RNA–Protein interactions for RNA: ENST00000366733.5

MRPL55-207, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-207ENST00000366733 CAMK1GQ96NX5 476 aa12.86□□□□□ -0.35
MRPL55-207ENST00000366733 RAB11FIP5Q9BXF6 653 aa12.86□□□□□ -0.35
MRPL55-207ENST00000366733 FSCN3Q9NQT6 498 aa12.86□□□□□ -0.35
MRPL55-207ENST00000366733 IMP3Q9NV31 184 aaKnown RBP12.86□□□□□ -0.35
MRPL55-207ENST00000366733 INTS9Q9NV88 658 aaKnown RBP12.86□□□□□ -0.35
MRPL55-207ENST00000366733 CD274Q9NZQ7 290 aa12.86□□□□□ -0.35
MRPL55-207ENST00000366733 STOX2Q9P2F5 926 aaPredicted RBP12.86□□□□□ -0.35
MRPL55-207ENST00000366733 CPNE7Q9UBL6 633 aa12.86□□□□□ -0.35
MRPL55-207ENST00000366733 TNPO3Q9Y5L0 923 aaKnown RBP12.86□□□□□ -0.35
MRPL55-207ENST00000366733 CFAP20Q9Y6A4 193 aaKnown RBP12.86□□□□□ -0.35
MRPL55-207ENST00000366733 FAM221BA6H8Z2 402 aa12.85□□□□□ -0.35
MRPL55-207ENST00000366733 PABPN1LA6NDY0 278 aaKnown RBP12.85□□□□□ -0.35
MRPL55-207ENST00000366733 ZNF839A8K0R7 811 aa12.85□□□□□ -0.35
MRPL55-207ENST00000366733 B4DGG1 531 aa12.85□□□□□ -0.35
MRPL55-207ENST00000366733 TAPBPO15533 448 aa12.85□□□□□ -0.35
MRPL55-207ENST00000366733 TRIM13O60858 407 aa12.85□□□□□ -0.35
MRPL55-207ENST00000366733 SLC16A8O95907 504 aa12.85□□□□□ -0.35
MRPL55-207ENST00000366733 LMNAP02545 664 aaKnown RBP12.85□□□□□ -0.35
MRPL55-207ENST00000366733 S100BP04271 92 aaPredicted RBP12.85□□□□□ -0.35
MRPL55-207ENST00000366733 RPS17P08708 135 aaKnown RBP12.85□□□□□ -0.35
MRPL55-207ENST00000366733 GFAPP14136 432 aa12.85□□□□□ -0.35
MRPL55-207ENST00000366733 IMPDH1P20839 514 aa12.85□□□□□ -0.35
MRPL55-207ENST00000366733 IMPA1P29218 277 aa12.85□□□□□ -0.35
MRPL55-207ENST00000366733 RAB28P51157 221 aa12.85□□□□□ -0.35
MRPL55-207ENST00000366733 HERVK_113P63132 956 aa12.85□□□□□ -0.35
MRPL55-207ENST00000366733 IL9RQ01113 521 aa12.85□□□□□ -0.35
MRPL55-207ENST00000366733 TCEA2Q15560 299 aa12.85□□□□□ -0.35
MRPL55-207ENST00000366733 CSRP2Q16527 193 aa12.85□□□□□ -0.35
MRPL55-207ENST00000366733 PDK4Q16654 411 aa12.85□□□□□ -0.35
MRPL55-207ENST00000366733 PFKFB4Q16877 469 aa12.85□□□□□ -0.35
MRPL55-207ENST00000366733 ZXDCQ2QGD7 858 aaPredicted RBP12.85□□□□□ -0.35
MRPL55-207ENST00000366733 DEFB133Q30KQ1 61 aa12.85□□□□□ -0.35
MRPL55-207ENST00000366733 C14orf28Q4W4Y0 310 aa12.85□□□□□ -0.35
MRPL55-207ENST00000366733 TCEAL6Q6IPX3 200 aa12.85□□□□□ -0.35
MRPL55-207ENST00000366733 ZCCHC8Q6NZY4 707 aaKnown RBP12.85□□□□□ -0.35
MRPL55-207ENST00000366733 DUS1LQ6P1R4 473 aaKnown RBP12.85□□□□□ -0.35
MRPL55-207ENST00000366733 RGS9BPQ6ZS82 235 aa12.85□□□□□ -0.35
MRPL55-207ENST00000366733 ZNF438Q7Z4V0 828 aa12.85□□□□□ -0.35
MRPL55-207ENST00000366733 SLC9B2Q86UD5 537 aa12.85□□□□□ -0.35
MRPL55-207ENST00000366733 C10orf107Q8IVU9 208 aa12.85□□□□□ -0.35
MRPL55-207ENST00000366733 ARL10Q8N8L6 244 aa12.85□□□□□ -0.35
MRPL55-207ENST00000366733 PTGR2Q8N8N7 351 aaPredicted RBP12.85□□□□□ -0.35
MRPL55-207ENST00000366733 CCDC63Q8NA47 563 aa12.85□□□□□ -0.35
MRPL55-207ENST00000366733 OR52E1Q8NGJ3 308 aa12.85□□□□□ -0.35
MRPL55-207ENST00000366733 OR56A3Q8NH54 315 aa12.85□□□□□ -0.35
MRPL55-207ENST00000366733 MAPK15Q8TD08 544 aa12.85□□□□□ -0.35
MRPL55-207ENST00000366733 ZNF480Q8WV37 535 aa12.85□□□□□ -0.35
MRPL55-207ENST00000366733 TCEAL3Q969E4 200 aa12.85□□□□□ -0.35
MRPL55-207ENST00000366733 FERD3LQ96RJ6 166 aa12.85□□□□□ -0.35
MRPL55-207ENST00000366733 TMEM79Q9BSE2 394 aa12.85□□□□□ -0.35
MRPL55-207ENST00000366733 ERVK-6Q9BXR3 956 aa12.85□□□□□ -0.35
MRPL55-207ENST00000366733 SMOC1Q9H4F8 434 aa12.85□□□□□ -0.35
MRPL55-207ENST00000366733 CCDC134Q9H6E4 229 aa12.85□□□□□ -0.35
MRPL55-207ENST00000366733 UTP6Q9NYH9 597 aaKnown RBP12.85□□□□□ -0.35
MRPL55-207ENST00000366733 OGFRQ9NZT2 677 aa12.85□□□□□ -0.35
MRPL55-207ENST00000366733 DOLKQ9UPQ8 538 aa12.85□□□□□ -0.35
MRPL55-207ENST00000366733 DNAH14Q0VDD8 3507 aa12.84□□□□□ -0.35
MRPL55-207ENST00000366733 CEP192Q8TEP8 1941 aa12.84□□□□□ -0.35
MRPL55-207ENST00000366733 PIKFYVEQ9Y2I7 2098 aa12.84□□□□□ -0.35
MRPL55-207ENST00000366733 E7ENX8 843 aa12.84□□□□□ -0.35
MRPL55-207ENST00000366733 FOXD2O60548 495 aaPredicted RBP12.84□□□□□ -0.35
MRPL55-207ENST00000366733 VIPP01282 170 aa12.84□□□□□ -0.35
MRPL55-207ENST00000366733 ALPPL2P10696 532 aa12.84□□□□□ -0.35
MRPL55-207ENST00000366733 FGF3P11487 239 aaPredicted RBP12.84□□□□□ -0.35
MRPL55-207ENST00000366733 GRK2P25098 689 aa12.84□□□□□ -0.35
MRPL55-207ENST00000366733 PKLRP30613 574 aa12.84□□□□□ -0.35
MRPL55-207ENST00000366733 SERPINB5P36952 375 aa12.84□□□□□ -0.35
MRPL55-207ENST00000366733 MDH1P40925 334 aaKnown RBP12.84□□□□□ -0.35
MRPL55-207ENST00000366733 ATP1A2P50993 1020 aa12.84□□□□□ -0.35
MRPL55-207ENST00000366733 TAP2Q03519 686 aa12.84□□□□□ -0.35
MRPL55-207ENST00000366733 PCDH1Q08174 1060 aa12.84□□□□□ -0.35
MRPL55-207ENST00000366733 SLC14A1Q13336 389 aa12.84□□□□□ -0.35
MRPL55-207ENST00000366733 NR1D2Q14995 579 aa12.84□□□□□ -0.35
MRPL55-207ENST00000366733 ZNF678Q5SXM1 525 aa12.84□□□□□ -0.35
MRPL55-207ENST00000366733 ANKS6Q68DC2 871 aa12.84□□□□□ -0.35
MRPL55-207ENST00000366733 AGTRAPQ6RW13 159 aa12.84□□□□□ -0.35
MRPL55-207ENST00000366733 MBOAT1Q6ZNC8 495 aa12.84□□□□□ -0.35
MRPL55-207ENST00000366733 RAB44Q7Z6P3 723 aaPredicted RBP12.84□□□□□ -0.35
MRPL55-207ENST00000366733 NUDCD3Q8IVD9 361 aa12.84□□□□□ -0.35
MRPL55-207ENST00000366733 TRIM42Q8IWZ5 723 aa12.84□□□□□ -0.35
MRPL55-207ENST00000366733 ARL14Q8N4G2 192 aa12.84□□□□□ -0.35
MRPL55-207ENST00000366733 MINDY1Q8N5J2 469 aa12.84□□□□□ -0.35
MRPL55-207ENST00000366733 KYQ8NBH2 561 aa12.84□□□□□ -0.35
MRPL55-207ENST00000366733 MGARPQ8TDB4 240 aa12.84□□□□□ -0.35
MRPL55-207ENST00000366733 CKAP2Q8WWK9 683 aa12.84□□□□□ -0.35
MRPL55-207ENST00000366733 PATE1Q8WXA2 126 aa12.84□□□□□ -0.35
MRPL55-207ENST00000366733 SREK1Q8WXA9 508 aaKnown RBP12.84□□□□□ -0.35
MRPL55-207ENST00000366733 SH3KBP1Q96B97 665 aa12.84□□□□□ -0.35
MRPL55-207ENST00000366733 HGH1Q9BTY7 390 aa12.84□□□□□ -0.35
MRPL55-207ENST00000366733 TRMOQ9BU70 441 aa12.84□□□□□ -0.35
MRPL55-207ENST00000366733 MECRQ9BV79 373 aa12.84□□□□□ -0.35
MRPL55-207ENST00000366733 SGPP1Q9BX95 441 aa12.84□□□□□ -0.35
MRPL55-207ENST00000366733 CD244Q9BZW8 370 aa12.84□□□□□ -0.35
MRPL55-207ENST00000366733 MLXIPLQ9NP71 852 aa12.84□□□□□ -0.35
MRPL55-207ENST00000366733 OR6C2Q9NZP2 312 aa12.84□□□□□ -0.35
MRPL55-207ENST00000366733 NCKIPSDQ9NZQ3 722 aa12.84□□□□□ -0.35
MRPL55-207ENST00000366733 ICKQ9UPZ9 632 aa12.84□□□□□ -0.35
MRPL55-207ENST00000366733 OTOGLQ3ZCN5 2332 aa12.83□□□□□ -0.36
MRPL55-207ENST00000366733 KNL1Q8NG31 2342 aa12.83□□□□□ -0.36
MRPL55-207ENST00000366733 PRAMEF33A0A0G2JMD5 474 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms