RNA–Protein interactions for RNA: ENST00000357376.7

RTN4-203, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,110 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-203ENST00000357376 TSPEARQ8WU66 669 aa6.69□□□□□ -1.34
RTN4-203ENST00000357376 BRD9Q9H8M2 597 aa6.69□□□□□ -1.34
RTN4-203ENST00000357376 FAIMQ9NVQ4 179 aa6.69□□□□□ -1.34
RTN4-203ENST00000357376 ERVK-18Q9QC07 812 aa6.69□□□□□ -1.34
RTN4-203ENST00000357376 ZNF451Q9Y4E5 1061 aa6.69□□□□□ -1.34
RTN4-203ENST00000357376 PNMA8CA0A1B0GUJ8 204 aa6.69□□□□□ -1.34
RTN4-203ENST00000357376 MROH6A6NGR9 719 aa6.69□□□□□ -1.34
RTN4-203ENST00000357376 SYN3O14994 580 aa6.69□□□□□ -1.34
RTN4-203ENST00000357376 AIREO43918 545 aa6.69□□□□□ -1.34
RTN4-203ENST00000357376 ALDH1A1P00352 501 aa6.69□□□□□ -1.34
RTN4-203ENST00000357376 PAX3P23760 479 aa6.69□□□□□ -1.34
RTN4-203ENST00000357376 SPAM1P38567 509 aa6.69□□□□□ -1.34
RTN4-203ENST00000357376 TMBIM6P55061 237 aa6.69□□□□□ -1.34
RTN4-203ENST00000357376 AAK1Q2M2I8 961 aa6.69□□□□□ -1.34
RTN4-203ENST00000357376 COLEC12Q5KU26 742 aa6.69□□□□□ -1.34
RTN4-203ENST00000357376 TICAM1Q8IUC6 712 aa6.69□□□□□ -1.34
RTN4-203ENST00000357376 ARL14EPQ8N8R7 260 aaPredicted RBP6.69□□□□□ -1.34
RTN4-203ENST00000357376 ZBTB8BQ8NAP8 495 aaPredicted RBP6.69□□□□□ -1.34
RTN4-203ENST00000357376 HJURPQ8NCD3 748 aaPredicted RBP6.69□□□□□ -1.34
RTN4-203ENST00000357376 GLB1L3Q8NCI6 653 aaPredicted RBP6.69□□□□□ -1.34
RTN4-203ENST00000357376 FBXO22Q8NEZ5 403 aa6.69□□□□□ -1.34
RTN4-203ENST00000357376 CD200R1Q8TD46 325 aa6.69□□□□□ -1.34
RTN4-203ENST00000357376 MS4A4AQ96JQ5 239 aa6.69□□□□□ -1.34
RTN4-203ENST00000357376 MIR1-1HGQ9H1L0 117 aa6.69□□□□□ -1.34
RTN4-203ENST00000357376 TPK1Q9H3S4 243 aa6.69□□□□□ -1.34
RTN4-203ENST00000357376 CACYBPQ9HB71 228 aaKnown RBP6.69□□□□□ -1.34
RTN4-203ENST00000357376 MAGEE1Q9HCI5 957 aa6.69□□□□□ -1.34
RTN4-203ENST00000357376 KCTD5Q9NXV2 234 aa6.69□□□□□ -1.34
RTN4-203ENST00000357376 TMCC3Q9ULS5 477 aa6.69□□□□□ -1.34
RTN4-203ENST00000357376 PCDHA9Q9Y5H5 950 aa6.69□□□□□ -1.34
RTN4-203ENST00000357376 LOC285095A0A1B0GVY8 99 aa6.68□□□□□ -1.34
RTN4-203ENST00000357376 ANKRD33BA6NCL7 494 aa6.68□□□□□ -1.34
RTN4-203ENST00000357376 MAGEB17A8MXT2 336 aa6.68□□□□□ -1.34
RTN4-203ENST00000357376 EFCAB9A8MZ26 197 aa6.68□□□□□ -1.34
RTN4-203ENST00000357376 K7ERQ8 282 aa6.68□□□□□ -1.34
RTN4-203ENST00000357376 CLIC1O00299 241 aa6.68□□□□□ -1.34
RTN4-203ENST00000357376 SNPHO15079 494 aa6.68□□□□□ -1.34
RTN4-203ENST00000357376 CYP7B1O75881 506 aa6.68□□□□□ -1.34
RTN4-203ENST00000357376 URODP06132 367 aa6.68□□□□□ -1.34
RTN4-203ENST00000357376 CD247P20963 164 aa6.68□□□□□ -1.34
RTN4-203ENST00000357376 OPRL1P41146 370 aa6.68□□□□□ -1.34
RTN4-203ENST00000357376 NAE1Q13564 534 aa6.68□□□□□ -1.34
RTN4-203ENST00000357376 RRM2BQ7LG56 351 aa6.68□□□□□ -1.34
RTN4-203ENST00000357376 CYP2U1Q7Z449 544 aa6.68□□□□□ -1.34
RTN4-203ENST00000357376 TRMT11Q7Z4G4 463 aaKnown RBP6.68□□□□□ -1.34
RTN4-203ENST00000357376 SLC22A15Q8IZD6 547 aa6.68□□□□□ -1.34
RTN4-203ENST00000357376 HDAC2Q92769 488 aaKnown RBP6.68□□□□□ -1.34
RTN4-203ENST00000357376 PROX1Q92786 737 aa6.68□□□□□ -1.34
RTN4-203ENST00000357376 UPF1Q92900 1129 aaKnown RBP eCLIP6.68□□□□□ -1.348e-30■■□□□ 13.3
RTN4-203ENST00000357376 ZFYVE19Q96K21 471 aa6.68□□□□□ -1.34
RTN4-203ENST00000357376 KCNC2Q96PR1 638 aa6.68□□□□□ -1.34
RTN4-203ENST00000357376 VPS35Q96QK1 796 aa6.68□□□□□ -1.34
RTN4-203ENST00000357376 PTPN18Q99952 460 aa6.68□□□□□ -1.34
RTN4-203ENST00000357376 COPS4Q9BT78 406 aa6.68□□□□□ -1.34
RTN4-203ENST00000357376 KATNBL1Q9H079 304 aa6.68□□□□□ -1.34
RTN4-203ENST00000357376 AASDHPPTQ9NRN7 309 aa6.68□□□□□ -1.34
RTN4-203ENST00000357376 SLC22A14Q9Y267 594 aa6.68□□□□□ -1.34
RTN4-203ENST00000357376 ILVBLA1L0T0 632 aa6.68□□□□□ -1.34
RTN4-203ENST00000357376 FUOMA2VDF0 154 aa6.68□□□□□ -1.34
RTN4-203ENST00000357376 PDZK1P1A8MUH7 402 aa6.68□□□□□ -1.34
RTN4-203ENST00000357376 M0QZQ0 153 aa6.68□□□□□ -1.34
RTN4-203ENST00000357376 FXYD1O00168 92 aa6.68□□□□□ -1.34
RTN4-203ENST00000357376 MANBAO00462 879 aa6.68□□□□□ -1.34
RTN4-203ENST00000357376 SEPT4O43236 478 aa6.68□□□□□ -1.34
RTN4-203ENST00000357376 LRG1P02750 347 aa6.68□□□□□ -1.34
RTN4-203ENST00000357376 ENGP17813 658 aa6.68□□□□□ -1.34
RTN4-203ENST00000357376 GGT1P19440 569 aa6.68□□□□□ -1.34
RTN4-203ENST00000357376 CTSKP43235 329 aa6.68□□□□□ -1.34
RTN4-203ENST00000357376 KRT33BQ14525 404 aa6.68□□□□□ -1.34
RTN4-203ENST00000357376 PHKG1Q16816 387 aa6.68□□□□□ -1.34
RTN4-203ENST00000357376 ADGRF1Q5T601 910 aa6.68□□□□□ -1.34
RTN4-203ENST00000357376 OR2T5Q6IEZ7 315 aa6.68□□□□□ -1.34
RTN4-203ENST00000357376 CLIP4Q8N3C7 705 aa6.68□□□□□ -1.34
RTN4-203ENST00000357376 C2orf73Q8N5S3 287 aaPredicted RBP6.68□□□□□ -1.34
RTN4-203ENST00000357376 FAM86B1Q8N7N1 296 aa6.68□□□□□ -1.34
RTN4-203ENST00000357376 OR2T29Q8NH02 315 aa6.68□□□□□ -1.34
RTN4-203ENST00000357376 GTPBP3Q969Y2 492 aaKnown RBP6.68□□□□□ -1.34
RTN4-203ENST00000357376 DPH2Q9BQC3 489 aaPredicted RBP6.68□□□□□ -1.34
RTN4-203ENST00000357376 ACAT2Q9BWD1 397 aa6.68□□□□□ -1.34
RTN4-203ENST00000357376 KAT8Q9H7Z6 458 aaKnown RBP6.68□□□□□ -1.34
RTN4-203ENST00000357376 CCNB1IP1Q9NPC3 277 aa6.68□□□□□ -1.34
RTN4-203ENST00000357376 ITM2CQ9NQX7 267 aa6.68□□□□□ -1.34
RTN4-203ENST00000357376 DNAJC11Q9NVH1 559 aa6.68□□□□□ -1.34
RTN4-203ENST00000357376 SLC25A13Q9UJS0 675 aa6.68□□□□□ -1.34
RTN4-203ENST00000357376 RAB23Q9ULC3 237 aa6.68□□□□□ -1.34
RTN4-203ENST00000357376 DHRS7Q9Y394 339 aa6.68□□□□□ -1.34
RTN4-203ENST00000357376 PCDHGA11Q9Y5H2 935 aa6.68□□□□□ -1.34
RTN4-203ENST00000357376 HAS3O00219 553 aa6.68□□□□□ -1.34
RTN4-203ENST00000357376 SLC1A7O00341 560 aa6.68□□□□□ -1.34
RTN4-203ENST00000357376 TFECO14948 347 aaPredicted RBP6.68□□□□□ -1.34
RTN4-203ENST00000357376 KDELR3O43731 214 aa6.68□□□□□ -1.34
RTN4-203ENST00000357376 ZNF623O75123 536 aa6.68□□□□□ -1.34
RTN4-203ENST00000357376 ERN1O75460 977 aaKnown RBP6.68□□□□□ -1.34
RTN4-203ENST00000357376 CHRM5P08912 532 aaPredicted RBP6.68□□□□□ -1.34
RTN4-203ENST00000357376 C7P10643 843 aa6.68□□□□□ -1.34
RTN4-203ENST00000357376 BCKDHAP12694 445 aa6.68□□□□□ -1.34
RTN4-203ENST00000357376 EPORP19235 508 aa6.68□□□□□ -1.34
RTN4-203ENST00000357376 AZGP1P25311 298 aaKnown RBP6.68□□□□□ -1.34
RTN4-203ENST00000357376 RRM2P31350 389 aa6.68□□□□□ -1.34
RTN4-203ENST00000357376 HPCAL1P37235 193 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms