RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 FAM109AQ8N4B1 249 aa12.44□□□□□ -0.42
VAMP1-201ENST00000361716 LRRC52Q8N7C0 313 aa12.44□□□□□ -0.42
VAMP1-201ENST00000361716 ANKK1Q8NFD2 765 aa12.44□□□□□ -0.42
VAMP1-201ENST00000361716 FAM120BQ96EK7 910 aaKnown RBP12.44□□□□□ -0.42
VAMP1-201ENST00000361716 MSANTD3Q96H12 275 aa12.44□□□□□ -0.42
VAMP1-201ENST00000361716 CRTAC1Q9NQ79 661 aa12.44□□□□□ -0.42
VAMP1-201ENST00000361716 TAS2R16Q9NYV7 291 aa12.44□□□□□ -0.42
VAMP1-201ENST00000361716 CXCR6O00574 342 aa12.44□□□□□ -0.42
VAMP1-201ENST00000361716 PRSS23O95084 383 aa12.44□□□□□ -0.42
VAMP1-201ENST00000361716 TBX18O95935 607 aa12.44□□□□□ -0.42
VAMP1-201ENST00000361716 SLC2A3P11169 496 aa12.44□□□□□ -0.42
VAMP1-201ENST00000361716 CYP2A7P20853 494 aa12.44□□□□□ -0.42
VAMP1-201ENST00000361716 ARHGAP1Q07960 439 aa12.44□□□□□ -0.42
VAMP1-201ENST00000361716 KYAT1Q16773 422 aa12.44□□□□□ -0.42
VAMP1-201ENST00000361716 ZRANB3Q5FWF4 1079 aa12.44□□□□□ -0.42
VAMP1-201ENST00000361716 ANKS6Q68DC2 871 aa12.44□□□□□ -0.42
VAMP1-201ENST00000361716 CFAP52Q8N1V2 620 aa12.44□□□□□ -0.42
VAMP1-201ENST00000361716 ARRDC4Q8NCT1 418 aa12.44□□□□□ -0.42
VAMP1-201ENST00000361716 METTL6Q8TCB7 284 aa12.44□□□□□ -0.42
VAMP1-201ENST00000361716 MYLPFQ96A32 169 aa12.44□□□□□ -0.42
VAMP1-201ENST00000361716 PHF21AQ96BD5 680 aa12.44□□□□□ -0.42
VAMP1-201ENST00000361716 NACC2Q96BF6 587 aa12.44□□□□□ -0.42
VAMP1-201ENST00000361716 REXO5Q96IC2 774 aaKnown RBP12.44□□□□□ -0.42
VAMP1-201ENST00000361716 TPD52L3Q96J77 140 aa12.44□□□□□ -0.42
VAMP1-201ENST00000361716 RPRD1AQ96P16 312 aaPredicted RBP12.44□□□□□ -0.42
VAMP1-201ENST00000361716 CNPPD1Q9BV87 410 aa12.44□□□□□ -0.42
VAMP1-201ENST00000361716 CLPBQ9H078 707 aa12.44□□□□□ -0.42
VAMP1-201ENST00000361716 KRT84Q9NSB2 600 aa12.44□□□□□ -0.42
VAMP1-201ENST00000361716 TMEM30AQ9NV96 361 aa12.44□□□□□ -0.42
VAMP1-201ENST00000361716 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.44□□□□□ -0.42
VAMP1-201ENST00000361716 POLHQ9Y253 713 aa12.44□□□□□ -0.42
VAMP1-201ENST00000361716 PKP3Q9Y446 797 aa12.44□□□□□ -0.42
VAMP1-201ENST00000361716 METTL15A6NJ78 407 aa12.44□□□□□ -0.42
VAMP1-201ENST00000361716 NTRK1P04629 796 aa12.44□□□□□ -0.42
VAMP1-201ENST00000361716 IL7P13232 177 aa12.44□□□□□ -0.42
VAMP1-201ENST00000361716 PRKACAP17612 351 aa12.44□□□□□ -0.42
VAMP1-201ENST00000361716 HTR1EP28566 365 aa12.44□□□□□ -0.42
VAMP1-201ENST00000361716 MCCD1P59942 119 aaPredicted RBP12.44□□□□□ -0.42
VAMP1-201ENST00000361716 STARD3Q14849 445 aa12.44□□□□□ -0.42
VAMP1-201ENST00000361716 OR4D1Q15615 310 aa12.44□□□□□ -0.42
VAMP1-201ENST00000361716 TMEM207Q6UWW9 146 aa12.44□□□□□ -0.42
VAMP1-201ENST00000361716 TIGD4Q8IY51 512 aa12.44□□□□□ -0.42
VAMP1-201ENST00000361716 OR8H3Q8N146 312 aa12.44□□□□□ -0.42
VAMP1-201ENST00000361716 RASSF5Q8WWW0 418 aa12.44□□□□□ -0.42
VAMP1-201ENST00000361716 DEDD2Q8WXF8 326 aa12.44□□□□□ -0.42
VAMP1-201ENST00000361716 SLC38A4Q969I6 547 aa12.44□□□□□ -0.42
VAMP1-201ENST00000361716 MTERF3Q96E29 417 aa12.44□□□□□ -0.42
VAMP1-201ENST00000361716 YIPF6Q96EC8 236 aa12.44□□□□□ -0.42
VAMP1-201ENST00000361716 ST6GAL2Q96JF0 529 aa12.44□□□□□ -0.42
VAMP1-201ENST00000361716 BTN2A3PQ96KV6 586 aa12.44□□□□□ -0.42
VAMP1-201ENST00000361716 KCNC2Q96PR1 638 aa12.44□□□□□ -0.42
VAMP1-201ENST00000361716 TRMOQ9BU70 441 aa12.44□□□□□ -0.42
VAMP1-201ENST00000361716 ZNF224Q9NZL3 707 aa12.44□□□□□ -0.42
VAMP1-201ENST00000361716 VAPAQ9P0L0 249 aa12.44□□□□□ -0.42
VAMP1-201ENST00000361716 UBA2Q9UBT2 640 aaPredicted RBP12.44□□□□□ -0.42
VAMP1-201ENST00000361716 NPEPPSL1A6NEC2 478 aa12.43□□□□□ -0.42
VAMP1-201ENST00000361716 AREL1O15033 823 aa12.43□□□□□ -0.42
VAMP1-201ENST00000361716 CNPP09543 421 aaKnown RBP12.43□□□□□ -0.42
VAMP1-201ENST00000361716 KRT20P35900 424 aa12.43□□□□□ -0.42
VAMP1-201ENST00000361716 HNF4AP41235 474 aa12.43□□□□□ -0.42
VAMP1-201ENST00000361716 MVKQ03426 396 aa12.43□□□□□ -0.42
VAMP1-201ENST00000361716 OTUD1Q5VV17 481 aaPredicted RBP12.43□□□□□ -0.42
VAMP1-201ENST00000361716 KLHL17Q6TDP4 642 aa12.43□□□□□ -0.42
VAMP1-201ENST00000361716 ANGPTL8Q6UXH0 198 aa12.43□□□□□ -0.42
VAMP1-201ENST00000361716 UBQLNLQ8IYU4 475 aa12.43□□□□□ -0.42
VAMP1-201ENST00000361716 CRYBG2Q8N1P7 616 aa12.43□□□□□ -0.42
VAMP1-201ENST00000361716 C7orf57Q8NEG2 295 aa12.43□□□□□ -0.42
VAMP1-201ENST00000361716 ENKURQ8TC29 256 aa12.43□□□□□ -0.42
VAMP1-201ENST00000361716 ZBTB18Q99592 522 aa12.43□□□□□ -0.42
VAMP1-201ENST00000361716 SEMA3CQ99985 751 aa12.43□□□□□ -0.42
VAMP1-201ENST00000361716 SNTG1Q9NSN8 517 aa12.43□□□□□ -0.42
VAMP1-201ENST00000361716 SAMHD1Q9Y3Z3 626 aaKnown RBP12.43□□□□□ -0.42
VAMP1-201ENST00000361716 GPR45Q9Y5Y3 372 aa12.43□□□□□ -0.42
VAMP1-201ENST00000361716 ACTL7AQ9Y615 435 aa12.43□□□□□ -0.42
VAMP1-201ENST00000361716 ELOVL7A1L3X0 281 aa12.43□□□□□ -0.42
VAMP1-201ENST00000361716 CDC7O00311 574 aa12.43□□□□□ -0.42
VAMP1-201ENST00000361716 BTN3A3O00478 584 aa12.43□□□□□ -0.42
VAMP1-201ENST00000361716 NAT2P11245 290 aa12.43□□□□□ -0.42
VAMP1-201ENST00000361716 TGM4P49221 684 aa12.43□□□□□ -0.42
VAMP1-201ENST00000361716 RPL38P63173 70 aaKnown RBP12.43□□□□□ -0.42
VAMP1-201ENST00000361716 PTGR1Q14914 329 aa12.43□□□□□ -0.42
VAMP1-201ENST00000361716 MAPKAPK3Q16644 382 aa12.43□□□□□ -0.42
VAMP1-201ENST00000361716 FAM205BPQ63HN1 556 aa12.43□□□□□ -0.42
VAMP1-201ENST00000361716 LAIR1Q6GTX8 287 aa12.43□□□□□ -0.42
VAMP1-201ENST00000361716 LACC1Q8IV20 430 aa12.43□□□□□ -0.42
VAMP1-201ENST00000361716 ZDHHC21Q8IVQ6 265 aa12.43□□□□□ -0.42
VAMP1-201ENST00000361716 KBTBD8Q8NFY9 601 aa12.43□□□□□ -0.42
VAMP1-201ENST00000361716 OR5K1Q8NHB7 308 aa12.43□□□□□ -0.42
VAMP1-201ENST00000361716 PSMG2Q969U7 264 aa12.43□□□□□ -0.42
VAMP1-201ENST00000361716 MRPL9Q9BYD2 267 aaKnown RBP12.43□□□□□ -0.42
VAMP1-201ENST00000361716 MROH8Q9H579 483 aa12.43□□□□□ -0.42
VAMP1-201ENST00000361716 CATSPERBQ9H7T0 1116 aa12.43□□□□□ -0.42
VAMP1-201ENST00000361716 RCOR3Q9P2K3 495 aaPredicted RBP12.43□□□□□ -0.42
VAMP1-201ENST00000361716 PRG3Q9Y2Y8 225 aaPredicted RBP12.43□□□□□ -0.42
VAMP1-201ENST00000361716 TTC3P53804 2025 aa12.43□□□□□ -0.42
VAMP1-201ENST00000361716 LTBP3Q9NS15 1303 aa12.43□□□□□ -0.42
VAMP1-201ENST00000361716 A0A0X1KG70 313 aa12.43□□□□□ -0.42
VAMP1-201ENST00000361716 RPLP0P05388 317 aaKnown RBP12.43□□□□□ -0.42
VAMP1-201ENST00000361716 EFNA1P20827 205 aaPredicted RBP12.43□□□□□ -0.42
VAMP1-201ENST00000361716 ZNF45Q02386 682 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms