RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 NFKBIL1Q9UBC1 381 aaPredicted RBP13.55□□□□□ -0.24
CSNK1E-201ENST00000359867 RIMS3Q9UJD0 308 aa13.55□□□□□ -0.24
CSNK1E-201ENST00000359867 OARD1Q9Y530 152 aa13.55□□□□□ -0.24
CSNK1E-201ENST00000359867 NCF1BA6NI72 391 aaPredicted RBP13.55□□□□□ -0.24
CSNK1E-201ENST00000359867 NCF1CA8MVU1 366 aaPredicted RBP13.55□□□□□ -0.24
CSNK1E-201ENST00000359867 UPK3BL1B0FP48 263 aa13.55□□□□□ -0.24
CSNK1E-201ENST00000359867 UPK3BL2E5RIL1 263 aa13.55□□□□□ -0.24
CSNK1E-201ENST00000359867 C1QTNF3-AMACRE9PGA6 284 aa13.55□□□□□ -0.24
CSNK1E-201ENST00000359867 E2F3O00716 465 aa13.55□□□□□ -0.24
CSNK1E-201ENST00000359867 UROSP10746 265 aa13.55□□□□□ -0.24
CSNK1E-201ENST00000359867 NCF1P14598 390 aaPredicted RBP13.55□□□□□ -0.24
CSNK1E-201ENST00000359867 XPAP23025 273 aaPredicted RBP13.55□□□□□ -0.24
CSNK1E-201ENST00000359867 ITGB7P26010 798 aa13.55□□□□□ -0.24
CSNK1E-201ENST00000359867 AGTR2P50052 363 aa13.55□□□□□ -0.24
CSNK1E-201ENST00000359867 CCR3P51677 355 aa13.55□□□□□ -0.24
CSNK1E-201ENST00000359867 CNTN1Q12860 1018 aa13.55□□□□□ -0.24
CSNK1E-201ENST00000359867 STX5Q13190 355 aa13.55□□□□□ -0.24
CSNK1E-201ENST00000359867 PTK2BQ14289 1009 aa13.55□□□□□ -0.24
CSNK1E-201ENST00000359867 NRF1Q16656 503 aa13.55□□□□□ -0.24
CSNK1E-201ENST00000359867 PIGGQ5H8A4 983 aa13.55□□□□□ -0.24
CSNK1E-201ENST00000359867 KLHL35Q6PF15 583 aa13.55□□□□□ -0.24
CSNK1E-201ENST00000359867 SLC2A7Q6PXP3 512 aa13.55□□□□□ -0.24
CSNK1E-201ENST00000359867 AMIGO2Q86SJ2 522 aa13.55□□□□□ -0.24
CSNK1E-201ENST00000359867 CHCHD4Q8N4Q1 142 aa13.55□□□□□ -0.24
CSNK1E-201ENST00000359867 AADATQ8N5Z0 425 aa13.55□□□□□ -0.24
CSNK1E-201ENST00000359867 OR2T3Q8NH03 318 aa13.55□□□□□ -0.24
CSNK1E-201ENST00000359867 SHDQ96IW2 340 aa13.55□□□□□ -0.24
CSNK1E-201ENST00000359867 SERPINI1Q99574 410 aa13.55□□□□□ -0.24
CSNK1E-201ENST00000359867 MMP17Q9ULZ9 603 aa13.55□□□□□ -0.24
CSNK1E-201ENST00000359867 MRPS17Q9Y2R5 130 aaKnown RBP13.55□□□□□ -0.24
CSNK1E-201ENST00000359867 TTC28Q96AY4 2481 aa13.54□□□□□ -0.24
CSNK1E-201ENST00000359867 PSMD12O00232 456 aaPredicted RBP13.54□□□□□ -0.24
CSNK1E-201ENST00000359867 GIPC1O14908 333 aa13.54□□□□□ -0.24
CSNK1E-201ENST00000359867 DENRO43583 198 aaKnown RBP13.54□□□□□ -0.24
CSNK1E-201ENST00000359867 CRCPO75575 148 aa13.54□□□□□ -0.24
CSNK1E-201ENST00000359867 OR56A5P0C7T3 313 aa13.54□□□□□ -0.24
CSNK1E-201ENST00000359867 PORP16435 677 aaPredicted RBP13.54□□□□□ -0.24
CSNK1E-201ENST00000359867 HALP42357 657 aa13.54□□□□□ -0.24
CSNK1E-201ENST00000359867 RPL5P46777 297 aaKnown RBP13.54□□□□□ -0.24
CSNK1E-201ENST00000359867 ACADVLP49748 655 aa13.54□□□□□ -0.24
CSNK1E-201ENST00000359867 PPP1R3AQ16821 1122 aa13.54□□□□□ -0.24
CSNK1E-201ENST00000359867 METTL2BQ6P1Q9 378 aaKnown RBP13.54□□□□□ -0.24
CSNK1E-201ENST00000359867 GK5Q6ZS86 529 aa13.54□□□□□ -0.24
CSNK1E-201ENST00000359867 ZFP28Q8NHY6 868 aa13.54□□□□□ -0.24
CSNK1E-201ENST00000359867 DGCR14Q96DF8 476 aaKnown RBP13.54□□□□□ -0.24
CSNK1E-201ENST00000359867 C3orf30Q96M34 536 aa13.54□□□□□ -0.24
CSNK1E-201ENST00000359867 ZNF382Q96SR6 550 aa13.54□□□□□ -0.24
CSNK1E-201ENST00000359867 AKTIPQ9H8T0 292 aa13.54□□□□□ -0.24
CSNK1E-201ENST00000359867 RDH14Q9HBH5 336 aa13.54□□□□□ -0.24
CSNK1E-201ENST00000359867 CD93Q9NPY3 652 aa13.54□□□□□ -0.24
CSNK1E-201ENST00000359867 DYRK4Q9NR20 520 aa13.54□□□□□ -0.24
CSNK1E-201ENST00000359867 UTP6Q9NYH9 597 aaKnown RBP13.54□□□□□ -0.24
CSNK1E-201ENST00000359867 A0A1W2PP55 124 aa13.54□□□□□ -0.24
CSNK1E-201ENST00000359867 PIP5K1BO14986 540 aa13.54□□□□□ -0.24
CSNK1E-201ENST00000359867 FFAR2O15552 330 aa13.54□□□□□ -0.24
CSNK1E-201ENST00000359867 SPINT1O43278 529 aa13.54□□□□□ -0.24
CSNK1E-201ENST00000359867 CHEK2O96017 543 aa13.54□□□□□ -0.24
CSNK1E-201ENST00000359867 PDGFBP01127 241 aaPredicted RBP13.54□□□□□ -0.24
CSNK1E-201ENST00000359867 GSTT2P0CG29 244 aa13.54□□□□□ -0.24
CSNK1E-201ENST00000359867 GSTT2BP0CG30 244 aa13.54□□□□□ -0.24
CSNK1E-201ENST00000359867 ITGB6P18564 788 aa13.54□□□□□ -0.24
CSNK1E-201ENST00000359867 DRD3P35462 400 aa13.54□□□□□ -0.24
CSNK1E-201ENST00000359867 RPS14P62263 151 aaKnown RBP13.54□□□□□ -0.24
CSNK1E-201ENST00000359867 ART3Q13508 389 aa13.54□□□□□ -0.24
CSNK1E-201ENST00000359867 TMEM259Q4ZIN3 620 aa13.54□□□□□ -0.24
CSNK1E-201ENST00000359867 EOGTQ5NDL2 527 aa13.54□□□□□ -0.24
CSNK1E-201ENST00000359867 PGAM4Q8N0Y7 254 aa13.54□□□□□ -0.24
CSNK1E-201ENST00000359867 TCRBV21S2A2A0A5A6 115 aa13.53□□□□□ -0.24
CSNK1E-201ENST00000359867 ADRB3P13945 408 aa13.53□□□□□ -0.24
CSNK1E-201ENST00000359867 PCSK6P29122 969 aa13.53□□□□□ -0.24
CSNK1E-201ENST00000359867 P2RY2P41231 377 aa13.53□□□□□ -0.24
CSNK1E-201ENST00000359867 PSMD7P51665 324 aa13.53□□□□□ -0.24
CSNK1E-201ENST00000359867 FOXA1P55317 472 aa13.53□□□□□ -0.24
CSNK1E-201ENST00000359867 STX1BP61266 288 aa13.53□□□□□ -0.24
CSNK1E-201ENST00000359867 FASTKQ14296 549 aaKnown RBP13.53□□□□□ -0.24
CSNK1E-201ENST00000359867 ZNF776Q68DI1 518 aaPredicted RBP13.53□□□□□ -0.24
CSNK1E-201ENST00000359867 RFLNAQ6ZTI6 216 aa13.53□□□□□ -0.24
CSNK1E-201ENST00000359867 DPPA4Q7L190 304 aa13.53□□□□□ -0.24
CSNK1E-201ENST00000359867 SYVN1Q86TM6 617 aa13.53□□□□□ -0.24
CSNK1E-201ENST00000359867 ATP6V1E2Q96A05 226 aa13.53□□□□□ -0.24
CSNK1E-201ENST00000359867 PPP1R16AQ96I34 528 aa13.53□□□□□ -0.24
CSNK1E-201ENST00000359867 WRAP53Q9BUR4 548 aaKnown RBP13.53□□□□□ -0.24
CSNK1E-201ENST00000359867 FAM83DQ9H4H8 585 aa13.53□□□□□ -0.24
CSNK1E-201ENST00000359867 Q9H521 79 aa13.53□□□□□ -0.24
CSNK1E-201ENST00000359867 ADA2Q9NZK5 511 aa13.53□□□□□ -0.24
CSNK1E-201ENST00000359867 PTBP2Q9UKA9 531 aaKnown RBP13.53□□□□□ -0.24
CSNK1E-201ENST00000359867 TMED5Q9Y3A6 229 aa13.53□□□□□ -0.24
CSNK1E-201ENST00000359867 AP1G1O43747 822 aa13.53□□□□□ -0.24
CSNK1E-201ENST00000359867 RNASEH2AO75792 299 aaKnown RBP13.53□□□□□ -0.24
CSNK1E-201ENST00000359867 DCNP07585 359 aaKnown RBP13.53□□□□□ -0.24
CSNK1E-201ENST00000359867 LBPP18428 481 aa13.53□□□□□ -0.24
CSNK1E-201ENST00000359867 B4GALNT1Q00973 533 aa13.53□□□□□ -0.24
CSNK1E-201ENST00000359867 RBBP7Q16576 425 aa13.53□□□□□ -0.24
CSNK1E-201ENST00000359867 TMEM31Q5JXX7 168 aa13.53□□□□□ -0.24
CSNK1E-201ENST00000359867 CDKL4Q5MAI5 379 aa13.53□□□□□ -0.24
CSNK1E-201ENST00000359867 FAM46CQ5VWP2 391 aa13.53□□□□□ -0.24
CSNK1E-201ENST00000359867 THOC7Q6I9Y2 204 aaKnown RBP13.53□□□□□ -0.24
CSNK1E-201ENST00000359867 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.53□□□□□ -0.24
CSNK1E-201ENST00000359867 GPRIN3Q6ZVF9 776 aa13.53□□□□□ -0.24
CSNK1E-201ENST00000359867 ERN2Q76MJ5 926 aaKnown RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms