RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 DEFA3P59666 94 aa18.26■□□□□ 0.51
SCARF1-202ENST00000348987 C17orf99Q6UX52 265 aa18.26■□□□□ 0.51
SCARF1-202ENST00000348987 LYPD8Q6UX82 237 aa18.26■□□□□ 0.51
SCARF1-202ENST00000348987 AHSA2Q719I0 299 aa18.26■□□□□ 0.51
SCARF1-202ENST00000348987 UBQLNLQ8IYU4 475 aa18.26■□□□□ 0.51
SCARF1-202ENST00000348987 PSMG2Q969U7 264 aa18.26■□□□□ 0.51
SCARF1-202ENST00000348987 ST6GAL2Q96JF0 529 aa18.26■□□□□ 0.51
SCARF1-202ENST00000348987 EGLN2Q96KS0 407 aa18.26■□□□□ 0.51
SCARF1-202ENST00000348987 NUAK2Q9H093 628 aa18.26■□□□□ 0.51
SCARF1-202ENST00000348987 RNF167Q9H6Y7 350 aa18.26■□□□□ 0.51
SCARF1-202ENST00000348987 WBP11Q9Y2W2 641 aaKnown RBP18.26■□□□□ 0.51
SCARF1-202ENST00000348987 ENPP3O14638 875 aa18.26■□□□□ 0.51
SCARF1-202ENST00000348987 FMO4P31512 558 aa18.26■□□□□ 0.51
SCARF1-202ENST00000348987 MRPL19P49406 292 aaKnown RBP18.26■□□□□ 0.51
SCARF1-202ENST00000348987 KRR1Q13601 381 aaKnown RBP18.26■□□□□ 0.51
SCARF1-202ENST00000348987 DDR2Q16832 855 aa18.26■□□□□ 0.51
SCARF1-202ENST00000348987 SOWAHCQ53LP3 525 aaPredicted RBP18.26■□□□□ 0.51
SCARF1-202ENST00000348987 PRSS36Q5K4E3 855 aa18.26■□□□□ 0.51
SCARF1-202ENST00000348987 LRRC8DQ7L1W4 858 aa18.26■□□□□ 0.51
SCARF1-202ENST00000348987 SLC38A6Q8IZM9 456 aa18.26■□□□□ 0.51
SCARF1-202ENST00000348987 FBXO39Q8N4B4 442 aa18.26■□□□□ 0.51
SCARF1-202ENST00000348987 GIPC2Q8TF65 315 aa18.26■□□□□ 0.51
SCARF1-202ENST00000348987 SLC38A4Q969I6 547 aa18.26■□□□□ 0.51
SCARF1-202ENST00000348987 IMP4Q96G21 291 aaKnown RBP18.26■□□□□ 0.51
SCARF1-202ENST00000348987 HBEGFQ99075 208 aa18.26■□□□□ 0.51
SCARF1-202ENST00000348987 SLC25A51Q9H1U9 297 aa18.26■□□□□ 0.51
SCARF1-202ENST00000348987 IKZF5Q9H5V7 419 aa18.26■□□□□ 0.51
SCARF1-202ENST00000348987 ABI2Q9NYB9 513 aaPredicted RBP18.26■□□□□ 0.51
SCARF1-202ENST00000348987 GABRQQ9UN88 632 aa18.26■□□□□ 0.51
SCARF1-202ENST00000348987 COL4A4P53420 1690 aaPredicted RBP18.26■□□□□ 0.51
SCARF1-202ENST00000348987 ITGAMP11215 1152 aa18.25■□□□□ 0.51
SCARF1-202ENST00000348987 ZNF37AP17032 561 aaPredicted RBP18.25■□□□□ 0.51
SCARF1-202ENST00000348987 GADD45AP24522 165 aa18.25■□□□□ 0.51
SCARF1-202ENST00000348987 AGTR2P50052 363 aa18.25■□□□□ 0.51
SCARF1-202ENST00000348987 PRKCDQ05655 676 aa18.25■□□□□ 0.51
SCARF1-202ENST00000348987 CRHR2Q13324 411 aa18.25■□□□□ 0.51
SCARF1-202ENST00000348987 ANKS6Q68DC2 871 aa18.25■□□□□ 0.51
SCARF1-202ENST00000348987 TIGD7Q6NT04 549 aaPredicted RBP18.25■□□□□ 0.51
SCARF1-202ENST00000348987 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.25■□□□□ 0.51
SCARF1-202ENST00000348987 CIR1Q86X95 450 aaPredicted RBP18.25■□□□□ 0.51
SCARF1-202ENST00000348987 SPATA2LQ8IUW3 424 aaPredicted RBP18.25■□□□□ 0.51
SCARF1-202ENST00000348987 IQCF2Q8IXL9 164 aa18.25■□□□□ 0.51
SCARF1-202ENST00000348987 CADM2Q8N3J6 435 aa18.25■□□□□ 0.51
SCARF1-202ENST00000348987 ZNF548Q8NEK5 533 aaPredicted RBP18.25■□□□□ 0.51
SCARF1-202ENST00000348987 ITPAQ9BY32 194 aa18.25■□□□□ 0.51
SCARF1-202ENST00000348987 VNN3Q9NY84 501 aa18.25■□□□□ 0.51
SCARF1-202ENST00000348987 NPAP1Q9NZP6 1156 aa18.25■□□□□ 0.51
SCARF1-202ENST00000348987 GMPPBQ9Y5P6 360 aa18.25■□□□□ 0.51
SCARF1-202ENST00000348987 M0QZQ0 153 aa18.25■□□□□ 0.51
SCARF1-202ENST00000348987 MED26O95402 600 aa18.25■□□□□ 0.51
SCARF1-202ENST00000348987 PIRTP0C851 137 aa18.25■□□□□ 0.51
SCARF1-202ENST00000348987 G6PDP11413 515 aa18.25■□□□□ 0.51
SCARF1-202ENST00000348987 FDXRP22570 491 aa18.25■□□□□ 0.51
SCARF1-202ENST00000348987 MVKQ03426 396 aa18.25■□□□□ 0.51
SCARF1-202ENST00000348987 PWP1Q13610 501 aa18.25■□□□□ 0.51
SCARF1-202ENST00000348987 RFX4Q33E94 735 aa18.25■□□□□ 0.51
SCARF1-202ENST00000348987 BCL7AQ4VC05 210 aa18.25■□□□□ 0.51
SCARF1-202ENST00000348987 ZC3H12BQ5HYM0 836 aaKnown RBP18.25■□□□□ 0.51
SCARF1-202ENST00000348987 AMER2Q8N7J2 671 aa18.25■□□□□ 0.51
SCARF1-202ENST00000348987 SIMC1Q8NDZ2 872 aa18.25■□□□□ 0.51
SCARF1-202ENST00000348987 CCDC115Q96NT0 180 aa18.25■□□□□ 0.51
SCARF1-202ENST00000348987 MYOCQ99972 504 aa18.25■□□□□ 0.51
SCARF1-202ENST00000348987 ATP13A1Q9HD20 1204 aa18.25■□□□□ 0.51
SCARF1-202ENST00000348987 CXCR6O00574 342 aa18.24■□□□□ 0.51
SCARF1-202ENST00000348987 PAPSS2O95340 614 aaPredicted RBP18.24■□□□□ 0.51
SCARF1-202ENST00000348987 EPHA2P29317 976 aa18.24■□□□□ 0.51
SCARF1-202ENST00000348987 UGT2B10P36537 528 aa18.24■□□□□ 0.51
SCARF1-202ENST00000348987 SLC39A12Q504Y0 691 aa18.24■□□□□ 0.51
SCARF1-202ENST00000348987 PGBD5Q8N414 524 aa18.24■□□□□ 0.51
SCARF1-202ENST00000348987 AADATQ8N5Z0 425 aa18.24■□□□□ 0.51
SCARF1-202ENST00000348987 NCLNQ969V3 563 aa18.24■□□□□ 0.51
SCARF1-202ENST00000348987 TBATAQ96M53 351 aa18.24■□□□□ 0.51
SCARF1-202ENST00000348987 CLPBQ9H078 707 aa18.24■□□□□ 0.51
SCARF1-202ENST00000348987 ACTL8Q9H568 366 aa18.24■□□□□ 0.51
SCARF1-202ENST00000348987 ARNT2Q9HBZ2 717 aa18.24■□□□□ 0.51
SCARF1-202ENST00000348987 GALPQ9UBC7 116 aa18.24■□□□□ 0.51
SCARF1-202ENST00000348987 UXTQ9UBK9 157 aaPredicted RBP18.24■□□□□ 0.51
SCARF1-202ENST00000348987 IKZF3Q9UKT9 509 aa18.24■□□□□ 0.51
SCARF1-202ENST00000348987 RNF112Q9ULX5 631 aa18.24■□□□□ 0.51
SCARF1-202ENST00000348987 ERVH48-1M5A8F1 160 aa18.24■□□□□ 0.51
SCARF1-202ENST00000348987 SEMA3DO95025 777 aa18.24■□□□□ 0.51
SCARF1-202ENST00000348987 UROSP10746 265 aa18.24■□□□□ 0.51
SCARF1-202ENST00000348987 THPOP40225 353 aa18.24■□□□□ 0.51
SCARF1-202ENST00000348987 CXCR4P61073 352 aa18.24■□□□□ 0.51
SCARF1-202ENST00000348987 CAP1Q01518 475 aa18.24■□□□□ 0.51
SCARF1-202ENST00000348987 PON2Q15165 354 aa18.24■□□□□ 0.51
SCARF1-202ENST00000348987 Q5BKY6 102 aa18.24■□□□□ 0.51
SCARF1-202ENST00000348987 SIRPB2Q5JXA9 342 aa18.24■□□□□ 0.51
SCARF1-202ENST00000348987 Q6ZSR9 355 aa18.24■□□□□ 0.51
SCARF1-202ENST00000348987 MRPL10Q7Z7H8 261 aaKnown RBP18.24■□□□□ 0.51
SCARF1-202ENST00000348987 HIPK1Q86Z02 1210 aa18.24■□□□□ 0.51
SCARF1-202ENST00000348987 PDLIM5Q96HC4 596 aaKnown RBP18.24■□□□□ 0.51
SCARF1-202ENST00000348987 GIMAP4Q9NUV9 329 aa18.24■□□□□ 0.51
SCARF1-202ENST00000348987 MOSPD1Q9UJG1 213 aa18.24■□□□□ 0.51
SCARF1-202ENST00000348987 RNF6Q9Y252 685 aa18.24■□□□□ 0.51
SCARF1-202ENST00000348987 LOC100506127A0A0U1RQW1 187 aa18.23■□□□□ 0.51
SCARF1-202ENST00000348987 PRSS56P0CW18 603 aa18.23■□□□□ 0.51
SCARF1-202ENST00000348987 GRK4P32298 578 aa18.23■□□□□ 0.51
SCARF1-202ENST00000348987 IFNA8P32881 189 aa18.23■□□□□ 0.51
SCARF1-202ENST00000348987 KRT20P35900 424 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms