RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 TBC1D3HP0C7X1 549 aa13.45□□□□□ -0.26
VCP-201ENST00000358901 ZNF33AQ06730 810 aa13.45□□□□□ -0.26
VCP-201ENST00000358901 CHRNA6Q15825 494 aa13.45□□□□□ -0.26
VCP-201ENST00000358901 TBC1D3GQ6DHY5 549 aa13.45□□□□□ -0.26
VCP-201ENST00000358901 TBC1D3CQ6IPX1 549 aa13.45□□□□□ -0.26
VCP-201ENST00000358901 CXorf57Q6NSI4 855 aaKnown RBP13.45□□□□□ -0.26
VCP-201ENST00000358901 CHST15Q7LFX5 561 aaPredicted RBP13.45□□□□□ -0.26
VCP-201ENST00000358901 TBC1D3Q8IZP1 549 aaPredicted RBP13.45□□□□□ -0.26
VCP-201ENST00000358901 YTHDF1Q9BYJ9 559 aaKnown RBP13.45□□□□□ -0.26
VCP-201ENST00000358901 PHPT1Q9NRX4 125 aaPredicted RBP13.45□□□□□ -0.26
VCP-201ENST00000358901 OSER1Q9NX31 292 aa13.45□□□□□ -0.26
VCP-201ENST00000358901 SOHLH2Q9NX45 425 aa13.45□□□□□ -0.26
VCP-201ENST00000358901 VPS29Q9UBQ0 182 aa13.45□□□□□ -0.26
VCP-201ENST00000358901 LOC730098B7Z3J9 87 aa13.45□□□□□ -0.26
VCP-201ENST00000358901 CACNB4O00305 520 aaPredicted RBP13.45□□□□□ -0.26
VCP-201ENST00000358901 IL7RP16871 459 aa13.45□□□□□ -0.26
VCP-201ENST00000358901 LAG3P18627 525 aa13.45□□□□□ -0.26
VCP-201ENST00000358901 RPL26P61254 145 aaKnown RBP13.45□□□□□ -0.26
VCP-201ENST00000358901 TIGD6Q17RP2 521 aa13.45□□□□□ -0.26
VCP-201ENST00000358901 ZNF678Q5SXM1 525 aa13.45□□□□□ -0.26
VCP-201ENST00000358901 C14orf80Q86SX3 495 aa13.45□□□□□ -0.26
VCP-201ENST00000358901 FAM98AQ8NCA5 519 aaKnown RBP13.45□□□□□ -0.26
VCP-201ENST00000358901 MOSPD2Q8NHP6 518 aa13.45□□□□□ -0.26
VCP-201ENST00000358901 FAM110BQ8TC76 370 aa13.45□□□□□ -0.26
VCP-201ENST00000358901 DPF3Q92784 378 aa13.45□□□□□ -0.26
VCP-201ENST00000358901 ACDQ96AP0 544 aa13.45□□□□□ -0.26
VCP-201ENST00000358901 POLR2J2Q9GZM3 115 aaKnown RBP13.45□□□□□ -0.26
VCP-201ENST00000358901 SLC22A14Q9Y267 594 aa13.45□□□□□ -0.26
VCP-201ENST00000358901 OR1F1O43749 312 aa13.44□□□□□ -0.26
VCP-201ENST00000358901 RNASEH2AO75792 299 aaKnown RBP13.44□□□□□ -0.26
VCP-201ENST00000358901 BEST1O76090 585 aa13.44□□□□□ -0.26
VCP-201ENST00000358901 C8BP07358 591 aa13.44□□□□□ -0.26
VCP-201ENST00000358901 ANXA8P13928 327 aa13.44□□□□□ -0.26
VCP-201ENST00000358901 ENGP17813 658 aa13.44□□□□□ -0.26
VCP-201ENST00000358901 DNAJB1P25685 340 aa13.44□□□□□ -0.26
VCP-201ENST00000358901 LGALS3BPQ08380 585 aa13.44□□□□□ -0.26
VCP-201ENST00000358901 GANABQ14697 944 aaKnown RBP13.44□□□□□ -0.26
VCP-201ENST00000358901 RBM48Q5RL73 367 aaKnown RBP13.44□□□□□ -0.26
VCP-201ENST00000358901 OR2T5Q6IEZ7 315 aa13.44□□□□□ -0.26
VCP-201ENST00000358901 TMEM135Q86UB9 458 aa13.44□□□□□ -0.26
VCP-201ENST00000358901 FAM124AQ86V42 546 aa13.44□□□□□ -0.26
VCP-201ENST00000358901 OR10G2Q8NGC3 310 aa13.44□□□□□ -0.26
VCP-201ENST00000358901 OR2T29Q8NH02 315 aa13.44□□□□□ -0.26
VCP-201ENST00000358901 DNAJB8Q8NHS0 232 aa13.44□□□□□ -0.26
VCP-201ENST00000358901 CITED4Q96RK1 184 aa13.44□□□□□ -0.26
VCP-201ENST00000358901 IL4I1Q96RQ9 567 aa13.44□□□□□ -0.26
VCP-201ENST00000358901 SNTG1Q9NSN8 517 aa13.44□□□□□ -0.26
VCP-201ENST00000358901 MYH7P12883 1935 aa13.44□□□□□ -0.26
VCP-201ENST00000358901 IRGMA1A4Y4 181 aa13.44□□□□□ -0.26
VCP-201ENST00000358901 PCDH7O60245 1069 aa13.44□□□□□ -0.26
VCP-201ENST00000358901 EPHX1P07099 455 aa13.44□□□□□ -0.26
VCP-201ENST00000358901 NUDT6P53370 316 aa13.44□□□□□ -0.26
VCP-201ENST00000358901 FOXM1Q08050 763 aa13.44□□□□□ -0.26
VCP-201ENST00000358901 MS4A13Q5J8X5 152 aa13.44□□□□□ -0.26
VCP-201ENST00000358901 FRG2Q64ET8 278 aa13.44□□□□□ -0.26
VCP-201ENST00000358901 BICRALQ6AI39 1079 aa13.44□□□□□ -0.26
VCP-201ENST00000358901 TMEM199Q8N511 208 aa13.44□□□□□ -0.26
VCP-201ENST00000358901 TP53INP1Q96A56 240 aa13.44□□□□□ -0.26
VCP-201ENST00000358901 AHCYL2Q96HN2 611 aaKnown RBP13.44□□□□□ -0.26
VCP-201ENST00000358901 FRG2BQ96QU4 278 aa13.44□□□□□ -0.26
VCP-201ENST00000358901 POLR2J3Q9H1A7 115 aaKnown RBP13.44□□□□□ -0.26
VCP-201ENST00000358901 MAGEE1Q9HCI5 957 aa13.44□□□□□ -0.26
VCP-201ENST00000358901 TMLHEQ9NVH6 421 aa13.44□□□□□ -0.26
VCP-201ENST00000358901 FNIP2Q9P278 1114 aa13.44□□□□□ -0.26
VCP-201ENST00000358901 NRXN3Q9Y4C0 1643 aa13.44□□□□□ -0.26
VCP-201ENST00000358901 MYO18AQ92614 2054 aaKnown RBP13.44□□□□□ -0.26
VCP-201ENST00000358901 BTN3A3O00478 584 aa13.44□□□□□ -0.26
VCP-201ENST00000358901 MPZL2O60487 215 aa13.44□□□□□ -0.26
VCP-201ENST00000358901 SLC35E2BP0CK96 405 aa13.44□□□□□ -0.26
VCP-201ENST00000358901 CHADLQ6NUI6 762 aa13.44□□□□□ -0.26
VCP-201ENST00000358901 KRT77Q7Z794 578 aa13.44□□□□□ -0.26
VCP-201ENST00000358901 TP53INP2Q8IXH6 220 aa13.44□□□□□ -0.26
VCP-201ENST00000358901 ZNF433Q8N7K0 673 aaPredicted RBP13.44□□□□□ -0.26
VCP-201ENST00000358901 ZMIZ2Q8NF64 920 aa13.44□□□□□ -0.26
VCP-201ENST00000358901 BRINP2Q9C0B6 783 aa13.44□□□□□ -0.26
VCP-201ENST00000358901 HAPLN2Q9GZV7 340 aa13.44□□□□□ -0.26
VCP-201ENST00000358901 SLC32A1Q9H598 525 aa13.44□□□□□ -0.26
VCP-201ENST00000358901 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.44□□□□□ -0.26
VCP-201ENST00000358901 ZNF282Q9UDV7 671 aaPredicted RBP13.44□□□□□ -0.26
VCP-201ENST00000358901 PMF1-BGLAPU3KQ54 211 aa13.44□□□□□ -0.26
VCP-201ENST00000358901 CPSF4LA6NMK7 179 aaKnown RBP13.43□□□□□ -0.26
VCP-201ENST00000358901 SLC22A1O15245 554 aa13.43□□□□□ -0.26
VCP-201ENST00000358901 F2P00734 622 aa13.43□□□□□ -0.26
VCP-201ENST00000358901 PRNPP04156 253 aa13.43□□□□□ -0.26
VCP-201ENST00000358901 FUT4P22083 530 aa13.43□□□□□ -0.26
VCP-201ENST00000358901 LAPTM4AQ15012 233 aa13.43□□□□□ -0.26
VCP-201ENST00000358901 TGFBIQ15582 683 aa13.43□□□□□ -0.26
VCP-201ENST00000358901 FCGR1BQ92637 280 aa13.43□□□□□ -0.26
VCP-201ENST00000358901 CEP295NLQ96MC4 621 aa13.43□□□□□ -0.26
VCP-201ENST00000358901 MKS1Q9NXB0 559 aa13.43□□□□□ -0.26
VCP-201ENST00000358901 STON1Q9Y6Q2 735 aa13.43□□□□□ -0.26
VCP-201ENST00000358901 A0A0G2JN53 185 aa13.43□□□□□ -0.26
VCP-201ENST00000358901 FZD9O00144 591 aa13.43□□□□□ -0.26
VCP-201ENST00000358901 GTPBP1O00178 669 aaKnown RBP13.43□□□□□ -0.26
VCP-201ENST00000358901 IFNGP01579 166 aa13.43□□□□□ -0.26
VCP-201ENST00000358901 SDC2P34741 201 aa13.43□□□□□ -0.26
VCP-201ENST00000358901 RYKP34925 604 aa13.43□□□□□ -0.26
VCP-201ENST00000358901 ENTPD1P49961 510 aa13.43□□□□□ -0.26
VCP-201ENST00000358901 AGTR2P50052 363 aa13.43□□□□□ -0.26
VCP-201ENST00000358901 MEP1AQ16819 746 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms