RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 SLC5A2P31639 672 aa8.05□□□□□ -1.12
CD44-205ENST00000352818 CD70P32970 193 aa8.05□□□□□ -1.12
CD44-205ENST00000352818 CPOXP36551 454 aa8.05□□□□□ -1.12
CD44-205ENST00000352818 ABL2P42684 1182 aa8.05□□□□□ -1.12
CD44-205ENST00000352818 SNRPD1P62314 119 aaKnown RBP8.05□□□□□ -1.12
CD44-205ENST00000352818 HERVK_113P63132 956 aa8.05□□□□□ -1.12
CD44-205ENST00000352818 IRX1P78414 480 aaPredicted RBP8.05□□□□□ -1.12
CD44-205ENST00000352818 BTKQ06187 659 aa8.05□□□□□ -1.12
CD44-205ENST00000352818 RAD51Q06609 339 aa8.05□□□□□ -1.12
CD44-205ENST00000352818 STARD3Q14849 445 aa8.05□□□□□ -1.12
CD44-205ENST00000352818 NAA25Q14CX7 972 aa8.05□□□□□ -1.12
CD44-205ENST00000352818 CDKN3Q16667 212 aa8.05□□□□□ -1.12
CD44-205ENST00000352818 CTSL3PQ5NE16 218 aa8.05□□□□□ -1.12
CD44-205ENST00000352818 VWA5B1Q5TIE3 1220 aa8.05□□□□□ -1.12
CD44-205ENST00000352818 ZDHHC20Q5W0Z9 365 aa8.05□□□□□ -1.12
CD44-205ENST00000352818 UGT3A1Q6NUS8 523 aa8.05□□□□□ -1.12
CD44-205ENST00000352818 C22orf39Q6P5X5 142 aa8.05□□□□□ -1.12
CD44-205ENST00000352818 KIAA0907Q7Z7F0 614 aaPredicted RBP8.05□□□□□ -1.12
CD44-205ENST00000352818 CUZD1Q86UP6 607 aa8.05□□□□□ -1.12
CD44-205ENST00000352818 ATCAYQ86WG3 371 aa8.05□□□□□ -1.12
CD44-205ENST00000352818 CCNYL1Q8N7R7 359 aa8.05□□□□□ -1.12
CD44-205ENST00000352818 ENDOVQ8N8Q3 282 aaKnown RBP8.05□□□□□ -1.12
CD44-205ENST00000352818 RBM15BQ8NDT2 890 aaKnown RBP8.05□□□□□ -1.12
CD44-205ENST00000352818 ACTRT2Q8TDY3 377 aa8.05□□□□□ -1.12
CD44-205ENST00000352818 AGAP11Q8TF27 550 aa8.05□□□□□ -1.12
CD44-205ENST00000352818 ECHDC3Q96DC8 303 aa8.05□□□□□ -1.12
CD44-205ENST00000352818 PDLIM5Q96HC4 596 aaKnown RBP8.05□□□□□ -1.12
CD44-205ENST00000352818 ERVK-6Q9BXR3 956 aa8.05□□□□□ -1.12
CD44-205ENST00000352818 P2RY12Q9H244 342 aa8.05□□□□□ -1.12
CD44-205ENST00000352818 GSTO2Q9H4Y5 243 aa8.05□□□□□ -1.12
CD44-205ENST00000352818 ALG9Q9H6U8 611 aa8.05□□□□□ -1.12
CD44-205ENST00000352818 RNPEPL1Q9HAU8 725 aa8.05□□□□□ -1.12
CD44-205ENST00000352818 WDR70Q9NW82 654 aa8.05□□□□□ -1.12
CD44-205ENST00000352818 CUEDC1Q9NWM3 386 aaPredicted RBP8.05□□□□□ -1.12
CD44-205ENST00000352818 UCKL1Q9NWZ5 548 aa8.05□□□□□ -1.12
CD44-205ENST00000352818 DKK3Q9UBP4 350 aa8.05□□□□□ -1.12
CD44-205ENST00000352818 ZDHHC2Q9UIJ5 367 aa8.05□□□□□ -1.12
CD44-205ENST00000352818 SLC25A13Q9UJS0 675 aa8.05□□□□□ -1.12
CD44-205ENST00000352818 FBXO10Q9UK96 956 aa8.05□□□□□ -1.12
CD44-205ENST00000352818 APPL1Q9UKG1 709 aa8.05□□□□□ -1.12
CD44-205ENST00000352818 ACSL6Q9UKU0 697 aa8.05□□□□□ -1.12
CD44-205ENST00000352818 SLC30A1Q9Y6M5 507 aa8.05□□□□□ -1.12
CD44-205ENST00000352818 UBA6A0AVT1 1052 aaPredicted RBP8.04□□□□□ -1.12
CD44-205ENST00000352818 NEMP2A6NFY4 417 aa8.04□□□□□ -1.12
CD44-205ENST00000352818 AGAP14A8MT82 685 aa8.04□□□□□ -1.12
CD44-205ENST00000352818 B2RBV5 119 aa8.04□□□□□ -1.12
CD44-205ENST00000352818 NEDD8-MDP1E9PL57 170 aa8.04□□□□□ -1.12
CD44-205ENST00000352818 H3BMM5 538 aa8.04□□□□□ -1.12
CD44-205ENST00000352818 SDHDO14521 159 aa8.04□□□□□ -1.12
CD44-205ENST00000352818 GAPDHSO14556 408 aaPredicted RBP8.04□□□□□ -1.12
CD44-205ENST00000352818 PRMT5O14744 637 aaPredicted RBP8.04□□□□□ -1.12
CD44-205ENST00000352818 SMAD6O43541 496 aaKnown RBP8.04□□□□□ -1.12
CD44-205ENST00000352818 PEX11AO75192 247 aa8.04□□□□□ -1.12
CD44-205ENST00000352818 TSPAN12O95859 305 aa8.04□□□□□ -1.12
CD44-205ENST00000352818 SLC4A1P02730 911 aa8.04□□□□□ -1.12
CD44-205ENST00000352818 FGF4P08620 206 aa8.04□□□□□ -1.12
CD44-205ENST00000352818 RPS17P08708 135 aaKnown RBP8.04□□□□□ -1.12
CD44-205ENST00000352818 ACADMP11310 421 aa8.04□□□□□ -1.12
CD44-205ENST00000352818 PABPC1P11940 636 aaKnown RBP8.04□□□□□ -1.12
CD44-205ENST00000352818 MTHFD2P13995 350 aa8.04□□□□□ -1.12
CD44-205ENST00000352818 TYRP14679 529 aa8.04□□□□□ -1.12
CD44-205ENST00000352818 ITGALP20701 1170 aa8.04□□□□□ -1.12
CD44-205ENST00000352818 HLA-FP30511 346 aa8.04□□□□□ -1.12
CD44-205ENST00000352818 PGM1P36871 562 aa8.04□□□□□ -1.12
CD44-205ENST00000352818 ARRB1P49407 418 aaPredicted RBP8.04□□□□□ -1.12
CD44-205ENST00000352818 ATP4BP51164 291 aa8.04□□□□□ -1.12
CD44-205ENST00000352818 CDC16Q13042 620 aa8.04□□□□□ -1.12
CD44-205ENST00000352818 KLF10Q13118 480 aa8.04□□□□□ -1.12
CD44-205ENST00000352818 TESK1Q15569 626 aa8.04□□□□□ -1.12
CD44-205ENST00000352818 OR4D1Q15615 310 aa8.04□□□□□ -1.12
CD44-205ENST00000352818 GEN1Q17RS7 908 aa8.04□□□□□ -1.12
CD44-205ENST00000352818 TRMT5Q32P41 509 aaKnown RBP8.04□□□□□ -1.12
CD44-205ENST00000352818 LSM12Q3MHD2 195 aaKnown RBP8.04□□□□□ -1.12
CD44-205ENST00000352818 GPR33Q49SQ1 333 aa8.04□□□□□ -1.12
CD44-205ENST00000352818 ZRANB3Q5FWF4 1079 aa8.04□□□□□ -1.12
CD44-205ENST00000352818 KIAA0895LQ68EN5 471 aa8.04□□□□□ -1.12
CD44-205ENST00000352818 PAQR3Q6TCH7 311 aa8.04□□□□□ -1.12
CD44-205ENST00000352818 TPGS1Q6ZTW0 290 aa8.04□□□□□ -1.12
CD44-205ENST00000352818 NUDT18Q6ZVK8 323 aa8.04□□□□□ -1.12
CD44-205ENST00000352818 CHSY3Q70JA7 882 aa8.04□□□□□ -1.12
CD44-205ENST00000352818 LYSMD3Q7Z3D4 306 aa8.04□□□□□ -1.12
CD44-205ENST00000352818 SNX20Q7Z614 316 aa8.04□□□□□ -1.12
CD44-205ENST00000352818 CAMK1DQ8IU85 385 aa8.04□□□□□ -1.12
CD44-205ENST00000352818 PIANPQ8IYJ0 282 aa8.04□□□□□ -1.12
CD44-205ENST00000352818 PELI3Q8N2H9 469 aa8.04□□□□□ -1.12
CD44-205ENST00000352818 SPATA6LQ8N4H0 392 aa8.04□□□□□ -1.12
CD44-205ENST00000352818 STAG3L4Q8TBR4 150 aa8.04□□□□□ -1.12
CD44-205ENST00000352818 CD200R1Q8TD46 325 aa8.04□□□□□ -1.12
CD44-205ENST00000352818 VOPP1Q96AW1 172 aa8.04□□□□□ -1.12
CD44-205ENST00000352818 EID2BQ96D98 161 aa8.04□□□□□ -1.12
CD44-205ENST00000352818 TCTN2Q96GX1 697 aa8.04□□□□□ -1.12
CD44-205ENST00000352818 ZNF641Q96N77 438 aaPredicted RBP8.04□□□□□ -1.12
CD44-205ENST00000352818 OR52B2Q96RD2 323 aa8.04□□□□□ -1.12
CD44-205ENST00000352818 MCCC1Q96RQ3 725 aaPredicted RBP8.04□□□□□ -1.12
CD44-205ENST00000352818 TTC1Q99614 292 aa8.04□□□□□ -1.12
CD44-205ENST00000352818 GPR21Q99679 349 aa8.04□□□□□ -1.12
CD44-205ENST00000352818 SLC12A9Q9BXP2 914 aa8.04□□□□□ -1.12
CD44-205ENST00000352818 GPR63Q9BZJ6 419 aa8.04□□□□□ -1.12
CD44-205ENST00000352818 TM6SF2Q9BZW4 377 aa8.04□□□□□ -1.12
CD44-205ENST00000352818 DENND2DQ9H6A0 471 aaPredicted RBP8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms