RNA–Protein interactions for RNA: ENST00000360046.9

HOXA4-201, Transcript of homeobox A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA4, Length 1,747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-201ENST00000360046 RPE65Q16518 533 aa21.28■■□□□ 1
HOXA4-201ENST00000360046 ATG14Q6ZNE5 492 aa21.28■■□□□ 1
HOXA4-201ENST00000360046 TBC1D21Q8IYX1 336 aa21.28■■□□□ 1
HOXA4-201ENST00000360046 OR9A1PQ8NGU1 263 aa21.28■■□□□ 1
HOXA4-201ENST00000360046 AGR3Q8TD06 166 aa21.28■■□□□ 1
HOXA4-201ENST00000360046 UBTD2Q8WUN7 234 aa21.28■■□□□ 1
HOXA4-201ENST00000360046 RAD51AP1Q96B01 352 aa21.28■■□□□ 1
HOXA4-201ENST00000360046 C1QTNF3Q9BXJ4 246 aa21.28■■□□□ 1
HOXA4-201ENST00000360046 ATG10Q9H0Y0 220 aa21.28■■□□□ 1
HOXA4-201ENST00000360046 SEMA4BQ9NPR2 832 aaPredicted RBP21.28■■□□□ 1
HOXA4-201ENST00000360046 TAAR2Q9P1P5 351 aa21.28■■□□□ 1
HOXA4-201ENST00000360046 STOX2Q9P2F5 926 aaPredicted RBP21.28■■□□□ 1
HOXA4-201ENST00000360046 OPTCQ9UBM4 332 aa21.28■■□□□ 1
HOXA4-201ENST00000360046 DNAH14Q0VDD8 3507 aa21.28■■□□□ 1
HOXA4-201ENST00000360046 ARHGEF17Q96PE2 2063 aaPredicted RBP21.27■■□□□ 1
HOXA4-201ENST00000360046 E2F3O00716 465 aa21.27■■□□□ 1
HOXA4-201ENST00000360046 STK16O75716 305 aa21.27■■□□□ 1
HOXA4-201ENST00000360046 FAM107AO95990 144 aa21.27■■□□□ 1
HOXA4-201ENST00000360046 MTHFD1P11586 935 aaKnown RBP21.27■■□□□ 1
HOXA4-201ENST00000360046 CLCQ05315 142 aa21.27■■□□□ 1
HOXA4-201ENST00000360046 ABRAXAS1Q6UWZ7 409 aa21.27■■□□□ 1
HOXA4-201ENST00000360046 WASH2PQ6VEQ5 465 aa21.27■■□□□ 1
HOXA4-201ENST00000360046 LSMEM2Q8N112 164 aa21.27■■□□□ 1
HOXA4-201ENST00000360046 TRPC4APQ8TEL6 797 aa21.27■■□□□ 1
HOXA4-201ENST00000360046 ZNF483Q8TF39 744 aaPredicted RBP21.27■■□□□ 1
HOXA4-201ENST00000360046 TRMOQ9BU70 441 aa21.27■■□□□ 1
HOXA4-201ENST00000360046 EML4Q9HC35 981 aaKnown RBP21.27■■□□□ 1
HOXA4-201ENST00000360046 WASH6PQ9NQA3 447 aa21.27■■□□□ 1
HOXA4-201ENST00000360046 MARCOQ9UEW3 520 aaPredicted RBP21.27■■□□□ 1
HOXA4-201ENST00000360046 PCOLCE2Q9UKZ9 415 aa21.27■■□□□ 1
HOXA4-201ENST00000360046 PLAGL1Q9UM63 463 aa21.27■■□□□ 1
HOXA4-201ENST00000360046 ANGPTL3Q9Y5C1 460 aa21.27■■□□□ 1
HOXA4-201ENST00000360046 KITP10721 976 aa21.26■□□□□ 0.99
HOXA4-201ENST00000360046 F3P13726 295 aa21.26■□□□□ 0.99
HOXA4-201ENST00000360046 ELOCQ15369 112 aa21.26■□□□□ 0.99
HOXA4-201ENST00000360046 RBBP7Q16576 425 aa21.26■□□□□ 0.99
HOXA4-201ENST00000360046 AGTRAPQ6RW13 159 aa21.26■□□□□ 0.99
HOXA4-201ENST00000360046 TEX9Q8N6V9 391 aa21.26■□□□□ 0.99
HOXA4-201ENST00000360046 BCAS4Q8TDM0 211 aa21.26■□□□□ 0.99
HOXA4-201ENST00000360046 PYCR2Q96C36 320 aa21.26■□□□□ 0.99
HOXA4-201ENST00000360046 THOC1Q96FV9 657 aaKnown RBP21.26■□□□□ 0.99
HOXA4-201ENST00000360046 MED8Q96G25 268 aa21.26■□□□□ 0.99
HOXA4-201ENST00000360046 LRFN3Q9BTN0 628 aa21.26■□□□□ 0.99
HOXA4-201ENST00000360046 ILKAPQ9H0C8 392 aaPredicted RBP21.26■□□□□ 0.99
HOXA4-201ENST00000360046 HEBP2Q9Y5Z4 205 aa21.26■□□□□ 0.99
HOXA4-201ENST00000360046 CACNA1EQ15878 2313 aa21.26■□□□□ 0.99
HOXA4-201ENST00000360046 TRBV23OR9-2A0A075B6M9 112 aa21.26■□□□□ 0.99
HOXA4-201ENST00000360046 MPSTP25325 297 aa21.26■□□□□ 0.99
HOXA4-201ENST00000360046 IMPA1P29218 277 aa21.26■□□□□ 0.99
HOXA4-201ENST00000360046 GGT5P36269 586 aa21.26■□□□□ 0.99
HOXA4-201ENST00000360046 NAA20P61599 178 aa21.26■□□□□ 0.99
HOXA4-201ENST00000360046 DMTNQ08495 405 aa21.26■□□□□ 0.99
HOXA4-201ENST00000360046 LCP2Q13094 533 aa21.26■□□□□ 0.99
HOXA4-201ENST00000360046 GTF2H2Q13888 395 aa21.26■□□□□ 0.99
HOXA4-201ENST00000360046 KIF19Q2TAC6 998 aa21.26■□□□□ 0.99
HOXA4-201ENST00000360046 PTCHD3Q3KNS1 767 aa21.26■□□□□ 0.99
HOXA4-201ENST00000360046 GTF2H2CQ6P1K8 395 aa21.26■□□□□ 0.99
HOXA4-201ENST00000360046 SYTL1Q8IYJ3 562 aa21.26■□□□□ 0.99
HOXA4-201ENST00000360046 ZNF781Q8N8C0 355 aa21.26■□□□□ 0.99
HOXA4-201ENST00000360046 LMX1AQ8TE12 382 aa21.26■□□□□ 0.99
HOXA4-201ENST00000360046 RAP2CQ9Y3L5 183 aa21.26■□□□□ 0.99
HOXA4-201ENST00000360046 PI4KAP42356 2102 aa21.25■□□□□ 0.99
HOXA4-201ENST00000360046 A6NCN8 305 aa21.25■□□□□ 0.99
HOXA4-201ENST00000360046 K7EPI3 171 aa21.25■□□□□ 0.99
HOXA4-201ENST00000360046 NDUFAB1O14561 156 aa21.25■□□□□ 0.99
HOXA4-201ENST00000360046 WDR47O94967 919 aa21.25■□□□□ 0.99
HOXA4-201ENST00000360046 CFIP05156 583 aa21.25■□□□□ 0.99
HOXA4-201ENST00000360046 SLC6A12P48065 614 aa21.25■□□□□ 0.99
HOXA4-201ENST00000360046 HNRNPKP61978 463 aaKnown RBP eCLIP21.25■□□□□ 0.99
HOXA4-201ENST00000360046 PRKAA1Q13131 559 aa21.25■□□□□ 0.99
HOXA4-201ENST00000360046 ZXDCQ2QGD7 858 aaPredicted RBP21.25■□□□□ 0.99
HOXA4-201ENST00000360046 CGB2Q6NT52 195 aa21.25■□□□□ 0.99
HOXA4-201ENST00000360046 ZC3H14Q6PJT7 736 aaKnown RBP21.25■□□□□ 0.99
HOXA4-201ENST00000360046 GOLGA7Q7Z5G4 137 aa21.25■□□□□ 0.99
HOXA4-201ENST00000360046 CUZD1Q86UP6 607 aa21.25■□□□□ 0.99
HOXA4-201ENST00000360046 PPFIBP2Q8ND30 876 aa21.25■□□□□ 0.99
HOXA4-201ENST00000360046 ZNF480Q8WV37 535 aa21.25■□□□□ 0.99
HOXA4-201ENST00000360046 CXorf40BQ96DE9 158 aa21.25■□□□□ 0.99
HOXA4-201ENST00000360046 ELAC2Q9BQ52 826 aaKnown RBP21.25■□□□□ 0.99
HOXA4-201ENST00000360046 MVB12BQ9H7P6 319 aa21.25■□□□□ 0.99
HOXA4-201ENST00000360046 NPHS2Q9NP85 383 aa21.25■□□□□ 0.99
HOXA4-201ENST00000360046 ABCF3Q9NUQ8 709 aa21.25■□□□□ 0.99
HOXA4-201ENST00000360046 SPASTQ9UBP0 616 aa21.25■□□□□ 0.99
HOXA4-201ENST00000360046 SNX11Q9Y5W9 270 aa21.25■□□□□ 0.99
HOXA4-201ENST00000360046 SNUPNO95149 360 aaKnown RBP21.24■□□□□ 0.99
HOXA4-201ENST00000360046 TROVE2P10155 538 aaKnown RBP eCLIP21.24■□□□□ 0.99
HOXA4-201ENST00000360046 ARL1P40616 181 aaPredicted RBP21.24■□□□□ 0.99
HOXA4-201ENST00000360046 NAE1Q13564 534 aa21.24■□□□□ 0.99
HOXA4-201ENST00000360046 TSTA3Q13630 321 aaPredicted RBP21.24■□□□□ 0.99
HOXA4-201ENST00000360046 GRB7Q14451 532 aa21.24■□□□□ 0.99
HOXA4-201ENST00000360046 METTL2BQ6P1Q9 378 aaKnown RBP21.24■□□□□ 0.99
HOXA4-201ENST00000360046 LRRC70Q7Z2Q7 622 aa21.24■□□□□ 0.99
HOXA4-201ENST00000360046 FAM46DQ8NEK8 389 aa21.24■□□□□ 0.99
HOXA4-201ENST00000360046 GRAMD1AQ96CP6 724 aa21.24■□□□□ 0.99
HOXA4-201ENST00000360046 IL17FQ96PD4 163 aa21.24■□□□□ 0.99
HOXA4-201ENST00000360046 SLC32A1Q9H598 525 aa21.24■□□□□ 0.99
HOXA4-201ENST00000360046 ZBTB26Q9HCK0 441 aa21.24■□□□□ 0.99
HOXA4-201ENST00000360046 MID1IP1Q9NPA3 183 aa21.24■□□□□ 0.99
HOXA4-201ENST00000360046 PNPOQ9NVS9 261 aa21.24■□□□□ 0.99
HOXA4-201ENST00000360046 POLG2Q9UHN1 485 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms