RNA–Protein interactions for RNA: ENST00000344791.6

LYSMD4-202, Transcript of LysM domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LYSMD4, Length 2,885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-202ENST00000344791 C2orf49Q9BVC5 232 aaPredicted RBP18.68■□□□□ 0.58
LYSMD4-202ENST00000344791 MRPL9Q9BYD2 267 aaKnown RBP18.68■□□□□ 0.58
LYSMD4-202ENST00000344791 MYO1GB0I1T2 1018 aa18.68■□□□□ 0.58
LYSMD4-202ENST00000344791 PSMA3P25788 255 aa18.68■□□□□ 0.58
LYSMD4-202ENST00000344791 RETSATQ6NUM9 610 aa18.68■□□□□ 0.58
LYSMD4-202ENST00000344791 BBS7Q8IWZ6 715 aa18.68■□□□□ 0.58
LYSMD4-202ENST00000344791 ALDH16A1Q8IZ83 802 aa18.68■□□□□ 0.58
LYSMD4-202ENST00000344791 BBS2Q9BXC9 721 aa18.68■□□□□ 0.58
LYSMD4-202ENST00000344791 ELOVL6Q9H5J4 265 aa18.68■□□□□ 0.58
LYSMD4-202ENST00000344791 GPRC5BQ9NZH0 403 aa18.68■□□□□ 0.58
LYSMD4-202ENST00000344791 XPNPEP2O43895 674 aa18.67■□□□□ 0.58
LYSMD4-202ENST00000344791 WDR47O94967 919 aa18.67■□□□□ 0.58
LYSMD4-202ENST00000344791 HNRNPCP07910 306 aaKnown RBP eCLIP18.67■□□□□ 0.58
LYSMD4-202ENST00000344791 CD9P21926 228 aa18.67■□□□□ 0.58
LYSMD4-202ENST00000344791 DCKP27707 260 aa18.67■□□□□ 0.58
LYSMD4-202ENST00000344791 CCR7P32248 378 aa18.67■□□□□ 0.58
LYSMD4-202ENST00000344791 MRPL19P49406 292 aaKnown RBP18.67■□□□□ 0.58
LYSMD4-202ENST00000344791 FOXD4Q12950 439 aaPredicted RBP18.67■□□□□ 0.58
LYSMD4-202ENST00000344791 ZXDCQ2QGD7 858 aaPredicted RBP18.67■□□□□ 0.58
LYSMD4-202ENST00000344791 CTU2Q2VPK5 515 aaKnown RBP18.67■□□□□ 0.58
LYSMD4-202ENST00000344791 VRK3Q8IV63 474 aa18.67■□□□□ 0.58
LYSMD4-202ENST00000344791 NXPE1Q8N323 547 aa18.67■□□□□ 0.58
LYSMD4-202ENST00000344791 ZNF555Q8NEP9 628 aa18.67■□□□□ 0.58
LYSMD4-202ENST00000344791 CNIH3Q8TBE1 160 aa18.67■□□□□ 0.58
LYSMD4-202ENST00000344791 ADAMTS16Q8TE57 1224 aa18.67■□□□□ 0.58
LYSMD4-202ENST00000344791 ALG14Q96F25 216 aa18.67■□□□□ 0.58
LYSMD4-202ENST00000344791 IGSF21Q96ID5 467 aa18.67■□□□□ 0.58
LYSMD4-202ENST00000344791 BARD1Q99728 777 aaKnown RBP18.67■□□□□ 0.58
LYSMD4-202ENST00000344791 C1orf109Q9NX04 203 aa18.67■□□□□ 0.58
LYSMD4-202ENST00000344791 UNC80Q8N2C7 3258 aa18.67■□□□□ 0.58
LYSMD4-202ENST00000344791 DYTNA2CJ06 578 aa18.67■□□□□ 0.58
LYSMD4-202ENST00000344791 CREG1O75629 220 aa18.67■□□□□ 0.58
LYSMD4-202ENST00000344791 CLDN9O95484 217 aa18.67■□□□□ 0.58
LYSMD4-202ENST00000344791 C7P10643 843 aa18.67■□□□□ 0.58
LYSMD4-202ENST00000344791 SPAM1P38567 509 aa18.67■□□□□ 0.58
LYSMD4-202ENST00000344791 AP1S1P61966 158 aa18.67■□□□□ 0.58
LYSMD4-202ENST00000344791 SIM2Q14190 667 aaPredicted RBP18.67■□□□□ 0.58
LYSMD4-202ENST00000344791 BROXQ5VW32 411 aa18.67■□□□□ 0.58
LYSMD4-202ENST00000344791 CES5AQ6NT32 575 aa18.67■□□□□ 0.58
LYSMD4-202ENST00000344791 ZNF773Q6PK81 442 aa18.67■□□□□ 0.58
LYSMD4-202ENST00000344791 UBE2R2Q712K3 238 aaPredicted RBP18.67■□□□□ 0.58
LYSMD4-202ENST00000344791 BEND7Q8N7W2 519 aaPredicted RBP18.67■□□□□ 0.58
LYSMD4-202ENST00000344791 SLC28A1O00337 649 aa18.67■□□□□ 0.58
LYSMD4-202ENST00000344791 IFRD1O00458 451 aaPredicted RBP18.67■□□□□ 0.58
LYSMD4-202ENST00000344791 ANXA5P08758 320 aa18.67■□□□□ 0.58
LYSMD4-202ENST00000344791 COL6A1P12109 1028 aa18.67■□□□□ 0.58
LYSMD4-202ENST00000344791 FSHRP23945 695 aa18.67■□□□□ 0.58
LYSMD4-202ENST00000344791 RPS14P62263 151 aaKnown RBP18.67■□□□□ 0.58
LYSMD4-202ENST00000344791 LMAN2Q12907 356 aa18.67■□□□□ 0.58
LYSMD4-202ENST00000344791 FXNQ16595 210 aa18.67■□□□□ 0.58
LYSMD4-202ENST00000344791 OR4F3Q6IEY1 312 aa18.67■□□□□ 0.58
LYSMD4-202ENST00000344791 ANKRD26P1Q6NSI1 321 aa18.67■□□□□ 0.58
LYSMD4-202ENST00000344791 DCAF4L2Q8NA75 395 aa18.67■□□□□ 0.58
LYSMD4-202ENST00000344791 MBOAT4Q96T53 435 aa18.67■□□□□ 0.58
LYSMD4-202ENST00000344791 ZDHHC6Q9H6R6 413 aa18.67■□□□□ 0.58
LYSMD4-202ENST00000344791 DNAJB9Q9UBS3 223 aa18.67■□□□□ 0.58
LYSMD4-202ENST00000344791 PDE10AQ9Y233 779 aa18.67■□□□□ 0.58
LYSMD4-202ENST00000344791 SLC22A14Q9Y267 594 aa18.67■□□□□ 0.58
LYSMD4-202ENST00000344791 SCN5AQ14524 2016 aa18.66■□□□□ 0.58
LYSMD4-202ENST00000344791 TRIM64A6NGJ6 449 aa18.66■□□□□ 0.58
LYSMD4-202ENST00000344791 H0YAE9 185 aa18.66■□□□□ 0.58
LYSMD4-202ENST00000344791 CRHBPP24387 322 aa18.66■□□□□ 0.58
LYSMD4-202ENST00000344791 S100A3P33764 101 aa18.66■□□□□ 0.58
LYSMD4-202ENST00000344791 CD47Q08722 323 aa18.66■□□□□ 0.58
LYSMD4-202ENST00000344791 DOK6Q6PKX4 331 aa18.66■□□□□ 0.58
LYSMD4-202ENST00000344791 SERPINA13PQ6UXR4 307 aa18.66■□□□□ 0.58
LYSMD4-202ENST00000344791 MICU2Q8IYU8 434 aa18.66■□□□□ 0.58
LYSMD4-202ENST00000344791 CMTM8Q8IZV2 173 aa18.66■□□□□ 0.58
LYSMD4-202ENST00000344791 APIPQ96GX9 242 aa18.66■□□□□ 0.58
LYSMD4-202ENST00000344791 CLMPQ9H6B4 373 aa18.66■□□□□ 0.58
LYSMD4-202ENST00000344791 PLGRKTQ9HBL7 147 aa18.66■□□□□ 0.58
LYSMD4-202ENST00000344791 CFAP97Q9P2B7 532 aa18.66■□□□□ 0.58
LYSMD4-202ENST00000344791 MYOFQ9NZM1 2061 aa18.66■□□□□ 0.58
LYSMD4-202ENST00000344791 EPORP19235 508 aa18.66■□□□□ 0.58
LYSMD4-202ENST00000344791 CCNA2P20248 432 aa18.66■□□□□ 0.58
LYSMD4-202ENST00000344791 GABRR2P28476 465 aa18.66■□□□□ 0.58
LYSMD4-202ENST00000344791 LSM3P62310 102 aaKnown RBP18.66■□□□□ 0.58
LYSMD4-202ENST00000344791 POM121L1PQ3SYA9 428 aa18.66■□□□□ 0.58
LYSMD4-202ENST00000344791 USP39Q53GS9 565 aaKnown RBP18.66■□□□□ 0.58
LYSMD4-202ENST00000344791 ZNF648Q5T619 568 aaPredicted RBP18.66■□□□□ 0.58
LYSMD4-202ENST00000344791 XAF1Q6GPH4 301 aa18.66■□□□□ 0.58
LYSMD4-202ENST00000344791 CRTC1Q6UUV9 634 aa18.66■□□□□ 0.58
LYSMD4-202ENST00000344791 TBC1D15Q8TC07 691 aa18.66■□□□□ 0.58
LYSMD4-202ENST00000344791 FNDC8Q8TC99 324 aa18.66■□□□□ 0.58
LYSMD4-202ENST00000344791 GIPC3Q8TF64 312 aa18.66■□□□□ 0.58
LYSMD4-202ENST00000344791 TANKQ92844 425 aa18.66■□□□□ 0.58
LYSMD4-202ENST00000344791 FOXJ1Q92949 421 aa18.66■□□□□ 0.58
LYSMD4-202ENST00000344791 ATP13A3Q9H7F0 1226 aa18.66■□□□□ 0.58
LYSMD4-202ENST00000344791 KAT8Q9H7Z6 458 aaKnown RBP18.66■□□□□ 0.58
LYSMD4-202ENST00000344791 hCG_2039718K7EN88 272 aa18.65■□□□□ 0.58
LYSMD4-202ENST00000344791 NRG2O14511 850 aaPredicted RBP18.65■□□□□ 0.58
LYSMD4-202ENST00000344791 FTH1P02794 183 aa18.65■□□□□ 0.58
LYSMD4-202ENST00000344791 IL6P05231 212 aa18.65■□□□□ 0.58
LYSMD4-202ENST00000344791 UGT2B4P06133 528 aa18.65■□□□□ 0.58
LYSMD4-202ENST00000344791 GSSP48637 474 aa18.65■□□□□ 0.58
LYSMD4-202ENST00000344791 IL5RAQ01344 420 aa18.65■□□□□ 0.58
LYSMD4-202ENST00000344791 NFATC3Q12968 1075 aa18.65■□□□□ 0.58
LYSMD4-202ENST00000344791 ATP1A4Q13733 1029 aa18.65■□□□□ 0.58
LYSMD4-202ENST00000344791 PTCHD3Q3KNS1 767 aa18.65■□□□□ 0.58
LYSMD4-202ENST00000344791 RUNDC3AQ59EK9 446 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms