RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 ARL15Q9NXU5 204 aa24.66■■□□□ 1.54
SSBP3-202ENST00000357475 ASXL3Q9C0F0 2248 aa24.65■■□□□ 1.54
SSBP3-202ENST00000357475 RP1P56715 2156 aa24.65■■□□□ 1.54
SSBP3-202ENST00000357475 TMEM120BA0PK00 339 aa24.65■■□□□ 1.54
SSBP3-202ENST00000357475 PRPF4O43172 522 aaKnown RBP eCLIP24.65■■□□□ 1.543e-6■■■□□ 17
SSBP3-202ENST00000357475 RPN2P04844 631 aa24.65■■□□□ 1.54
SSBP3-202ENST00000357475 GRK6P43250 576 aa24.65■■□□□ 1.54
SSBP3-202ENST00000357475 MAPK9P45984 424 aa24.65■■□□□ 1.54
SSBP3-202ENST00000357475 STPG1Q5TH74 334 aa24.65■■□□□ 1.54
SSBP3-202ENST00000357475 GUSBP11Q6P575 273 aa24.65■■□□□ 1.54
SSBP3-202ENST00000357475 PPFIBP2Q8ND30 876 aa24.65■■□□□ 1.54
SSBP3-202ENST00000357475 OR9A1PQ8NGU1 263 aa24.65■■□□□ 1.54
SSBP3-202ENST00000357475 MCOLN3Q8TDD5 553 aa24.65■■□□□ 1.54
SSBP3-202ENST00000357475 RAD51AP1Q96B01 352 aa24.65■■□□□ 1.54
SSBP3-202ENST00000357475 SELENOSQ9BQE4 189 aa24.65■■□□□ 1.54
SSBP3-202ENST00000357475 RDH14Q9HBH5 336 aa24.65■■□□□ 1.54
SSBP3-202ENST00000357475 MLXIPLQ9NP71 852 aa24.65■■□□□ 1.54
SSBP3-202ENST00000357475 LRIT1Q9P2V4 623 aa24.65■■□□□ 1.54
SSBP3-202ENST00000357475 PADI4Q9UM07 663 aa24.65■■□□□ 1.54
SSBP3-202ENST00000357475 COL5A1P20908 1838 aaPredicted RBP24.64■■□□□ 1.54
SSBP3-202ENST00000357475 FLRT2O43155 660 aa24.64■■□□□ 1.53
SSBP3-202ENST00000357475 ENO2P09104 434 aaPredicted RBP24.64■■□□□ 1.53
SSBP3-202ENST00000357475 SLC14A1Q13336 389 aa24.64■■□□□ 1.53
SSBP3-202ENST00000357475 FASTKQ14296 549 aaKnown RBP24.64■■□□□ 1.53
SSBP3-202ENST00000357475 NR0B2Q15466 257 aa24.64■■□□□ 1.53
SSBP3-202ENST00000357475 TMEM26Q6ZUK4 368 aa24.64■■□□□ 1.53
SSBP3-202ENST00000357475 ANKRD42Q8N9B4 389 aa24.64■■□□□ 1.53
SSBP3-202ENST00000357475 RHBDD1Q8TEB9 315 aa24.64■■□□□ 1.53
SSBP3-202ENST00000357475 ESAMQ96AP7 390 aa24.64■■□□□ 1.53
SSBP3-202ENST00000357475 IQCGQ9H095 443 aaKnown RBP24.64■■□□□ 1.53
SSBP3-202ENST00000357475 CD274Q9NZQ7 290 aa24.64■■□□□ 1.53
SSBP3-202ENST00000357475 LOC105378220A0A1B0GUY1 285 aaPredicted RBP24.63■■□□□ 1.53
SSBP3-202ENST00000357475 G3V2L1 256 aa24.63■■□□□ 1.53
SSBP3-202ENST00000357475 HIST1H2AGP0C0S8 130 aaPredicted RBP24.63■■□□□ 1.53
SSBP3-202ENST00000357475 HIST1H2ADP20671 130 aa24.63■■□□□ 1.53
SSBP3-202ENST00000357475 NDUFS1P28331 727 aa24.63■■□□□ 1.53
SSBP3-202ENST00000357475 IMPA1P29218 277 aa24.63■■□□□ 1.53
SSBP3-202ENST00000357475 ETV4P43268 484 aa24.63■■□□□ 1.53
SSBP3-202ENST00000357475 KPNA2P52292 529 aaKnown RBP24.63■■□□□ 1.53
SSBP3-202ENST00000357475 NAXDQ8IW45 347 aa24.63■■□□□ 1.53
SSBP3-202ENST00000357475 LINC01555Q8NAE3 123 aa24.63■■□□□ 1.53
SSBP3-202ENST00000357475 OR4E2Q8NGC2 313 aa24.63■■□□□ 1.53
SSBP3-202ENST00000357475 HIST1H2AHQ96KK5 128 aa24.63■■□□□ 1.53
SSBP3-202ENST00000357475 HIST1H2AJQ99878 128 aa24.63■■□□□ 1.53
SSBP3-202ENST00000357475 H2AFJQ9BTM1 129 aa24.63■■□□□ 1.53
SSBP3-202ENST00000357475 STOX2Q9P2F5 926 aaPredicted RBP24.63■■□□□ 1.53
SSBP3-202ENST00000357475 POLG2Q9UHN1 485 aa24.63■■□□□ 1.53
SSBP3-202ENST00000357475 ASB1Q9Y576 335 aa24.63■■□□□ 1.53
SSBP3-202ENST00000357475 TAPBPO15533 448 aa24.62■■□□□ 1.53
SSBP3-202ENST00000357475 AGTR2P50052 363 aa24.62■■□□□ 1.53
SSBP3-202ENST00000357475 PLCL1Q15111 1095 aa24.62■■□□□ 1.53
SSBP3-202ENST00000357475 CCDC153Q494R4 210 aa24.62■■□□□ 1.53
SSBP3-202ENST00000357475 PERM1Q5SV97 790 aa24.62■■□□□ 1.53
SSBP3-202ENST00000357475 TTC23LQ6PF05 361 aa24.62■■□□□ 1.53
SSBP3-202ENST00000357475 TAX1BP1Q86VP1 789 aa24.62■■□□□ 1.53
SSBP3-202ENST00000357475 CCDC63Q8NA47 563 aa24.62■■□□□ 1.53
SSBP3-202ENST00000357475 PDPRQ8NCN5 879 aa24.62■■□□□ 1.53
SSBP3-202ENST00000357475 MDM1Q8TC05 714 aa24.62■■□□□ 1.53
SSBP3-202ENST00000357475 MAGEC3Q8TD91 643 aa24.62■■□□□ 1.53
SSBP3-202ENST00000357475 ZNF480Q8WV37 535 aa24.62■■□□□ 1.53
SSBP3-202ENST00000357475 CCDC74AQ96AQ1 378 aa24.62■■□□□ 1.53
SSBP3-202ENST00000357475 RHBDF1Q96CC6 855 aa24.62■■□□□ 1.53
SSBP3-202ENST00000357475 EGFL8Q99944 293 aa24.62■■□□□ 1.53
SSBP3-202ENST00000357475 TRIM54Q9BYV2 358 aa24.62■■□□□ 1.53
SSBP3-202ENST00000357475 ATG10Q9H0Y0 220 aa24.62■■□□□ 1.53
SSBP3-202ENST00000357475 MED4Q9NPJ6 270 aa24.62■■□□□ 1.53
SSBP3-202ENST00000357475 ACSS2Q9NR19 701 aa24.62■■□□□ 1.53
SSBP3-202ENST00000357475 NUDT4Q9NZJ9 180 aa24.62■■□□□ 1.53
SSBP3-202ENST00000357475 GVINP1Q7Z2Y8 2422 aa24.62■■□□□ 1.53
SSBP3-202ENST00000357475 FAM186AA6NE01 2351 aa24.62■■□□□ 1.53
SSBP3-202ENST00000357475 CPED1A4D0V7 1026 aa24.61■■□□□ 1.53
SSBP3-202ENST00000357475 LRRC14BA6NHZ5 514 aa24.61■■□□□ 1.53
SSBP3-202ENST00000357475 RHPN2P1A8MT19 583 aa24.61■■□□□ 1.53
SSBP3-202ENST00000357475 DLX3O60479 287 aa24.61■■□□□ 1.53
SSBP3-202ENST00000357475 GFRA3O60609 400 aa24.61■■□□□ 1.53
SSBP3-202ENST00000357475 GLB1P16278 677 aa24.61■■□□□ 1.53
SSBP3-202ENST00000357475 PKLRP30613 574 aa24.61■■□□□ 1.53
SSBP3-202ENST00000357475 AP1S2P56377 157 aa24.61■■□□□ 1.53
SSBP3-202ENST00000357475 BIRC2Q13490 618 aa24.61■■□□□ 1.53
SSBP3-202ENST00000357475 PFKFB4Q16877 469 aa24.61■■□□□ 1.53
SSBP3-202ENST00000357475 ZNF438Q7Z4V0 828 aa24.61■■□□□ 1.53
SSBP3-202ENST00000357475 KIAA2013Q8IYS2 634 aa24.61■■□□□ 1.53
SSBP3-202ENST00000357475 MGARPQ8TDB4 240 aa24.61■■□□□ 1.53
SSBP3-202ENST00000357475 MOCOSQ96EN8 888 aa24.61■■□□□ 1.53
SSBP3-202ENST00000357475 CNDP2Q96KP4 475 aaKnown RBP24.61■■□□□ 1.53
SSBP3-202ENST00000357475 CCDC138Q96M89 665 aa24.61■■□□□ 1.53
SSBP3-202ENST00000357475 TMEM79Q9BSE2 394 aa24.61■■□□□ 1.53
SSBP3-202ENST00000357475 NUDT21O43809 227 aaKnown RBP24.61■■□□□ 1.53
SSBP3-202ENST00000357475 KLK8O60259 260 aa24.61■■□□□ 1.53
SSBP3-202ENST00000357475 CBFA2T3O75081 653 aa24.61■■□□□ 1.53
SSBP3-202ENST00000357475 ERGP11308 486 aa24.61■■□□□ 1.53
SSBP3-202ENST00000357475 OR1D5P58170 312 aa24.61■■□□□ 1.53
SSBP3-202ENST00000357475 CDKL1Q00532 357 aa24.61■■□□□ 1.53
SSBP3-202ENST00000357475 LRRC56Q8IYG6 542 aaPredicted RBP24.61■■□□□ 1.53
SSBP3-202ENST00000357475 Q8N9G6 341 aaPredicted RBP24.61■■□□□ 1.53
SSBP3-202ENST00000357475 LCN9Q8WX39 176 aa24.61■■□□□ 1.53
SSBP3-202ENST00000357475 FBXL8Q96CD0 374 aa24.61■■□□□ 1.53
SSBP3-202ENST00000357475 PHF21BQ96EK2 531 aa24.61■■□□□ 1.53
SSBP3-202ENST00000357475 SLC38A3Q99624 504 aa24.61■■□□□ 1.53
SSBP3-202ENST00000357475 MECRQ9BV79 373 aa24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms