST00000368533 ARRDC3Q96B67 414 aa10.42□□□□□ -0.74
TPM3-212ENST00000368533 ECHDC3Q96DC8 303 aa10.42□□□□□ -0.74
TPM3-212ENST00000368533 ASB9Q96DX5 294 aa10.42□□□□□ -0.74
TPM3-212ENST00000368533 SLC29A1Q99808 456 aa10.42□□□□□ -0.74
TPM3-212ENST00000368533 EFHD1Q9BUP0 239 aa10.42□□□□□ -0.74
TPM3-212ENST00000368533 TRIM8Q9BZR9 551 aa10.42□□□□□ -0.74
TPM3-212ENST00000368533 GSTO2Q9H4Y5 243 aa10.42□□□□□ -0.74
TPM3-212ENST00000368533 AKTIPQ9H8T0 292 aa10.42□□□□□ -0.74
TPM3-212ENST00000368533 MEAF6Q9HAF1 191 aa10.42□□□□□ -0.74
TPM3-212ENST00000368533 MRPL40Q9NQ50 206 aaKnown RBP10.42□□□□□ -0.74
TPM3-212ENST00000368533 OLAHQ9NV23 265 aa10.42□□□□□ -0.74
TPM3-212ENST00000368533 INTS10Q9NVR2 710 aaKnown RBP10.42□□□□□ -0.74
TPM3-212ENST00000368533 CD274Q9NZQ7 290 aa10.42□□□□□ -0.74
TPM3-212ENST00000368533 MARK1Q9P0L2 795 aa10.42□□□□□ -0.74
TPM3-212ENST00000368533 PCDHGA3Q9Y5H0 932 aa10.42□□□□□ -0.74
TPM3-212ENST00000368533 AQP9O43315 295 aa10.42□□□□□ -0.74
TPM3-212ENST00000368533 GNAO1P09471 354 aa10.42□□□□□ -0.74
TPM3-212ENST00000368533 ACRV1P26436 265 aa10.42□□□□□ -0.74
TPM3-212ENST00000368533 LTBRP36941 435 aa10.42□□□□□ -0.74
TPM3-212ENST00000368533 ALDH3B2P48448 385 aa10.42□□□□□ -0.74
TPM3-212ENST00000368533 SPINT3P49223 89 aa10.42□□□□□ -0.74
TPM3-212ENST00000368533 PCYT1AP49585 367 aa10.42□□□□□ -0.74
TPM3-212ENST00000368533 FOXA1P55317 472 aa10.42□□□□□ -0.74
TPM3-212ENST00000368533 B4GALNT1Q00973 533 aa10.42□□□□□ -0.74
TPM3-212ENST00000368533 CAPRIN1Q14444 709 aaKnown RBP10.42□□□□□ -0.74
TPM3-212ENST00000368533 CLPPQ16740 277 aaPredicted RBP10.42□□□□□ -0.74
TPM3-212ENST00000368533 ZNF829Q3KNS6 432 aaPredicted RBP10.42□□□□□ -0.74
TPM3-212ENST00000368533 ZNF678Q5SXM1 525 aa10.42□□□□□ -0.74
TPM3-212ENST00000368533 DHFR2Q86XF0 187 aa10.42□□□□□ -0.74
TPM3-212ENST00000368533 FAM47BQ8NA70 645 aa10.42□□□□□ -0.74
TPM3-212ENST00000368533 PCYOX1LQ8NBM8 494 aa10.42□□□□□ -0.74
TPM3-212ENST00000368533 SUSD6Q92537 303 aa10.42□□□□□ -0.74
TPM3-212ENST00000368533 MAELQ96JY0 434 aaKnown RBP10.42□□□□□ -0.74
TPM3-212ENST00000368533 HAUS8Q9BT25 410 aa10.42□□□□□ -0.74
TPM3-212ENST00000368533 COL4A3Q01955 1670 aa10.42□□□□□ -0.74
TPM3-212ENST00000368533 FRYLO94915 3013 aa10.42□□□□□ -0.74
TPM3-212ENST00000368533 TMEM202A6NGA9 273 aa10.42□□□□□ -0.74
TPM3-212ENST00000368533 SAC3D1A6NKF1 404 aa10.42□□□□□ -0.74
TPM3-212ENST00000368533 FADS2P1A8MWK0 482 aa10.42□□□□□ -0.74
TPM3-212ENST00000368533 UPK3BL1B0FP48 263 aa10.42□□□□□ -0.74
TPM3-212ENST00000368533 UPK3BL2E5RIL1 263 aa10.42□□□□□ -0.74
TPM3-212ENST00000368533 PIP5K1BO14986 540 aa10.42□□□□□ -0.74
TPM3-212ENST00000368533 HOXC11O43248 304 aaPredicted RBP10.42□□□□□ -0.74
TPM3-212ENST00000368533 ZNF7P17097 686 aaPredicted RBP10.42□□□□□ -0.74
TPM3-212ENST00000368533 EEF1DP29692 281 aaKnown RBP10.42□□□□□ -0.74
TPM3-212ENST00000368533 PIK3CGP48736 1102 aa10.42□□□□□ -0.74
TPM3-212ENST00000368533 HK3P52790 923 aa10.42□□□□□ -0.74
TPM3-212ENST00000368533 IL2P60568 153 aa10.42□□□□□ -0.74
TPM3-212ENST00000368533 SH3BP2P78314 561 aa10.42□□□□□ -0.74
TPM3-212ENST00000368533 PLA2G4EQ3MJ16 856 aa10.42□□□□□ -0.74
TPM3-212ENST00000368533 UNC50Q53HI1 259 aa10.42□□□□□ -0.74
TPM3-212ENST00000368533 C9orf64Q5T6V5 341 aa10.42□□□□□ -0.74
TPM3-212ENST00000368533 UGT3A1Q6NUS8 523 aa10.42□□□□□ -0.74
TPM3-212ENST00000368533 DHRS4L2Q6PKH6 230 aa10.42□□□□□ -0.74
TPM3-212ENST00000368533 CLYBLQ8N0X4 340 aa10.42□□□□□ -0.74
TPM3-212ENST00000368533 NXPE1Q8N323 547 aa10.42□□□□□ -0.74
TPM3-212ENST00000368533 ZNF786Q8N393 782 aa10.42□□□□□ -0.74
TPM3-212ENST00000368533 GANCQ8TET4 914 aa10.42□□□□□ -0.74
TPM3-212ENST00000368533 ISG20Q96AZ6 181 aaKnown RBP10.42□□□□□ -0.74
TPM3-212ENST00000368533 TUBA8Q9NY65 449 aaPredicted RBP10.42□□□□□ -0.74
TPM3-212ENST00000368533 GDE1Q9NZC3 331 aa10.42□□□□□ -0.74
TPM3-212ENST00000368533 KATNA1O75449 491 aa10.41□□□□□ -0.74
TPM3-212ENST00000368533 MTHFD2P13995 350 aa10.41□□□□□ -0.74
TPM3-212ENST00000368533 HGFP14210 728 aa10.41□□□□□ -0.74
TPM3-212ENST00000368533 CKMT2P17540 419 aa10.41□□□□□ -0.74
TPM3-212ENST00000368533 PTGER3P43115 390 aa10.41□□□□□ -0.74
TPM3-212ENST00000368533 COL9A2Q14055 689 aaPredicted RBP10.41□□□□□ -0.74
TPM3-212ENST00000368533 TRIM16LQ309B1 348 aa10.41□□□□□ -0.74
TPM3-212ENST00000368533 PGS1Q32NB8 556 aa10.41□□□□□ -0.74
TPM3-212ENST00000368533 ZNF805Q5CZA5 627 aa10.41□□□□□ -0.74
TPM3-212ENST00000368533 SAMD4BQ5PRF9 694 aaKnown RBP10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms