RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 ACP5P13686 325 aa13.49□□□□□ -0.25
PDLIM5-203ENST00000359265 SERPINB3P29508 390 aa13.49□□□□□ -0.25
PDLIM5-203ENST00000359265 GGT5P36269 586 aa13.49□□□□□ -0.25
PDLIM5-203ENST00000359265 IDH3AP50213 366 aa13.49□□□□□ -0.25
PDLIM5-203ENST00000359265 THOP1P52888 689 aa13.49□□□□□ -0.25
PDLIM5-203ENST00000359265 DMTNQ08495 405 aa13.49□□□□□ -0.25
PDLIM5-203ENST00000359265 PDCD2Q16342 344 aaPredicted RBP13.49□□□□□ -0.25
PDLIM5-203ENST00000359265 C18orf21Q32NC0 220 aaPredicted RBP13.49□□□□□ -0.25
PDLIM5-203ENST00000359265 ZNF528Q3MIS6 628 aa13.49□□□□□ -0.25
PDLIM5-203ENST00000359265 EPGNQ6UW88 154 aa13.49□□□□□ -0.25
PDLIM5-203ENST00000359265 XKR5Q6UX68 686 aa13.49□□□□□ -0.25
PDLIM5-203ENST00000359265 GCNT7Q6ZNI0 430 aa13.49□□□□□ -0.25
PDLIM5-203ENST00000359265 FAM83HQ6ZRV2 1179 aaPredicted RBP13.49□□□□□ -0.25
PDLIM5-203ENST00000359265 ACAD11Q709F0 780 aa13.49□□□□□ -0.25
PDLIM5-203ENST00000359265 GOLGA7Q7Z5G4 137 aa13.49□□□□□ -0.25
PDLIM5-203ENST00000359265 YTHDF3Q7Z739 585 aaKnown RBP13.49□□□□□ -0.25
PDLIM5-203ENST00000359265 HOMEZQ8IX15 550 aa13.49□□□□□ -0.25
PDLIM5-203ENST00000359265 CLYBLQ8N0X4 340 aa13.49□□□□□ -0.25
PDLIM5-203ENST00000359265 TEX9Q8N6V9 391 aa13.49□□□□□ -0.25
PDLIM5-203ENST00000359265 CADM4Q8NFZ8 388 aa13.49□□□□□ -0.25
PDLIM5-203ENST00000359265 FAM174AQ8TBP5 190 aa13.49□□□□□ -0.25
PDLIM5-203ENST00000359265 MAGEC3Q8TD91 643 aa13.49□□□□□ -0.25
PDLIM5-203ENST00000359265 RLN3Q8WXF3 142 aa13.49□□□□□ -0.25
PDLIM5-203ENST00000359265 CCT6BQ92526 530 aa13.49□□□□□ -0.25
PDLIM5-203ENST00000359265 ESAMQ96AP7 390 aa13.49□□□□□ -0.25
PDLIM5-203ENST00000359265 ERP27Q96DN0 273 aa13.49□□□□□ -0.25
PDLIM5-203ENST00000359265 SCARF2Q96GP6 870 aaPredicted RBP13.49□□□□□ -0.25
PDLIM5-203ENST00000359265 CCDC138Q96M89 665 aa13.49□□□□□ -0.25
PDLIM5-203ENST00000359265 OR2M4Q96R27 311 aa13.49□□□□□ -0.25
PDLIM5-203ENST00000359265 EBF4Q9BQW3 602 aa13.49□□□□□ -0.25
PDLIM5-203ENST00000359265 NUSAP1Q9BXS6 441 aaKnown RBP13.49□□□□□ -0.25
PDLIM5-203ENST00000359265 OR52A5Q9H2C5 316 aa13.49□□□□□ -0.25
PDLIM5-203ENST00000359265 ZFP69BQ9UJL9 534 aa13.49□□□□□ -0.25
PDLIM5-203ENST00000359265 ACSL5Q9ULC5 683 aa13.49□□□□□ -0.25
PDLIM5-203ENST00000359265 TRAF6Q9Y4K3 522 aa13.49□□□□□ -0.25
PDLIM5-203ENST00000359265 ASB1Q9Y576 335 aa13.49□□□□□ -0.25
PDLIM5-203ENST00000359265 CNOT1A5YKK6 2376 aaKnown RBP13.49□□□□□ -0.25
PDLIM5-203ENST00000359265 TMEM233B4DJY2 109 aa13.48□□□□□ -0.25
PDLIM5-203ENST00000359265 IFRD1O00458 451 aaPredicted RBP13.48□□□□□ -0.25
PDLIM5-203ENST00000359265 TNFRSF10CO14798 259 aa13.48□□□□□ -0.25
PDLIM5-203ENST00000359265 HGSO14964 777 aaPredicted RBP13.48□□□□□ -0.25
PDLIM5-203ENST00000359265 AZIN1O14977 448 aa13.48□□□□□ -0.25
PDLIM5-203ENST00000359265 GDF9O60383 454 aa13.48□□□□□ -0.25
PDLIM5-203ENST00000359265 KATNA1O75449 491 aa13.48□□□□□ -0.25
PDLIM5-203ENST00000359265 SKAP2O75563 359 aaPredicted RBP13.48□□□□□ -0.25
PDLIM5-203ENST00000359265 STK16O75716 305 aa13.48□□□□□ -0.25
PDLIM5-203ENST00000359265 ESRRBO95718 433 aa13.48□□□□□ -0.25
PDLIM5-203ENST00000359265 OTCP00480 354 aa13.48□□□□□ -0.25
PDLIM5-203ENST00000359265 RPN2P04844 631 aa13.48□□□□□ -0.25
PDLIM5-203ENST00000359265 FGF4P08620 206 aa13.48□□□□□ -0.25
PDLIM5-203ENST00000359265 SLC35G4P0C7Q5 338 aa13.48□□□□□ -0.25
PDLIM5-203ENST00000359265 ARL1P40616 181 aaPredicted RBP13.48□□□□□ -0.25
PDLIM5-203ENST00000359265 GNPDA1P46926 289 aa13.48□□□□□ -0.25
PDLIM5-203ENST00000359265 RABIFP47224 123 aa13.48□□□□□ -0.25
PDLIM5-203ENST00000359265 PXNP49023 591 aaPredicted RBP13.48□□□□□ -0.25
PDLIM5-203ENST00000359265 CCNG1P51959 295 aa13.48□□□□□ -0.25
PDLIM5-203ENST00000359265 INHBCP55103 352 aa13.48□□□□□ -0.25
PDLIM5-203ENST00000359265 SH3BP2P78314 561 aa13.48□□□□□ -0.25
PDLIM5-203ENST00000359265 CDC16Q13042 620 aa13.48□□□□□ -0.25
PDLIM5-203ENST00000359265 PYCR3Q53H96 274 aa13.48□□□□□ -0.25
PDLIM5-203ENST00000359265 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.48□□□□□ -0.25
PDLIM5-203ENST00000359265 KANK2Q63ZY3 851 aa13.48□□□□□ -0.25
PDLIM5-203ENST00000359265 METRNLQ641Q3 311 aa13.48□□□□□ -0.25
PDLIM5-203ENST00000359265 ENPP7Q6UWV6 458 aa13.48□□□□□ -0.25
PDLIM5-203ENST00000359265 CHST15Q7LFX5 561 aaPredicted RBP13.48□□□□□ -0.25
PDLIM5-203ENST00000359265 SYVN1Q86TM6 617 aa13.48□□□□□ -0.25
PDLIM5-203ENST00000359265 C11orf74Q86VG3 221 aa13.48□□□□□ -0.25
PDLIM5-203ENST00000359265 TMEM145Q8NBT3 493 aa13.48□□□□□ -0.25
PDLIM5-203ENST00000359265 ZBTB44Q8NCP5 570 aa13.48□□□□□ -0.25
PDLIM5-203ENST00000359265 MAPK15Q8TD08 544 aa13.48□□□□□ -0.25
PDLIM5-203ENST00000359265 NETO1Q8TDF5 533 aa13.48□□□□□ -0.25
PDLIM5-203ENST00000359265 SNX19Q92543 992 aa13.48□□□□□ -0.25
PDLIM5-203ENST00000359265 ATP6V1E2Q96A05 226 aa13.48□□□□□ -0.25
PDLIM5-203ENST00000359265 BIRC7Q96CA5 298 aa13.48□□□□□ -0.25
PDLIM5-203ENST00000359265 BMFQ96LC9 184 aa13.48□□□□□ -0.25
PDLIM5-203ENST00000359265 CCDC28BQ9BUN5 200 aa13.48□□□□□ -0.25
PDLIM5-203ENST00000359265 NUF2Q9BZD4 464 aa13.48□□□□□ -0.25
PDLIM5-203ENST00000359265 MYLK2Q9H1R3 596 aa13.48□□□□□ -0.25
PDLIM5-203ENST00000359265 SLC32A1Q9H598 525 aa13.48□□□□□ -0.25
PDLIM5-203ENST00000359265 NOL11Q9H8H0 719 aaKnown RBP13.48□□□□□ -0.25
PDLIM5-203ENST00000359265 ZBTB26Q9HCK0 441 aa13.48□□□□□ -0.25
PDLIM5-203ENST00000359265 FGF22Q9HCT0 170 aa13.48□□□□□ -0.25
PDLIM5-203ENST00000359265 TCF7L2Q9NQB0 619 aa13.48□□□□□ -0.25
PDLIM5-203ENST00000359265 KLQ9UEF7 1012 aa13.48□□□□□ -0.25
PDLIM5-203ENST00000359265 SLC23A2Q9UGH3 650 aa13.48□□□□□ -0.25
PDLIM5-203ENST00000359265 SUFUQ9UMX1 484 aa13.48□□□□□ -0.25
PDLIM5-203ENST00000359265 CA5BQ9Y2D0 317 aa13.48□□□□□ -0.25
PDLIM5-203ENST00000359265 GPSM3Q9Y4H4 160 aa13.48□□□□□ -0.25
PDLIM5-203ENST00000359265 FLNBO75369 2602 aaKnown RBP13.48□□□□□ -0.25
PDLIM5-203ENST00000359265 PCM1Q15154 2024 aa13.47□□□□□ -0.25
PDLIM5-203ENST00000359265 H0Y8X5 98 aa13.47□□□□□ -0.25
PDLIM5-203ENST00000359265 FCHO1O14526 889 aa13.47□□□□□ -0.25
PDLIM5-203ENST00000359265 MAP3K13O43283 966 aa13.47□□□□□ -0.25
PDLIM5-203ENST00000359265 WDR47O94967 919 aa13.47□□□□□ -0.25
PDLIM5-203ENST00000359265 C1orf105O95561 183 aa13.47□□□□□ -0.25
PDLIM5-203ENST00000359265 CHEK2O96017 543 aa13.47□□□□□ -0.25
PDLIM5-203ENST00000359265 ENO1P06733 434 aaKnown RBP13.47□□□□□ -0.25
PDLIM5-203ENST00000359265 SERPINA6P08185 405 aa13.47□□□□□ -0.25
PDLIM5-203ENST00000359265 EPB42P16452 691 aa13.47□□□□□ -0.25
PDLIM5-203ENST00000359265 ACADLP28330 430 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms