RNA–Protein interactions for RNA: ENST00000357710.8

PSEN1-202, Transcript of presenilin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSEN1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-202ENST00000357710 C20orf27Q9GZN8 174 aa11.05□□□□□ -0.64
PSEN1-202ENST00000357710 BLOC1S4Q9NUP1 217 aa11.05□□□□□ -0.64
PSEN1-202ENST00000357710 SNX6Q9UNH7 406 aa11.05□□□□□ -0.64
PSEN1-202ENST00000357710 USTQ9Y2C2 406 aa11.05□□□□□ -0.64
PSEN1-202ENST00000357710 IGLV3-22A0A075B6J6 115 aa11.05□□□□□ -0.64
PSEN1-202ENST00000357710 POTEMA6NI47 508 aa11.05□□□□□ -0.64
PSEN1-202ENST00000357710 RRN3P2A6NIE6 340 aa11.05□□□□□ -0.64
PSEN1-202ENST00000357710 KPNA3O00505 521 aaPredicted RBP11.05□□□□□ -0.64
PSEN1-202ENST00000357710 APEHP13798 732 aaKnown RBP11.05□□□□□ -0.64
PSEN1-202ENST00000357710 POU1F1P28069 291 aa11.05□□□□□ -0.64
PSEN1-202ENST00000357710 ATP6V1E1P36543 226 aa11.05□□□□□ -0.64
PSEN1-202ENST00000357710 RFX2P48378 723 aa11.05□□□□□ -0.64
PSEN1-202ENST00000357710 NRLP54845 237 aa11.05□□□□□ -0.64
PSEN1-202ENST00000357710 HNRNPKP61978 463 aaKnown RBP eCLIP11.05□□□□□ -0.64
PSEN1-202ENST00000357710 PSPHP78330 225 aa11.05□□□□□ -0.64
PSEN1-202ENST00000357710 CBLBQ13191 982 aa11.05□□□□□ -0.64
PSEN1-202ENST00000357710 CLN3Q13286 438 aa11.05□□□□□ -0.64
PSEN1-202ENST00000357710 POU4F3Q15319 338 aa11.05□□□□□ -0.64
PSEN1-202ENST00000357710 TIGD6Q17RP2 521 aa11.05□□□□□ -0.64
PSEN1-202ENST00000357710 RNF212Q495C1 297 aa11.05□□□□□ -0.64
PSEN1-202ENST00000357710 SAMD4BQ5PRF9 694 aaKnown RBP11.05□□□□□ -0.64
PSEN1-202ENST00000357710 SAPCD1Q5SSQ6 148 aa11.05□□□□□ -0.64
PSEN1-202ENST00000357710 TTC23Q5W5X9 447 aa11.05□□□□□ -0.64
PSEN1-202ENST00000357710 SWSAP1Q6NVH7 229 aa11.05□□□□□ -0.64
PSEN1-202ENST00000357710 CASC4Q6P4E1 433 aa11.05□□□□□ -0.64
PSEN1-202ENST00000357710 CNSTQ6PJW8 725 aa11.05□□□□□ -0.64
PSEN1-202ENST00000357710 POLNQ7Z5Q5 900 aa11.05□□□□□ -0.64
PSEN1-202ENST00000357710 ZNF557Q8N988 423 aaPredicted RBP11.05□□□□□ -0.64
PSEN1-202ENST00000357710 IPMKQ8NFU5 416 aa11.05□□□□□ -0.64
PSEN1-202ENST00000357710 STRA6Q9BX79 667 aa11.05□□□□□ -0.64
PSEN1-202ENST00000357710 SPATC1LQ9H0A9 340 aa11.05□□□□□ -0.64
PSEN1-202ENST00000357710 DCSTAMPQ9H295 470 aa11.05□□□□□ -0.64
PSEN1-202ENST00000357710 ELAC1Q9H777 363 aaKnown RBP11.05□□□□□ -0.64
PSEN1-202ENST00000357710 MVB12BQ9H7P6 319 aa11.05□□□□□ -0.64
PSEN1-202ENST00000357710 RNF121Q9H920 327 aa11.05□□□□□ -0.64
PSEN1-202ENST00000357710 MRPS30Q9NP92 439 aaKnown RBP11.05□□□□□ -0.64
PSEN1-202ENST00000357710 TRMT13Q9NUP7 481 aaKnown RBP11.05□□□□□ -0.64
PSEN1-202ENST00000357710 WWOXQ9NZC7 414 aa11.05□□□□□ -0.64
PSEN1-202ENST00000357710 OR6C2Q9NZP2 312 aa11.05□□□□□ -0.64
PSEN1-202ENST00000357710 MIOXQ9UGB7 285 aa11.05□□□□□ -0.64
PSEN1-202ENST00000357710 PACSIN3Q9UKS6 424 aa11.05□□□□□ -0.64
PSEN1-202ENST00000357710 DRG1Q9Y295 367 aaKnown RBP11.05□□□□□ -0.64
PSEN1-202ENST00000357710 VPS9D1Q9Y2B5 631 aa11.05□□□□□ -0.64
PSEN1-202ENST00000357710 A8MXK9 166 aa11.05□□□□□ -0.64
PSEN1-202ENST00000357710 FPGTO14772 594 aa11.05□□□□□ -0.64
PSEN1-202ENST00000357710 PER2O15055 1255 aa11.05□□□□□ -0.64
PSEN1-202ENST00000357710 ITGBL1O95965 494 aaPredicted RBP11.05□□□□□ -0.64
PSEN1-202ENST00000357710 OGNP20774 298 aaKnown RBP11.05□□□□□ -0.64
PSEN1-202ENST00000357710 BCAT1P54687 386 aa11.05□□□□□ -0.64
PSEN1-202ENST00000357710 BAATQ14032 418 aaPredicted RBP11.05□□□□□ -0.64
PSEN1-202ENST00000357710 GPAT2Q6NUI2 795 aa11.05□□□□□ -0.64
PSEN1-202ENST00000357710 SYVN1Q86TM6 617 aa11.05□□□□□ -0.64
PSEN1-202ENST00000357710 CCDC190Q86UF4 302 aa11.05□□□□□ -0.64
PSEN1-202ENST00000357710 DHFR2Q86XF0 187 aa11.05□□□□□ -0.64
PSEN1-202ENST00000357710 DDIASQ8IXT1 998 aa11.05□□□□□ -0.64
PSEN1-202ENST00000357710 SLC22A15Q8IZD6 547 aa11.05□□□□□ -0.64
PSEN1-202ENST00000357710 UNC5BQ8IZJ1 945 aa11.05□□□□□ -0.64
PSEN1-202ENST00000357710 NAGSQ8N159 534 aa11.05□□□□□ -0.64
PSEN1-202ENST00000357710 ZNF564Q8TBZ8 553 aaPredicted RBP11.05□□□□□ -0.64
PSEN1-202ENST00000357710 COL26A1Q96A83 441 aa11.05□□□□□ -0.64
PSEN1-202ENST00000357710 SORCS2Q96PQ0 1159 aa11.05□□□□□ -0.64
PSEN1-202ENST00000357710 GAD1Q99259 594 aa11.05□□□□□ -0.64
PSEN1-202ENST00000357710 AGPAT1Q99943 283 aa11.05□□□□□ -0.64
PSEN1-202ENST00000357710 TBCDQ9BTW9 1192 aa11.05□□□□□ -0.64
PSEN1-202ENST00000357710 SDHAF2Q9NX18 166 aa11.05□□□□□ -0.64
PSEN1-202ENST00000357710 MGAT4BQ9UQ53 548 aa11.05□□□□□ -0.64
PSEN1-202ENST00000357710 U3KQV3 271 aa11.05□□□□□ -0.64
PSEN1-202ENST00000357710 CCL15-CCL14A0A0B4J2E2 113 aa11.04□□□□□ -0.64
PSEN1-202ENST00000357710 E9PAM4 449 aa11.04□□□□□ -0.64
PSEN1-202ENST00000357710 KCNK1O00180 336 aa11.04□□□□□ -0.64
PSEN1-202ENST00000357710 MSH4O15457 936 aa11.04□□□□□ -0.64
PSEN1-202ENST00000357710 SSX4O60224 188 aa11.04□□□□□ -0.64
PSEN1-202ENST00000357710 LYPLA1O75608 230 aaPredicted RBP11.04□□□□□ -0.64
PSEN1-202ENST00000357710 ALPLP05186 524 aa11.04□□□□□ -0.64
PSEN1-202ENST00000357710 MAGP20916 626 aa11.04□□□□□ -0.64
PSEN1-202ENST00000357710 RPS3P23396 243 aaKnown RBP eCLIP11.04□□□□□ -0.64
PSEN1-202ENST00000357710 ELK4P28324 431 aa11.04□□□□□ -0.64
PSEN1-202ENST00000357710 NSFP46459 744 aaKnown RBP11.04□□□□□ -0.64
PSEN1-202ENST00000357710 SULT1E1P49888 294 aa11.04□□□□□ -0.64
PSEN1-202ENST00000357710 PSME3P61289 254 aa11.04□□□□□ -0.64
PSEN1-202ENST00000357710 NOMO3P69849 1222 aa11.04□□□□□ -0.64
PSEN1-202ENST00000357710 GTF2BQ00403 316 aa11.04□□□□□ -0.64
PSEN1-202ENST00000357710 DMP1Q13316 513 aaPredicted RBP11.04□□□□□ -0.64
PSEN1-202ENST00000357710 SMAD4Q13485 552 aaKnown RBP11.04□□□□□ -0.64
PSEN1-202ENST00000357710 ALCAMQ13740 583 aa11.04□□□□□ -0.64
PSEN1-202ENST00000357710 NOMO1Q15155 1222 aa11.04□□□□□ -0.64
PSEN1-202ENST00000357710 CCL15Q16663 113 aa11.04□□□□□ -0.64
PSEN1-202ENST00000357710 C2CD6Q53TS8 623 aa11.04□□□□□ -0.64
PSEN1-202ENST00000357710 TBCELQ5QJ74 424 aa11.04□□□□□ -0.64
PSEN1-202ENST00000357710 CDHR3Q6ZTQ4 885 aa11.04□□□□□ -0.64
PSEN1-202ENST00000357710 LNX2Q8N448 690 aa11.04□□□□□ -0.64
PSEN1-202ENST00000357710 SLC5A5Q92911 643 aa11.04□□□□□ -0.64
PSEN1-202ENST00000357710 NTAN1Q96AB6 310 aa11.04□□□□□ -0.64
PSEN1-202ENST00000357710 MARK4Q96L34 752 aa11.04□□□□□ -0.64
PSEN1-202ENST00000357710 REG4Q9BYZ8 158 aa11.04□□□□□ -0.64
PSEN1-202ENST00000357710 GSX2Q9BZM3 304 aa11.04□□□□□ -0.64
PSEN1-202ENST00000357710 PPIL3Q9H2H8 161 aaKnown RBP11.04□□□□□ -0.64
PSEN1-202ENST00000357710 PCDH9Q9HC56 1237 aa11.04□□□□□ -0.64
PSEN1-202ENST00000357710 CHMP1AQ9HD42 196 aaPredicted RBP11.04□□□□□ -0.64
PSEN1-202ENST00000357710 NIT2Q9NQR4 276 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms