RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 CLIC1O00299 241 aa15.66■□□□□ 0.1
CLSTN1-201ENST00000361311 CCNB2O95067 398 aa15.66■□□□□ 0.1
CLSTN1-201ENST00000361311 IFNW1P05000 195 aa15.66■□□□□ 0.1
CLSTN1-201ENST00000361311 DARSP14868 501 aaKnown RBP15.66■□□□□ 0.1
CLSTN1-201ENST00000361311 GRK4P32298 578 aa15.66■□□□□ 0.1
CLSTN1-201ENST00000361311 YBEYP58557 167 aaPredicted RBP15.66■□□□□ 0.1
CLSTN1-201ENST00000361311 SLC10A7Q0GE19 358 aa15.66■□□□□ 0.1
CLSTN1-201ENST00000361311 ABHD18Q0P651 414 aa15.66■□□□□ 0.1
CLSTN1-201ENST00000361311 SPCS2Q15005 226 aa15.66■□□□□ 0.1
CLSTN1-201ENST00000361311 PARP15Q460N3 678 aa15.66■□□□□ 0.1
CLSTN1-201ENST00000361311 COQ5Q5HYK3 327 aa15.66■□□□□ 0.1
CLSTN1-201ENST00000361311 AARSD1Q9BTE6 412 aaKnown RBP15.66■□□□□ 0.1
CLSTN1-201ENST00000361311 MAF1Q9H063 256 aa15.66■□□□□ 0.1
CLSTN1-201ENST00000361311 BAIAP2Q9UQB8 552 aa15.66■□□□□ 0.1
CLSTN1-201ENST00000361311 KCTD3Q9Y597 815 aa15.66■□□□□ 0.1
CLSTN1-201ENST00000361311 EEDO75530 441 aaKnown RBP15.66■□□□□ 0.1
CLSTN1-201ENST00000361311 C22orf31O95567 290 aa15.66■□□□□ 0.1
CLSTN1-201ENST00000361311 ESR1P03372 595 aa15.66■□□□□ 0.1
CLSTN1-201ENST00000361311 PTX3P26022 381 aaPredicted RBP15.66■□□□□ 0.1
CLSTN1-201ENST00000361311 GSTM4Q03013 218 aa15.66■□□□□ 0.1
CLSTN1-201ENST00000361311 MAB21L1Q13394 359 aa15.66■□□□□ 0.1
CLSTN1-201ENST00000361311 E2F2Q14209 437 aa15.66■□□□□ 0.1
CLSTN1-201ENST00000361311 UBE2R2Q712K3 238 aaPredicted RBP15.66■□□□□ 0.1
CLSTN1-201ENST00000361311 CDKN2AIPNLQ96HQ2 116 aa15.66■□□□□ 0.1
CLSTN1-201ENST00000361311 BCL7BQ9BQE9 202 aa15.66■□□□□ 0.1
CLSTN1-201ENST00000361311 FNDC11Q9BVV2 318 aa15.66■□□□□ 0.1
CLSTN1-201ENST00000361311 EBPLQ9BY08 206 aa15.66■□□□□ 0.1
CLSTN1-201ENST00000361311 CIPCQ9C0C6 399 aa15.66■□□□□ 0.1
CLSTN1-201ENST00000361311 PRDM5Q9NQX1 630 aaPredicted RBP15.66■□□□□ 0.1
CLSTN1-201ENST00000361311 TUBB3Q13509 450 aa15.66■□□□□ 0.1
CLSTN1-201ENST00000361311 TAZQ16635 292 aa15.66■□□□□ 0.1
CLSTN1-201ENST00000361311 HKDC1Q2TB90 917 aa15.66■□□□□ 0.1
CLSTN1-201ENST00000361311 TAPT1Q6NXT6 567 aa15.66■□□□□ 0.1
CLSTN1-201ENST00000361311 SIPA1Q96FS4 1042 aa15.66■□□□□ 0.1
CLSTN1-201ENST00000361311 ALPK1Q96QP1 1244 aa15.66■□□□□ 0.1
CLSTN1-201ENST00000361311 IL4I1Q96RQ9 567 aa15.66■□□□□ 0.1
CLSTN1-201ENST00000361311 TM9SF3Q9HD45 589 aa15.66■□□□□ 0.1
CLSTN1-201ENST00000361311 A0A1W2PRG6 482 aa15.66■□□□□ 0.1
CLSTN1-201ENST00000361311 FAM92AA1XBS5 289 aa15.66■□□□□ 0.1
CLSTN1-201ENST00000361311 KPNA5O15131 536 aa15.66■□□□□ 0.1
CLSTN1-201ENST00000361311 PRAMEF1O95521 474 aa15.66■□□□□ 0.1
CLSTN1-201ENST00000361311 AGXTP21549 392 aa15.66■□□□□ 0.1
CLSTN1-201ENST00000361311 NOS3P29474 1203 aa15.66■□□□□ 0.1
CLSTN1-201ENST00000361311 SH3BP2P78314 561 aa15.66■□□□□ 0.1
CLSTN1-201ENST00000361311 RNASE12Q5GAN4 147 aaKnown RBP15.66■□□□□ 0.1
CLSTN1-201ENST00000361311 CERS6Q6ZMG9 384 aa15.66■□□□□ 0.1
CLSTN1-201ENST00000361311 LGI4Q8N135 537 aa15.66■□□□□ 0.1
CLSTN1-201ENST00000361311 BTN2A3PQ96KV6 586 aa15.66■□□□□ 0.1
CLSTN1-201ENST00000361311 TINF2Q9BSI4 451 aa15.66■□□□□ 0.1
CLSTN1-201ENST00000361311 PCDHGA3Q9Y5H0 932 aa15.66■□□□□ 0.1
CLSTN1-201ENST00000361311 TTC24A2A3L6 582 aaPredicted RBP15.65■□□□□ 0.1
CLSTN1-201ENST00000361311 SGTAO43765 313 aa15.65■□□□□ 0.1
CLSTN1-201ENST00000361311 UPK1BO75841 260 aa15.65■□□□□ 0.1
CLSTN1-201ENST00000361311 CYP3A5P20815 502 aa15.65■□□□□ 0.1
CLSTN1-201ENST00000361311 MYL9P24844 172 aa15.65■□□□□ 0.1
CLSTN1-201ENST00000361311 PPP2R2DQ66LE6 453 aa15.65■□□□□ 0.1
CLSTN1-201ENST00000361311 DESI1Q6ICB0 168 aa15.65■□□□□ 0.1
CLSTN1-201ENST00000361311 CDK5RAP1Q96SZ6 601 aaKnown RBP15.65■□□□□ 0.1
CLSTN1-201ENST00000361311 TRIT1Q9H3H1 467 aaKnown RBP15.65■□□□□ 0.1
CLSTN1-201ENST00000361311 MAP10Q9P2G4 905 aa15.65■□□□□ 0.1
CLSTN1-201ENST00000361311 PFDN2Q9UHV9 154 aa15.65■□□□□ 0.1
CLSTN1-201ENST00000361311 POU2F3Q9UKI9 436 aa15.65■□□□□ 0.1
CLSTN1-201ENST00000361311 PCDHGC4Q9Y5F7 938 aa15.65■□□□□ 0.1
CLSTN1-201ENST00000361311 PCDHGA8Q9Y5G5 932 aa15.65■□□□□ 0.1
CLSTN1-201ENST00000361311 ZNF142P52746 1687 aaPredicted RBP15.65■□□□□ 0.1
CLSTN1-201ENST00000361311 SOWAHBA6NEL2 793 aa15.65■□□□□ 0.1
CLSTN1-201ENST00000361311 FFAR2O15552 330 aa15.65■□□□□ 0.1
CLSTN1-201ENST00000361311 CNTN5O94779 1100 aa15.65■□□□□ 0.1
CLSTN1-201ENST00000361311 TEAD4Q15561 434 aa15.65■□□□□ 0.1
CLSTN1-201ENST00000361311 CYP4V2Q6ZWL3 525 aaPredicted RBP15.65■□□□□ 0.1
CLSTN1-201ENST00000361311 TEX47Q8TBZ9 253 aa15.65■□□□□ 0.1
CLSTN1-201ENST00000361311 TSPAN18Q96SJ8 248 aa15.65■□□□□ 0.1
CLSTN1-201ENST00000361311 TTYH1Q9H313 450 aaPredicted RBP15.65■□□□□ 0.1
CLSTN1-201ENST00000361311 GRIP1Q9Y3R0 1128 aa15.65■□□□□ 0.1
CLSTN1-201ENST00000361311 RAI2Q9Y5P3 530 aa15.65■□□□□ 0.1
CLSTN1-201ENST00000361311 KLRG2A4D1S0 409 aaPredicted RBP15.65■□□□□ 0.1
CLSTN1-201ENST00000361311 LCHNA4D1U4 455 aa15.65■□□□□ 0.1
CLSTN1-201ENST00000361311 ALDH1A1P00352 501 aa15.65■□□□□ 0.1
CLSTN1-201ENST00000361311 SMIM10L2AP0DMW4 78 aa15.65■□□□□ 0.1
CLSTN1-201ENST00000361311 SMIM10L2BP0DMW5 78 aa15.65■□□□□ 0.1
CLSTN1-201ENST00000361311 RPL3P39023 403 aaKnown RBP15.65■□□□□ 0.1
CLSTN1-201ENST00000361311 LEPRP48357 1165 aaKnown RBP15.65■□□□□ 0.1
CLSTN1-201ENST00000361311 RPIAP49247 311 aa15.65■□□□□ 0.1
CLSTN1-201ENST00000361311 PSEN2P49810 448 aa15.65■□□□□ 0.1
CLSTN1-201ENST00000361311 GRIK2Q13002 908 aa15.65■□□□□ 0.1
CLSTN1-201ENST00000361311 SIRPB2Q5JXA9 342 aa15.65■□□□□ 0.1
CLSTN1-201ENST00000361311 GCNT6Q5T4J0 391 aa15.65■□□□□ 0.1
CLSTN1-201ENST00000361311 LBX2Q6XYB7 198 aa15.65■□□□□ 0.1
CLSTN1-201ENST00000361311 FAM92BQ6ZTR7 304 aa15.65■□□□□ 0.1
CLSTN1-201ENST00000361311 OR4F6Q8NGB9 312 aa15.65■□□□□ 0.1
CLSTN1-201ENST00000361311 OR8J3Q8NGG0 315 aa15.65■□□□□ 0.1
CLSTN1-201ENST00000361311 VANGL1Q8TAA9 524 aaPredicted RBP15.65■□□□□ 0.1
CLSTN1-201ENST00000361311 ZNF675Q8TD23 568 aa15.65■□□□□ 0.1
CLSTN1-201ENST00000361311 MAGEB10Q96LZ2 347 aaPredicted RBP15.65■□□□□ 0.1
CLSTN1-201ENST00000361311 ERVK13-1Q9NX77 482 aa15.65■□□□□ 0.1
CLSTN1-201ENST00000361311 ARHGEF33A8MVX0 844 aa15.64■□□□□ 0.09
CLSTN1-201ENST00000361311 GADD45GO95257 159 aa15.64■□□□□ 0.09
CLSTN1-201ENST00000361311 INHBEP58166 350 aa15.64■□□□□ 0.09
CLSTN1-201ENST00000361311 SRSF11Q05519 484 aaKnown RBP15.64■□□□□ 0.09
CLSTN1-201ENST00000361311 DUS1LQ6P1R4 473 aaKnown RBP15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms