RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 POFUT2Q9Y2G5 429 aa5.96□□□□□ -1.45
VPS13B-203ENST00000358544 FARP1Q9Y4F1 1045 aaPredicted RBP5.96□□□□□ -1.45
VPS13B-203ENST00000358544 NWD1Q149M9 1564 aa5.96□□□□□ -1.45
VPS13B-203ENST00000358544 LOC100130705A0A1B0GUX0 176 aa5.96□□□□□ -1.45
VPS13B-203ENST00000358544 SLC15A5A6NIM6 579 aa5.96□□□□□ -1.45
VPS13B-203ENST00000358544 PMM2O15305 246 aa5.96□□□□□ -1.45
VPS13B-203ENST00000358544 ALDOAP04075 364 aaKnown RBP5.96□□□□□ -1.45
VPS13B-203ENST00000358544 CD48P09326 243 aa5.96□□□□□ -1.45
VPS13B-203ENST00000358544 OXA1LQ15070 435 aa5.96□□□□□ -1.45
VPS13B-203ENST00000358544 ELOVL4Q9GZR5 314 aa5.96□□□□□ -1.45
VPS13B-203ENST00000358544 VPS28Q9UK41 221 aa5.96□□□□□ -1.45
VPS13B-203ENST00000358544 LMTK2Q8IWU2 1503 aa5.96□□□□□ -1.45
VPS13B-203ENST00000358544 RAMP2O60895 175 aa5.96□□□□□ -1.45
VPS13B-203ENST00000358544 ZNF432O94892 652 aa5.96□□□□□ -1.45
VPS13B-203ENST00000358544 PRH1P02810 166 aa5.96□□□□□ -1.45
VPS13B-203ENST00000358544 BTN3A2P78410 334 aa5.96□□□□□ -1.45
VPS13B-203ENST00000358544 GAD2Q05329 585 aa5.96□□□□□ -1.45
VPS13B-203ENST00000358544 FAPQ12884 760 aa5.96□□□□□ -1.45
VPS13B-203ENST00000358544 DSC3Q14574 896 aa5.96□□□□□ -1.45
VPS13B-203ENST00000358544 IFI44LQ53G44 452 aa5.96□□□□□ -1.45
VPS13B-203ENST00000358544 LGALS12Q96DT0 336 aa5.96□□□□□ -1.45
VPS13B-203ENST00000358544 TSSK3Q96PN8 268 aa5.96□□□□□ -1.45
VPS13B-203ENST00000358544 EIF2B4Q9UI10 523 aaKnown RBP5.96□□□□□ -1.45
VPS13B-203ENST00000358544 TSPAN3O60637 253 aa5.96□□□□□ -1.46
VPS13B-203ENST00000358544 NPM3O75607 178 aaKnown RBP5.96□□□□□ -1.46
VPS13B-203ENST00000358544 SLC22A5O76082 557 aa5.96□□□□□ -1.46
VPS13B-203ENST00000358544 GOT1P17174 413 aa5.96□□□□□ -1.46
VPS13B-203ENST00000358544 RXRBP28702 533 aa5.96□□□□□ -1.46
VPS13B-203ENST00000358544 ETV3P41162 512 aa5.96□□□□□ -1.46
VPS13B-203ENST00000358544 RBM34P42696 430 aaKnown RBP5.96□□□□□ -1.46
VPS13B-203ENST00000358544 RPS5P46782 204 aaKnown RBP5.96□□□□□ -1.46
VPS13B-203ENST00000358544 SEMA5AQ13591 1074 aa5.96□□□□□ -1.46
VPS13B-203ENST00000358544 TCEAL1Q15170 157 aa5.96□□□□□ -1.46
VPS13B-203ENST00000358544 GLT6D1Q7Z4J2 308 aa5.96□□□□□ -1.46
VPS13B-203ENST00000358544 TSPAN33Q86UF1 283 aa5.96□□□□□ -1.46
VPS13B-203ENST00000358544 EDEM1Q92611 657 aa5.96□□□□□ -1.46
VPS13B-203ENST00000358544 GTF2H4Q92759 462 aa5.96□□□□□ -1.46
VPS13B-203ENST00000358544 SEPT5Q99719 369 aaPredicted RBP5.96□□□□□ -1.46
VPS13B-203ENST00000358544 TTLL2Q9BWV7 592 aa5.96□□□□□ -1.46
VPS13B-203ENST00000358544 TRPV4Q9HBA0 871 aa5.96□□□□□ -1.46
VPS13B-203ENST00000358544 MGAT4CQ9UBM8 478 aa5.96□□□□□ -1.46
VPS13B-203ENST00000358544 FAM86C2PA6NEL3 165 aa5.96□□□□□ -1.46
VPS13B-203ENST00000358544 CBX4O00257 560 aa5.96□□□□□ -1.46
VPS13B-203ENST00000358544 BMP4P12644 408 aa5.96□□□□□ -1.46
VPS13B-203ENST00000358544 LHCGRP22888 699 aa5.96□□□□□ -1.46
VPS13B-203ENST00000358544 CLCN3P51790 818 aa5.96□□□□□ -1.46
VPS13B-203ENST00000358544 XKP51811 444 aa5.96□□□□□ -1.46
VPS13B-203ENST00000358544 CADM3Q8N126 398 aa5.96□□□□□ -1.46
VPS13B-203ENST00000358544 KLHL36Q8N4N3 616 aa5.96□□□□□ -1.46
VPS13B-203ENST00000358544 OR9I1Q8NGQ6 314 aa5.96□□□□□ -1.46
VPS13B-203ENST00000358544 QRFPRQ96P65 431 aa5.96□□□□□ -1.46
VPS13B-203ENST00000358544 ARL6Q9H0F7 186 aa5.96□□□□□ -1.46
VPS13B-203ENST00000358544 MEAF6Q9HAF1 191 aa5.96□□□□□ -1.46
VPS13B-203ENST00000358544 PRDM8Q9NQV8 689 aa5.96□□□□□ -1.46
VPS13B-203ENST00000358544 ARHGAP23Q9P227 1491 aa5.96□□□□□ -1.46
VPS13B-203ENST00000358544 SLC12A8A0AV02 714 aa5.96□□□□□ -1.46
VPS13B-203ENST00000358544 ADGRB1O14514 1584 aa5.96□□□□□ -1.46
VPS13B-203ENST00000358544 GMDSO60547 372 aa5.96□□□□□ -1.46
VPS13B-203ENST00000358544 SERPINA3P01011 423 aa5.96□□□□□ -1.46
VPS13B-203ENST00000358544 HTR2AP28223 471 aa5.96□□□□□ -1.46
VPS13B-203ENST00000358544 RPL19P84098 196 aaKnown RBP5.96□□□□□ -1.46
VPS13B-203ENST00000358544 CD47Q08722 323 aa5.96□□□□□ -1.46
VPS13B-203ENST00000358544 BOP1Q14137 746 aaKnown RBP5.96□□□□□ -1.46
VPS13B-203ENST00000358544 TEAD4Q15561 434 aa5.96□□□□□ -1.46
VPS13B-203ENST00000358544 FAM98CQ17RN3 349 aaKnown RBP5.96□□□□□ -1.46
VPS13B-203ENST00000358544 RIC1Q4ADV7 1423 aa5.96□□□□□ -1.46
VPS13B-203ENST00000358544 CELF3Q5SZQ8 465 aaKnown RBP5.96□□□□□ -1.46
VPS13B-203ENST00000358544 PSD2Q9BQI7 771 aa5.96□□□□□ -1.46
VPS13B-203ENST00000358544 ZNF416Q9BWM5 594 aa5.96□□□□□ -1.46
VPS13B-203ENST00000358544 CKLFQ9UBR5 152 aa5.96□□□□□ -1.46
VPS13B-203ENST00000358544 TRPS1Q9UHF7 1281 aa5.96□□□□□ -1.46
VPS13B-203ENST00000358544 RPL4P36578 427 aaKnown RBP5.96□□□□□ -1.46
VPS13B-203ENST00000358544 GTF2H2Q13888 395 aa5.96□□□□□ -1.46
VPS13B-203ENST00000358544 GTF2H2CQ6P1K8 395 aa5.96□□□□□ -1.46
VPS13B-203ENST00000358544 ULK3Q6PHR2 472 aa5.96□□□□□ -1.46
VPS13B-203ENST00000358544 MIB1Q86YT6 1006 aa5.96□□□□□ -1.46
VPS13B-203ENST00000358544 FAM98AQ8NCA5 519 aaKnown RBP5.96□□□□□ -1.46
VPS13B-203ENST00000358544 TRIM43Q96BQ3 446 aaPredicted RBP5.96□□□□□ -1.46
VPS13B-203ENST00000358544 IFT27Q9BW83 186 aa5.96□□□□□ -1.46
VPS13B-203ENST00000358544 WASH6PQ9NQA3 447 aa5.96□□□□□ -1.46
VPS13B-203ENST00000358544 LSM7Q9UK45 103 aaKnown RBP5.96□□□□□ -1.46
VPS13B-203ENST00000358544 SPATA31A6Q5VVP1 1343 aa5.96□□□□□ -1.46
VPS13B-203ENST00000358544 A0A1B0GVI7 797 aa5.96□□□□□ -1.46
VPS13B-203ENST00000358544 IFNGP01579 166 aa5.96□□□□□ -1.46
VPS13B-203ENST00000358544 RHOAP61586 193 aa5.96□□□□□ -1.46
VPS13B-203ENST00000358544 EIF5AL1Q6IS14 154 aaKnown RBP5.96□□□□□ -1.46
VPS13B-203ENST00000358544 OTOP1Q7RTM1 612 aa5.96□□□□□ -1.46
VPS13B-203ENST00000358544 FAM35AQ86V20 835 aa5.96□□□□□ -1.46
VPS13B-203ENST00000358544 TXNDC5Q8NBS9 432 aaKnown RBP5.96□□□□□ -1.46
VPS13B-203ENST00000358544 SLC29A1Q99808 456 aa5.96□□□□□ -1.46
VPS13B-203ENST00000358544 ATP13A3Q9H7F0 1226 aa5.96□□□□□ -1.46
VPS13B-203ENST00000358544 FOLH1BQ9HBA9 442 aa5.96□□□□□ -1.46
VPS13B-203ENST00000358544 ERVK13-1Q9NX77 482 aa5.96□□□□□ -1.46
VPS13B-203ENST00000358544 GLTPQ9NZD2 209 aa5.96□□□□□ -1.46
VPS13B-203ENST00000358544 CA5BQ9Y2D0 317 aa5.96□□□□□ -1.46
VPS13B-203ENST00000358544 IQCMA0A1B0GVH7 501 aa5.96□□□□□ -1.46
VPS13B-203ENST00000358544 PER2O15055 1255 aa5.96□□□□□ -1.46
VPS13B-203ENST00000358544 DNTTP04053 509 aa5.96□□□□□ -1.46
VPS13B-203ENST00000358544 CTBP2P56545 445 aa5.96□□□□□ -1.46
VPS13B-203ENST00000358544 ZNF484Q5JVG2 852 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms