RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 VCLP18206 1134 aa9.03□□□□□ -0.96
ATG4A-202ENST00000345734 NFKBIAP25963 317 aa9.03□□□□□ -0.96
ATG4A-202ENST00000345734 ITGB7P26010 798 aa9.03□□□□□ -0.96
ATG4A-202ENST00000345734 ADSLP30566 484 aaPredicted RBP9.03□□□□□ -0.96
ATG4A-202ENST00000345734 NME5P56597 212 aa9.03□□□□□ -0.96
ATG4A-202ENST00000345734 GTF2H2Q13888 395 aa9.03□□□□□ -0.96
ATG4A-202ENST00000345734 BOP1Q14137 746 aaKnown RBP9.03□□□□□ -0.96
ATG4A-202ENST00000345734 PTK2BQ14289 1009 aa9.03□□□□□ -0.96
ATG4A-202ENST00000345734 HERC3Q15034 1050 aa9.03□□□□□ -0.96
ATG4A-202ENST00000345734 EIF4HQ15056 248 aaKnown RBP9.03□□□□□ -0.96
ATG4A-202ENST00000345734 PCBP2Q15366 365 aaKnown RBP eCLIP9.03□□□□□ -0.96
ATG4A-202ENST00000345734 GTF2H2CQ6P1K8 395 aa9.03□□□□□ -0.96
ATG4A-202ENST00000345734 LETMD1Q6P1Q0 360 aa9.03□□□□□ -0.96
ATG4A-202ENST00000345734 GPRIN3Q6ZVF9 776 aa9.03□□□□□ -0.96
ATG4A-202ENST00000345734 YAF2Q8IY57 180 aa9.03□□□□□ -0.96
ATG4A-202ENST00000345734 CDYL2Q8N8U2 506 aa9.03□□□□□ -0.96
ATG4A-202ENST00000345734 TMIEQ8NEW7 156 aa9.03□□□□□ -0.96
ATG4A-202ENST00000345734 OR9I1Q8NGQ6 314 aa9.03□□□□□ -0.96
ATG4A-202ENST00000345734 RHBDF1Q96CC6 855 aa9.03□□□□□ -0.96
ATG4A-202ENST00000345734 AP2M1Q96CW1 435 aa9.03□□□□□ -0.96
ATG4A-202ENST00000345734 NPAS2Q99743 824 aa9.03□□□□□ -0.96
ATG4A-202ENST00000345734 TMEM79Q9BSE2 394 aa9.03□□□□□ -0.96
ATG4A-202ENST00000345734 ZSCAN5AQ9BUG6 496 aa9.03□□□□□ -0.96
ATG4A-202ENST00000345734 RNPEPL1Q9HAU8 725 aa9.03□□□□□ -0.96
ATG4A-202ENST00000345734 CACNA2D2Q9NY47 1150 aa9.03□□□□□ -0.96
ATG4A-202ENST00000345734 CLEC1BQ9P126 229 aa9.03□□□□□ -0.96
ATG4A-202ENST00000345734 PACSIN3Q9UKS6 424 aa9.03□□□□□ -0.96
ATG4A-202ENST00000345734 TRPM6Q9BX84 2022 aa9.03□□□□□ -0.96
ATG4A-202ENST00000345734 KRT87PA6NCN2 255 aa9.02□□□□□ -0.96
ATG4A-202ENST00000345734 TMEM202A6NGA9 273 aa9.02□□□□□ -0.96
ATG4A-202ENST00000345734 PSMD12O00232 456 aaPredicted RBP9.02□□□□□ -0.96
ATG4A-202ENST00000345734 INPP4BO15327 924 aa9.02□□□□□ -0.96
ATG4A-202ENST00000345734 KRT36O76013 467 aa9.02□□□□□ -0.96
ATG4A-202ENST00000345734 KAT7O95251 611 aa9.02□□□□□ -0.96
ATG4A-202ENST00000345734 CBSLP0DN79 551 aa9.02□□□□□ -0.96
ATG4A-202ENST00000345734 UROSP10746 265 aa9.02□□□□□ -0.96
ATG4A-202ENST00000345734 MSH3P20585 1137 aa9.02□□□□□ -0.96
ATG4A-202ENST00000345734 GDI1P31150 447 aa9.02□□□□□ -0.96
ATG4A-202ENST00000345734 CBSP35520 551 aa9.02□□□□□ -0.96
ATG4A-202ENST00000345734 ARL1P40616 181 aaPredicted RBP9.02□□□□□ -0.96
ATG4A-202ENST00000345734 TBL3Q12788 808 aaKnown RBP9.02□□□□□ -0.96
ATG4A-202ENST00000345734 FASTKQ14296 549 aaKnown RBP9.02□□□□□ -0.96
ATG4A-202ENST00000345734 GBX1Q14549 363 aa9.02□□□□□ -0.96
ATG4A-202ENST00000345734 ELAVL3Q14576 367 aaKnown RBP9.02□□□□□ -0.96
ATG4A-202ENST00000345734 ZNF284Q2VY69 593 aa9.02□□□□□ -0.96
ATG4A-202ENST00000345734 AGKQ53H12 422 aa9.02□□□□□ -0.96
ATG4A-202ENST00000345734 ATAT1Q5SQI0 421 aa9.02□□□□□ -0.96
ATG4A-202ENST00000345734 EGFLAMQ63HQ2 1017 aa9.02□□□□□ -0.96
ATG4A-202ENST00000345734 PAOXQ6QHF9 649 aa9.02□□□□□ -0.96
ATG4A-202ENST00000345734 NET1Q7Z628 596 aaPredicted RBP9.02□□□□□ -0.96
ATG4A-202ENST00000345734 MMAAQ8IVH4 418 aaKnown RBP9.02□□□□□ -0.96
ATG4A-202ENST00000345734 SULF2Q8IWU5 870 aa9.02□□□□□ -0.96
ATG4A-202ENST00000345734 DSELQ8IZU8 1212 aa9.02□□□□□ -0.96
ATG4A-202ENST00000345734 KYQ8NBH2 561 aa9.02□□□□□ -0.96
ATG4A-202ENST00000345734 DDHD1Q8NEL9 900 aa9.02□□□□□ -0.96
ATG4A-202ENST00000345734 SKA2Q8WVK7 121 aaPredicted RBP9.02□□□□□ -0.96
ATG4A-202ENST00000345734 BTN2A2Q8WVV5 523 aa9.02□□□□□ -0.96
ATG4A-202ENST00000345734 TIFAQ96CG3 184 aa9.02□□□□□ -0.96
ATG4A-202ENST00000345734 TUBGCP3Q96CW5 907 aa9.02□□□□□ -0.96
ATG4A-202ENST00000345734 ZNF382Q96SR6 550 aa9.02□□□□□ -0.96
ATG4A-202ENST00000345734 MIR1-1HGQ9H1L0 117 aa9.02□□□□□ -0.96
ATG4A-202ENST00000345734 WWOXQ9NZC7 414 aa9.02□□□□□ -0.96
ATG4A-202ENST00000345734 CCDC167Q9P0B6 97 aa9.02□□□□□ -0.96
ATG4A-202ENST00000345734 SPATA7Q9P0W8 599 aa9.02□□□□□ -0.96
ATG4A-202ENST00000345734 KLHL42Q9P2K6 505 aa9.02□□□□□ -0.96
ATG4A-202ENST00000345734 NFKBIL1Q9UBC1 381 aaPredicted RBP9.02□□□□□ -0.96
ATG4A-202ENST00000345734 TNPO3Q9Y5L0 923 aaKnown RBP9.02□□□□□ -0.96
ATG4A-202ENST00000345734 TICRRQ7Z2Z1 1910 aa9.02□□□□□ -0.97
ATG4A-202ENST00000345734 TRIOO75962 3097 aa9.02□□□□□ -0.97
ATG4A-202ENST00000345734 K7ESM1 405 aa9.02□□□□□ -0.97
ATG4A-202ENST00000345734 WNT9AO14904 365 aa9.02□□□□□ -0.97
ATG4A-202ENST00000345734 CCNT2O60583 730 aaKnown RBP9.02□□□□□ -0.97
ATG4A-202ENST00000345734 KATNA1O75449 491 aa9.02□□□□□ -0.97
ATG4A-202ENST00000345734 CIB2O75838 187 aa9.02□□□□□ -0.97
ATG4A-202ENST00000345734 EPHX1P07099 455 aa9.02□□□□□ -0.97
ATG4A-202ENST00000345734 ADRB3P13945 408 aa9.02□□□□□ -0.97
ATG4A-202ENST00000345734 PSMC3P17980 439 aa9.02□□□□□ -0.97
ATG4A-202ENST00000345734 WASP42768 502 aa9.02□□□□□ -0.97
ATG4A-202ENST00000345734 SOX9P48436 509 aa9.02□□□□□ -0.97
ATG4A-202ENST00000345734 PSMD8P48556 350 aa9.02□□□□□ -0.97
ATG4A-202ENST00000345734 CTSCP53634 463 aa9.02□□□□□ -0.97
ATG4A-202ENST00000345734 NAA20P61599 178 aa9.02□□□□□ -0.97
ATG4A-202ENST00000345734 ADAM15Q13444 863 aa9.02□□□□□ -0.97
ATG4A-202ENST00000345734 CRY1Q16526 586 aa9.02□□□□□ -0.97
ATG4A-202ENST00000345734 PGM2L1Q6PCE3 622 aa9.02□□□□□ -0.97
ATG4A-202ENST00000345734 UBE2R2Q712K3 238 aaPredicted RBP9.02□□□□□ -0.97
ATG4A-202ENST00000345734 CACUL1Q86Y37 369 aa9.02□□□□□ -0.97
ATG4A-202ENST00000345734 RASGEF1AQ8N9B8 481 aa9.02□□□□□ -0.97
ATG4A-202ENST00000345734 OR4F6Q8NGB9 312 aa9.02□□□□□ -0.97
ATG4A-202ENST00000345734 OR2T11Q8NH01 316 aa9.02□□□□□ -0.97
ATG4A-202ENST00000345734 DTX3LQ8TDB6 740 aa9.02□□□□□ -0.97
ATG4A-202ENST00000345734 SUSD6Q92537 303 aa9.02□□□□□ -0.97
ATG4A-202ENST00000345734 ELMO1Q92556 727 aa9.02□□□□□ -0.97
ATG4A-202ENST00000345734 NKD1Q969G9 470 aa9.02□□□□□ -0.97
ATG4A-202ENST00000345734 GLYATL1Q969I3 302 aa9.02□□□□□ -0.97
ATG4A-202ENST00000345734 DTD2Q96FN9 168 aa9.02□□□□□ -0.97
ATG4A-202ENST00000345734 SLC45A3Q96JT2 553 aa9.02□□□□□ -0.97
ATG4A-202ENST00000345734 COQ10AQ96MF6 247 aa9.02□□□□□ -0.97
ATG4A-202ENST00000345734 S1PR5Q9H228 398 aa9.02□□□□□ -0.97
ATG4A-202ENST00000345734 IPPKQ9H8X2 491 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms