RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 MATN1P21941 496 aa13.96□□□□□ -0.17
CD48-201ENST00000368045 HOXD10P28358 340 aa13.96□□□□□ -0.17
CD48-201ENST00000368045 S100A3P33764 101 aa13.96□□□□□ -0.17
CD48-201ENST00000368045 CA5AP35218 305 aa13.96□□□□□ -0.17
CD48-201ENST00000368045 GZMMP51124 257 aa13.96□□□□□ -0.17
CD48-201ENST00000368045 RAD23AP54725 363 aa13.96□□□□□ -0.17
CD48-201ENST00000368045 PLIN5Q00G26 463 aa13.96□□□□□ -0.17
CD48-201ENST00000368045 GTF2IRD2BQ6EKJ0 949 aa13.96□□□□□ -0.17
CD48-201ENST00000368045 ANKRD26P1Q6NSI1 321 aa13.96□□□□□ -0.17
CD48-201ENST00000368045 SUSD1Q6UWL2 747 aa13.96□□□□□ -0.17
CD48-201ENST00000368045 GTF2IRD2Q86UP8 949 aa13.96□□□□□ -0.17
CD48-201ENST00000368045 SPARTQ8N0X7 666 aa13.96□□□□□ -0.17
CD48-201ENST00000368045 NUDT8Q8WV74 236 aa13.96□□□□□ -0.17
CD48-201ENST00000368045 TESCQ96BS2 214 aa13.96□□□□□ -0.17
CD48-201ENST00000368045 HSPBAP1Q96EW2 488 aa13.96□□□□□ -0.17
CD48-201ENST00000368045 REXO5Q96IC2 774 aaKnown RBP13.96□□□□□ -0.17
CD48-201ENST00000368045 TM6SF2Q9BZW4 377 aa13.96□□□□□ -0.17
CD48-201ENST00000368045 AMBRA1Q9C0C7 1298 aa13.96□□□□□ -0.17
CD48-201ENST00000368045 ADNPQ9H2P0 1102 aa13.96□□□□□ -0.17
CD48-201ENST00000368045 SMURF2Q9HAU4 748 aa13.96□□□□□ -0.17
CD48-201ENST00000368045 PARVBQ9HBI1 364 aa13.96□□□□□ -0.17
CD48-201ENST00000368045 ZFP14Q9HCL3 533 aa13.96□□□□□ -0.17
CD48-201ENST00000368045 ZDHHC3Q9NYG2 299 aa13.96□□□□□ -0.17
CD48-201ENST00000368045 PSME2Q9UL46 239 aa13.96□□□□□ -0.17
CD48-201ENST00000368045 SNX6Q9UNH7 406 aa13.96□□□□□ -0.17
CD48-201ENST00000368045 NAALAD2Q9Y3Q0 740 aa13.96□□□□□ -0.17
CD48-201ENST00000368045 K7ERQ8 282 aa13.96□□□□□ -0.18
CD48-201ENST00000368045 PITPNM1O00562 1244 aa13.96□□□□□ -0.18
CD48-201ENST00000368045 PER2O15055 1255 aa13.96□□□□□ -0.18
CD48-201ENST00000368045 SLC16A6O15403 523 aa13.96□□□□□ -0.18
CD48-201ENST00000368045 CBFA2T3O75081 653 aa13.96□□□□□ -0.18
CD48-201ENST00000368045 CLDN7O95471 211 aa13.96□□□□□ -0.18
CD48-201ENST00000368045 BCL10O95999 233 aa13.96□□□□□ -0.18
CD48-201ENST00000368045 ITGAMP11215 1152 aa13.96□□□□□ -0.18
CD48-201ENST00000368045 HOXB9P17482 250 aaPredicted RBP13.96□□□□□ -0.18
CD48-201ENST00000368045 UGT1A1P22309 533 aa13.96□□□□□ -0.18
CD48-201ENST00000368045 UGT1A4P22310 534 aa13.96□□□□□ -0.18
CD48-201ENST00000368045 SERPINA4P29622 427 aa13.96□□□□□ -0.18
CD48-201ENST00000368045 RYKP34925 604 aa13.96□□□□□ -0.18
CD48-201ENST00000368045 UGT1A3P35503 534 aa13.96□□□□□ -0.18
CD48-201ENST00000368045 UGT1A5P35504 534 aa13.96□□□□□ -0.18
CD48-201ENST00000368045 DCTP40126 519 aa13.96□□□□□ -0.18
CD48-201ENST00000368045 CAP1Q01518 475 aa13.96□□□□□ -0.18
CD48-201ENST00000368045 SP3Q02447 781 aa13.96□□□□□ -0.18
CD48-201ENST00000368045 ABHD18Q0P651 414 aa13.96□□□□□ -0.18
CD48-201ENST00000368045 KCNAB2Q13303 367 aa13.96□□□□□ -0.18
CD48-201ENST00000368045 BOP1Q14137 746 aaKnown RBP13.96□□□□□ -0.18
CD48-201ENST00000368045 SGO1Q5FBB7 561 aa13.96□□□□□ -0.18
CD48-201ENST00000368045 CHST15Q7LFX5 561 aaPredicted RBP13.96□□□□□ -0.18
CD48-201ENST00000368045 KRTCAP2Q8N6L1 136 aa13.96□□□□□ -0.18
CD48-201ENST00000368045 PAF1Q8N7H5 531 aa13.96□□□□□ -0.18
CD48-201ENST00000368045 NCLNQ969V3 563 aa13.96□□□□□ -0.18
CD48-201ENST00000368045 ZNF566Q969W8 418 aa13.96□□□□□ -0.18
CD48-201ENST00000368045 CMTM7Q96FZ5 175 aa13.96□□□□□ -0.18
CD48-201ENST00000368045 IGSF21Q96ID5 467 aa13.96□□□□□ -0.18
CD48-201ENST00000368045 BCL7BQ9BQE9 202 aa13.96□□□□□ -0.18
CD48-201ENST00000368045 ACPTQ9BZG2 426 aa13.96□□□□□ -0.18
CD48-201ENST00000368045 NAA50Q9GZZ1 169 aaKnown RBP13.96□□□□□ -0.18
CD48-201ENST00000368045 PCDHB14Q9Y5E9 798 aa13.96□□□□□ -0.18
CD48-201ENST00000368045 PCDHGA8Q9Y5G5 932 aa13.96□□□□□ -0.18
CD48-201ENST00000368045 MAGED1Q9Y5V3 778 aaPredicted RBP13.96□□□□□ -0.18
CD48-201ENST00000368045 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.95□□□□□ -0.18
CD48-201ENST00000368045 C8GP07360 202 aa13.95□□□□□ -0.18
CD48-201ENST00000368045 CCDC159P0C7I6 412 aa13.95□□□□□ -0.18
CD48-201ENST00000368045 ITIH1P19827 911 aa13.95□□□□□ -0.18
CD48-201ENST00000368045 MAGEA2P43356 314 aa13.95□□□□□ -0.18
CD48-201ENST00000368045 HNMTP50135 292 aa13.95□□□□□ -0.18
CD48-201ENST00000368045 C21orf59P57076 290 aa13.95□□□□□ -0.18
CD48-201ENST00000368045 ARHGEF7Q14155 803 aa13.95□□□□□ -0.18
CD48-201ENST00000368045 MPP7Q5T2T1 576 aa13.95□□□□□ -0.18
CD48-201ENST00000368045 ZDHHC20Q5W0Z9 365 aa13.95□□□□□ -0.18
CD48-201ENST00000368045 LHX8Q68G74 356 aa13.95□□□□□ -0.18
CD48-201ENST00000368045 SPESP1Q6UW49 350 aa13.95□□□□□ -0.18
CD48-201ENST00000368045 GCNT7Q6ZNI0 430 aa13.95□□□□□ -0.18
CD48-201ENST00000368045 ZNF554Q86TJ5 538 aa13.95□□□□□ -0.18
CD48-201ENST00000368045 EGFL6Q8IUX8 553 aa13.95□□□□□ -0.18
CD48-201ENST00000368045 BEND7Q8N7W2 519 aaPredicted RBP13.95□□□□□ -0.18
CD48-201ENST00000368045 ARL10Q8N8L6 244 aa13.95□□□□□ -0.18
CD48-201ENST00000368045 RNF217Q8TC41 542 aa13.95□□□□□ -0.18
CD48-201ENST00000368045 WFDC5Q8TCV5 224 aa13.95□□□□□ -0.18
CD48-201ENST00000368045 ADAMTS19Q8TE59 1207 aa13.95□□□□□ -0.18
CD48-201ENST00000368045 FBLIM1Q8WUP2 373 aa13.95□□□□□ -0.18
CD48-201ENST00000368045 MUL1Q969V5 352 aa13.95□□□□□ -0.18
CD48-201ENST00000368045 PYURFQ96I23 114 aa13.95□□□□□ -0.18
CD48-201ENST00000368045 ZIC5Q96T25 663 aa13.95□□□□□ -0.18
CD48-201ENST00000368045 TBCDQ9BTW9 1192 aa13.95□□□□□ -0.18
CD48-201ENST00000368045 VN1R3Q9BXE9 311 aa13.95□□□□□ -0.18
CD48-201ENST00000368045 LHPPQ9H008 270 aa13.95□□□□□ -0.18
CD48-201ENST00000368045 GABARAPL1Q9H0R8 117 aa13.95□□□□□ -0.18
CD48-201ENST00000368045 SERHLQ9NQF3 203 aa13.95□□□□□ -0.18
CD48-201ENST00000368045 SNX5Q9Y5X3 404 aa13.95□□□□□ -0.18
CD48-201ENST00000368045 KCNE1BA0A087WTH5 132 aa13.94□□□□□ -0.18
CD48-201ENST00000368045 LOC100130705A0A1B0GUX0 176 aa13.94□□□□□ -0.18
CD48-201ENST00000368045 AREL1O15033 823 aa13.94□□□□□ -0.18
CD48-201ENST00000368045 B4GAT1O43505 415 aa13.94□□□□□ -0.18
CD48-201ENST00000368045 SMAD6O43541 496 aaKnown RBP13.94□□□□□ -0.18
CD48-201ENST00000368045 E2F6O75461 281 aa13.94□□□□□ -0.18
CD48-201ENST00000368045 OLFM2O95897 454 aa13.94□□□□□ -0.18
CD48-201ENST00000368045 SERPINA1P01009 418 aa13.94□□□□□ -0.18
CD48-201ENST00000368045 MPC1LP0DKB6 136 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms