RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 BEND5Q7L4P6 421 aa11.57□□□□□ -0.56
CDC42BPA-202ENST00000366764 ZBED6CLQ96FA7 236 aaPredicted RBP11.57□□□□□ -0.56
CDC42BPA-202ENST00000366764 GPN1Q9HCN4 374 aaPredicted RBP11.57□□□□□ -0.56
CDC42BPA-202ENST00000366764 TMEM248Q9NWD8 314 aa11.57□□□□□ -0.56
CDC42BPA-202ENST00000366764 TPTEP56180 551 aa11.57□□□□□ -0.56
CDC42BPA-202ENST00000366764 NRG1Q02297 640 aaPredicted RBP11.57□□□□□ -0.56
CDC42BPA-202ENST00000366764 DGKZQ13574 1117 aa11.57□□□□□ -0.56
CDC42BPA-202ENST00000366764 TAZQ16635 292 aa11.57□□□□□ -0.56
CDC42BPA-202ENST00000366764 SYCE2Q6PIF2 218 aa11.57□□□□□ -0.56
CDC42BPA-202ENST00000366764 COL21A1Q96P44 957 aa11.57□□□□□ -0.56
CDC42BPA-202ENST00000366764 PADI3Q9ULW8 664 aa11.57□□□□□ -0.56
CDC42BPA-202ENST00000366764 ASB3Q9Y575 518 aa11.57□□□□□ -0.56
CDC42BPA-202ENST00000366764 STON1Q9Y6Q2 735 aa11.57□□□□□ -0.56
CDC42BPA-202ENST00000366764 ZNF780BQ9Y6R6 833 aa11.57□□□□□ -0.56
CDC42BPA-202ENST00000366764 WWP2O00308 870 aa11.57□□□□□ -0.56
CDC42BPA-202ENST00000366764 CDH12P55289 794 aa11.57□□□□□ -0.56
CDC42BPA-202ENST00000366764 TOR4AQ9NXH8 423 aa11.57□□□□□ -0.56
CDC42BPA-202ENST00000366764 FKBPLQ9UIM3 349 aa11.57□□□□□ -0.56
CDC42BPA-202ENST00000366764 AP1M2Q9Y6Q5 423 aa11.57□□□□□ -0.56
CDC42BPA-202ENST00000366764 SLX4Q8IY92 1834 aa11.57□□□□□ -0.56
CDC42BPA-202ENST00000366764 ZNF181Q2M3W8 571 aa11.57□□□□□ -0.56
CDC42BPA-202ENST00000366764 ZNF678Q5SXM1 525 aa11.57□□□□□ -0.56
CDC42BPA-202ENST00000366764 RAET1GQ6H3X3 334 aa11.57□□□□□ -0.56
CDC42BPA-202ENST00000366764 GALNT7Q86SF2 657 aa11.57□□□□□ -0.56
CDC42BPA-202ENST00000366764 C15orf40Q8WUR7 153 aa11.57□□□□□ -0.56
CDC42BPA-202ENST00000366764 MAPKAP1Q9BPZ7 522 aa11.57□□□□□ -0.56
CDC42BPA-202ENST00000366764 SLC39A3Q9BRY0 314 aa11.57□□□□□ -0.56
CDC42BPA-202ENST00000366764 ITPAQ9BY32 194 aa11.57□□□□□ -0.56
CDC42BPA-202ENST00000366764 SLC7A5P2Q9GIP4 190 aa11.57□□□□□ -0.56
CDC42BPA-202ENST00000366764 MATN4O95460 622 aa11.57□□□□□ -0.56
CDC42BPA-202ENST00000366764 ZNF730Q6ZMV8 503 aa11.57□□□□□ -0.56
CDC42BPA-202ENST00000366764 MSANTD1Q6ZTZ1 278 aa11.57□□□□□ -0.56
CDC42BPA-202ENST00000366764 RAVER1Q8IY67 606 aaKnown RBP11.57□□□□□ -0.56
CDC42BPA-202ENST00000366764 UFD1Q92890 307 aa11.57□□□□□ -0.56
CDC42BPA-202ENST00000366764 AP2M1Q96CW1 435 aa11.57□□□□□ -0.56
CDC42BPA-202ENST00000366764 EFCAB11Q9BUY7 163 aa11.57□□□□□ -0.56
CDC42BPA-202ENST00000366764 SMURF2Q9HAU4 748 aa11.57□□□□□ -0.56
CDC42BPA-202ENST00000366764 DUSP4Q13115 394 aa11.57□□□□□ -0.56
CDC42BPA-202ENST00000366764 MTAPQ13126 283 aa11.57□□□□□ -0.56
CDC42BPA-202ENST00000366764 IRF5Q13568 498 aa11.57□□□□□ -0.56
CDC42BPA-202ENST00000366764 FAM117BQ6P1L5 589 aa11.57□□□□□ -0.56
CDC42BPA-202ENST00000366764 GATAD2AQ86YP4 633 aa11.57□□□□□ -0.56
CDC42BPA-202ENST00000366764 PHYKPLQ8IUZ5 450 aa11.57□□□□□ -0.56
CDC42BPA-202ENST00000366764 SIDT2Q8NBJ9 832 aaKnown RBP11.57□□□□□ -0.56
CDC42BPA-202ENST00000366764 SUSD6Q92537 303 aa11.57□□□□□ -0.56
CDC42BPA-202ENST00000366764 LMAN2LQ9H0V9 348 aa11.57□□□□□ -0.56
CDC42BPA-202ENST00000366764 ITM2BQ9Y287 266 aa11.57□□□□□ -0.56
CDC42BPA-202ENST00000366764 H3BM21 787 aa11.56□□□□□ -0.56
CDC42BPA-202ENST00000366764 ADH1CP00326 375 aa11.56□□□□□ -0.56
CDC42BPA-202ENST00000366764 GSTM2P28161 218 aa11.56□□□□□ -0.56
CDC42BPA-202ENST00000366764 CENPAP49450 140 aa11.56□□□□□ -0.56
CDC42BPA-202ENST00000366764 ARPC4P59998 168 aa11.56□□□□□ -0.56
CDC42BPA-202ENST00000366764 PYURFQ96I23 114 aa11.56□□□□□ -0.56
CDC42BPA-202ENST00000366764 ZNF641Q96N77 438 aaPredicted RBP11.56□□□□□ -0.56
CDC42BPA-202ENST00000366764 COMMD9Q9P000 198 aa11.56□□□□□ -0.56
CDC42BPA-202ENST00000366764 RIMKLBQ9ULI2 386 aa11.56□□□□□ -0.56
CDC42BPA-202ENST00000366764 POLR2AP24928 1970 aaKnown RBP11.56□□□□□ -0.56
CDC42BPA-202ENST00000366764 PIRO00625 290 aa11.56□□□□□ -0.56
CDC42BPA-202ENST00000366764 PLOD3O60568 738 aa11.56□□□□□ -0.56
CDC42BPA-202ENST00000366764 PORP16435 677 aaPredicted RBP11.56□□□□□ -0.56
CDC42BPA-202ENST00000366764 AQP1P29972 269 aa11.56□□□□□ -0.56
CDC42BPA-202ENST00000366764 NFKB2Q00653 900 aa11.56□□□□□ -0.56
CDC42BPA-202ENST00000366764 FRG2Q64ET8 278 aa11.56□□□□□ -0.56
CDC42BPA-202ENST00000366764 USP30Q70CQ3 517 aa11.56□□□□□ -0.56
CDC42BPA-202ENST00000366764 CFAP52Q8N1V2 620 aa11.56□□□□□ -0.56
CDC42BPA-202ENST00000366764 WDTC1Q8N5D0 677 aa11.56□□□□□ -0.56
CDC42BPA-202ENST00000366764 FRG2BQ96QU4 278 aa11.56□□□□□ -0.56
CDC42BPA-202ENST00000366764 TRIM39Q9HCM9 518 aa11.56□□□□□ -0.56
CDC42BPA-202ENST00000366764 CCDC177Q9NQR7 707 aaPredicted RBP11.56□□□□□ -0.56
CDC42BPA-202ENST00000366764 RIIAD1A6NNX1 92 aa11.56□□□□□ -0.56
CDC42BPA-202ENST00000366764 RSL1D1O76021 490 aaKnown RBP11.56□□□□□ -0.56
CDC42BPA-202ENST00000366764 ITPKAP23677 461 aa11.56□□□□□ -0.56
CDC42BPA-202ENST00000366764 IL18Q14116 193 aa11.56□□□□□ -0.56
CDC42BPA-202ENST00000366764 DUOXA1Q1HG43 343 aa11.56□□□□□ -0.56
CDC42BPA-202ENST00000366764 GPAT3Q53EU6 434 aa11.56□□□□□ -0.56
CDC42BPA-202ENST00000366764 ADGRF1Q5T601 910 aa11.56□□□□□ -0.56
CDC42BPA-202ENST00000366764 OGFOD2Q6N063 350 aa11.56□□□□□ -0.56
CDC42BPA-202ENST00000366764 CXorf40AQ8TE69 158 aa11.56□□□□□ -0.56
CDC42BPA-202ENST00000366764 VPS29Q9UBQ0 182 aa11.56□□□□□ -0.56
CDC42BPA-202ENST00000366764 PITPNM1O00562 1244 aa11.56□□□□□ -0.56
CDC42BPA-202ENST00000366764 TBX1O43435 398 aa11.56□□□□□ -0.56
CDC42BPA-202ENST00000366764 AKAP8O43823 692 aaKnown RBP11.56□□□□□ -0.56
CDC42BPA-202ENST00000366764 METTL2BQ6P1Q9 378 aaKnown RBP11.56□□□□□ -0.56
CDC42BPA-202ENST00000366764 FAM83DQ9H4H8 585 aa11.56□□□□□ -0.56
CDC42BPA-202ENST00000366764 PCDHGB1Q9Y5G3 927 aa11.56□□□□□ -0.56
CDC42BPA-202ENST00000366764 NME6O75414 186 aaPredicted RBP11.56□□□□□ -0.56
CDC42BPA-202ENST00000366764 CD72P21854 359 aa11.56□□□□□ -0.56
CDC42BPA-202ENST00000366764 CCR10P46092 362 aa11.56□□□□□ -0.56
CDC42BPA-202ENST00000366764 BRCC3P46736 316 aa11.56□□□□□ -0.56
CDC42BPA-202ENST00000366764 SAPCD2Q86UD0 394 aa11.56□□□□□ -0.56
CDC42BPA-202ENST00000366764 UMODL1-AS1Q8N2C9 162 aa11.56□□□□□ -0.56
CDC42BPA-202ENST00000366764 IMP4Q96G21 291 aaKnown RBP11.56□□□□□ -0.56
CDC42BPA-202ENST00000366764 POLR2J3Q9H1A7 115 aaKnown RBP11.56□□□□□ -0.56
CDC42BPA-202ENST00000366764 SLC32A1Q9H598 525 aa11.56□□□□□ -0.56
CDC42BPA-202ENST00000366764 MAGEA8P43361 318 aa11.56□□□□□ -0.56
CDC42BPA-202ENST00000366764 PAMR1Q6UXH9 720 aa11.56□□□□□ -0.56
CDC42BPA-202ENST00000366764 ANKRD46Q86W74 232 aa11.56□□□□□ -0.56
CDC42BPA-202ENST00000366764 CENPSQ8N2Z9 138 aa11.56□□□□□ -0.56
CDC42BPA-202ENST00000366764 SLC30A2Q9BRI3 323 aa11.56□□□□□ -0.56
CDC42BPA-202ENST00000366764 OR1D2P34982 312 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms