RNA–Protein interactions for RNA: ENST00000361909.8

CMTM3-201, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-201ENST00000361909 CCDC103Q8IW40 242 aa18.65■□□□□ 0.58
CMTM3-201ENST00000361909 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.65■□□□□ 0.58
CMTM3-201ENST00000361909 CNIH3Q8TBE1 160 aa18.65■□□□□ 0.58
CMTM3-201ENST00000361909 FATE1Q969F0 183 aa18.65■□□□□ 0.58
CMTM3-201ENST00000361909 SLC38A4Q969I6 547 aa18.65■□□□□ 0.58
CMTM3-201ENST00000361909 PABPC5Q96DU9 382 aaKnown RBP18.65■□□□□ 0.58
CMTM3-201ENST00000361909 ZNF419Q96HQ0 510 aaPredicted RBP18.65■□□□□ 0.58
CMTM3-201ENST00000361909 CEP295NLQ96MC4 621 aa18.65■□□□□ 0.58
CMTM3-201ENST00000361909 ZNF558Q96NG5 402 aa18.65■□□□□ 0.58
CMTM3-201ENST00000361909 DERL2Q9GZP9 239 aa18.65■□□□□ 0.58
CMTM3-201ENST00000361909 PIF1Q9H611 641 aa18.65■□□□□ 0.58
CMTM3-201ENST00000361909 OSER1Q9NX31 292 aa18.65■□□□□ 0.58
CMTM3-201ENST00000361909 RAPGEFL1Q9UHV5 662 aa18.65■□□□□ 0.58
CMTM3-201ENST00000361909 ADGRE2Q9UHX3 823 aa18.65■□□□□ 0.58
CMTM3-201ENST00000361909 SCML2Q9UQR0 700 aa18.65■□□□□ 0.58
CMTM3-201ENST00000361909 GRIP1Q9Y3R0 1128 aa18.65■□□□□ 0.58
CMTM3-201ENST00000361909 OR2A25A4D2G3 310 aa18.64■□□□□ 0.57
CMTM3-201ENST00000361909 MTMR11A4FU01 709 aa18.64■□□□□ 0.57
CMTM3-201ENST00000361909 SUPT3HB4E1H0 165 aa18.64■□□□□ 0.57
CMTM3-201ENST00000361909 HOXC11O43248 304 aaPredicted RBP18.64■□□□□ 0.57
CMTM3-201ENST00000361909 SLC2A3P11169 496 aa18.64■□□□□ 0.57
CMTM3-201ENST00000361909 CD36P16671 472 aa18.64■□□□□ 0.57
CMTM3-201ENST00000361909 NRIP1P48552 1158 aa18.64■□□□□ 0.57
CMTM3-201ENST00000361909 CLK1P49759 484 aaKnown RBP18.64■□□□□ 0.57
CMTM3-201ENST00000361909 MTPNP58546 118 aa18.64■□□□□ 0.57
CMTM3-201ENST00000361909 E2F2Q14209 437 aa18.64■□□□□ 0.57
CMTM3-201ENST00000361909 C6orf136Q5SQH8 315 aa18.64■□□□□ 0.57
CMTM3-201ENST00000361909 SHQ1Q6PI26 577 aaKnown RBP18.64■□□□□ 0.57
CMTM3-201ENST00000361909 ARHGAP36Q6ZRI8 547 aa18.64■□□□□ 0.57
CMTM3-201ENST00000361909 FBXO30Q8TB52 745 aa18.64■□□□□ 0.57
CMTM3-201ENST00000361909 FIG4Q92562 907 aa18.64■□□□□ 0.57
CMTM3-201ENST00000361909 TRIM63Q969Q1 353 aa18.64■□□□□ 0.57
CMTM3-201ENST00000361909 SPATA17Q96L03 361 aa18.64■□□□□ 0.57
CMTM3-201ENST00000361909 PPM1MQ96MI6 270 aa18.64■□□□□ 0.57
CMTM3-201ENST00000361909 CEP44Q9C0F1 390 aa18.64■□□□□ 0.57
CMTM3-201ENST00000361909 CARS2Q9HA77 564 aaKnown RBP18.64■□□□□ 0.57
CMTM3-201ENST00000361909 LIMD1Q9UGP4 676 aa18.64■□□□□ 0.57
CMTM3-201ENST00000361909 MKLN1Q9UL63 735 aa18.64■□□□□ 0.57
CMTM3-201ENST00000361909 RECQL5O94762 991 aaPredicted RBP18.64■□□□□ 0.57
CMTM3-201ENST00000361909 ALX3O95076 343 aa18.64■□□□□ 0.57
CMTM3-201ENST00000361909 MED26O95402 600 aa18.64■□□□□ 0.57
CMTM3-201ENST00000361909 KRT6AP02538 564 aa18.64■□□□□ 0.57
CMTM3-201ENST00000361909 MT-ND2P03891 347 aa18.64■□□□□ 0.57
CMTM3-201ENST00000361909 KRT6BP04259 564 aa18.64■□□□□ 0.57
CMTM3-201ENST00000361909 CHRNB1P11230 501 aa18.64■□□□□ 0.57
CMTM3-201ENST00000361909 LAG3P18627 525 aa18.64■□□□□ 0.57
CMTM3-201ENST00000361909 OGNP20774 298 aaKnown RBP18.64■□□□□ 0.57
CMTM3-201ENST00000361909 IGFBP5P24593 272 aa18.64■□□□□ 0.57
CMTM3-201ENST00000361909 ETV6P41212 452 aa18.64■□□□□ 0.57
CMTM3-201ENST00000361909 MAP2K4P45985 399 aa18.64■□□□□ 0.57
CMTM3-201ENST00000361909 NKX2-5P52952 324 aaPredicted RBP18.64■□□□□ 0.57
CMTM3-201ENST00000361909 ACVR1Q04771 509 aa18.64■□□□□ 0.57
CMTM3-201ENST00000361909 TRIP4Q15650 581 aaPredicted RBP18.64■□□□□ 0.57
CMTM3-201ENST00000361909 FAM219BQ5XKK7 198 aa18.64■□□□□ 0.57
CMTM3-201ENST00000361909 MRNIPQ6NTE8 343 aa18.64■□□□□ 0.57
CMTM3-201ENST00000361909 ENPP6Q6UWR7 440 aa18.64■□□□□ 0.57
CMTM3-201ENST00000361909 RSPO2Q6UXX9 243 aaPredicted RBP18.64■□□□□ 0.57
CMTM3-201ENST00000361909 MON1AQ86VX9 555 aa18.64■□□□□ 0.57
CMTM3-201ENST00000361909 RYBPQ8N488 228 aaPredicted RBP18.64■□□□□ 0.57
CMTM3-201ENST00000361909 Q8N9G6 341 aaPredicted RBP18.64■□□□□ 0.57
CMTM3-201ENST00000361909 FNDC5Q8NAU1 212 aa18.64■□□□□ 0.57
CMTM3-201ENST00000361909 ATAD1Q8NBU5 361 aa18.64■□□□□ 0.57
CMTM3-201ENST00000361909 OR56A4Q8NGH8 313 aa18.64■□□□□ 0.57
CMTM3-201ENST00000361909 OR6P1Q8NGX9 317 aa18.64■□□□□ 0.57
CMTM3-201ENST00000361909 ITPAQ9BY32 194 aa18.64■□□□□ 0.57
CMTM3-201ENST00000361909 RNF112Q9ULX5 631 aa18.64■□□□□ 0.57
CMTM3-201ENST00000361909 ELOVL7A1L3X0 281 aa18.63■□□□□ 0.57
CMTM3-201ENST00000361909 KLK8O60259 260 aa18.63■□□□□ 0.57
CMTM3-201ENST00000361909 EFNA1P20827 205 aaPredicted RBP18.63■□□□□ 0.57
CMTM3-201ENST00000361909 PPP3CCP48454 512 aa18.63■□□□□ 0.57
CMTM3-201ENST00000361909 IST1P53990 364 aa18.63■□□□□ 0.57
CMTM3-201ENST00000361909 EIF4EBP2Q13542 120 aaPredicted RBP18.63■□□□□ 0.57
CMTM3-201ENST00000361909 COLEC12Q5KU26 742 aa18.63■□□□□ 0.57
CMTM3-201ENST00000361909 CCBE1Q6UXH8 406 aaPredicted RBP18.63■□□□□ 0.57
CMTM3-201ENST00000361909 HOMEZQ8IX15 550 aa18.63■□□□□ 0.57
CMTM3-201ENST00000361909 SLC39A11Q8N1S5 342 aa18.63■□□□□ 0.57
CMTM3-201ENST00000361909 FBXO22Q8NEZ5 403 aa18.63■□□□□ 0.57
CMTM3-201ENST00000361909 KBTBD8Q8NFY9 601 aa18.63■□□□□ 0.57
CMTM3-201ENST00000361909 EDEM1Q92611 657 aa18.63■□□□□ 0.57
CMTM3-201ENST00000361909 FAM162AQ96A26 154 aa18.63■□□□□ 0.57
CMTM3-201ENST00000361909 LTB4R2Q9NPC1 389 aa18.63■□□□□ 0.57
CMTM3-201ENST00000361909 SEMA4BQ9NPR2 832 aaPredicted RBP18.63■□□□□ 0.57
CMTM3-201ENST00000361909 TBC1D14Q9P2M4 693 aa18.63■□□□□ 0.57
CMTM3-201ENST00000361909 LRRC14BA6NHZ5 514 aa18.62■□□□□ 0.57
CMTM3-201ENST00000361909 ZBBXA8MT70 800 aa18.62■□□□□ 0.57
CMTM3-201ENST00000361909 CD3EAPO15446 510 aaKnown RBP18.62■□□□□ 0.57
CMTM3-201ENST00000361909 IGLV3-25P01717 112 aa18.62■□□□□ 0.57
CMTM3-201ENST00000361909 SOD2P04179 222 aa18.62■□□□□ 0.57
CMTM3-201ENST00000361909 HAPLN1P10915 354 aaPredicted RBP18.62■□□□□ 0.57
CMTM3-201ENST00000361909 NKG7Q16617 165 aa18.62■□□□□ 0.57
CMTM3-201ENST00000361909 DDR2Q16832 855 aa18.62■□□□□ 0.57
CMTM3-201ENST00000361909 TPRG1LQ5T0D9 272 aa18.62■□□□□ 0.57
CMTM3-201ENST00000361909 SPOUT1Q5T280 376 aaKnown RBP18.62■□□□□ 0.57
CMTM3-201ENST00000361909 TMC5Q6UXY8 1006 aa18.62■□□□□ 0.57
CMTM3-201ENST00000361909 RNF19BQ6ZMZ0 732 aa18.62■□□□□ 0.57
CMTM3-201ENST00000361909 CCDC81Q6ZN84 652 aa18.62■□□□□ 0.57
CMTM3-201ENST00000361909 GPR149Q86SP6 731 aa18.62■□□□□ 0.57
CMTM3-201ENST00000361909 FAM86B1Q8N7N1 296 aa18.62■□□□□ 0.57
CMTM3-201ENST00000361909 NAT16Q8N8M0 369 aa18.62■□□□□ 0.57
CMTM3-201ENST00000361909 IL17RDQ8NFM7 739 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms