RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 KLHL1Q9NR64 748 aa12.17□□□□□ -0.46
SNRNP48-201ENST00000342415 DYTNA2CJ06 578 aa12.17□□□□□ -0.46
SNRNP48-201ENST00000342415 ERAL1O75616 437 aaKnown RBP12.17□□□□□ -0.46
SNRNP48-201ENST00000342415 ARCN1P48444 511 aaKnown RBP12.17□□□□□ -0.46
SNRNP48-201ENST00000342415 ERVPABLB-1P60509 514 aa12.17□□□□□ -0.46
SNRNP48-201ENST00000342415 SMARCB1Q12824 385 aa12.17□□□□□ -0.46
SNRNP48-201ENST00000342415 CHRNA6Q15825 494 aa12.17□□□□□ -0.46
SNRNP48-201ENST00000342415 PDCD4Q53EL6 469 aaKnown RBP12.17□□□□□ -0.46
SNRNP48-201ENST00000342415 UBXN11Q5T124 520 aa12.17□□□□□ -0.46
SNRNP48-201ENST00000342415 FUNDC1Q8IVP5 155 aa12.17□□□□□ -0.46
SNRNP48-201ENST00000342415 RGL4Q8IZJ4 473 aa12.17□□□□□ -0.46
SNRNP48-201ENST00000342415 SOCS4Q8WXH5 440 aa12.17□□□□□ -0.46
SNRNP48-201ENST00000342415 COL26A1Q96A83 441 aa12.17□□□□□ -0.46
SNRNP48-201ENST00000342415 YME1L1Q96TA2 773 aa12.17□□□□□ -0.46
SNRNP48-201ENST00000342415 CNPPD1Q9BV87 410 aa12.17□□□□□ -0.46
SNRNP48-201ENST00000342415 LTB4R2Q9NPC1 389 aa12.17□□□□□ -0.46
SNRNP48-201ENST00000342415 C11orf16Q9NQ32 467 aa12.17□□□□□ -0.46
SNRNP48-201ENST00000342415 TMEM30AQ9NV96 361 aa12.17□□□□□ -0.46
SNRNP48-201ENST00000342415 USP3Q9Y6I4 520 aa12.17□□□□□ -0.46
SNRNP48-201ENST00000342415 GJA1P17302 382 aa12.16□□□□□ -0.46
SNRNP48-201ENST00000342415 MYF6P23409 242 aa12.16□□□□□ -0.46
SNRNP48-201ENST00000342415 OPRL1P41146 370 aa12.16□□□□□ -0.46
SNRNP48-201ENST00000342415 HLCSP50747 726 aa12.16□□□□□ -0.46
SNRNP48-201ENST00000342415 SRP54P61011 504 aaKnown RBP12.16□□□□□ -0.46
SNRNP48-201ENST00000342415 KCTD11Q693B1 232 aa12.16□□□□□ -0.46
SNRNP48-201ENST00000342415 DBF4BQ8NFT6 615 aa12.16□□□□□ -0.46
SNRNP48-201ENST00000342415 ZNF599Q96NL3 588 aa12.16□□□□□ -0.46
SNRNP48-201ENST00000342415 C1QTNF1Q9BXJ1 281 aa12.16□□□□□ -0.46
SNRNP48-201ENST00000342415 CCNB1IP1Q9NPC3 277 aa12.16□□□□□ -0.46
SNRNP48-201ENST00000342415 PCDHB1Q9Y5F3 818 aa12.16□□□□□ -0.46
SNRNP48-201ENST00000342415 DNAJC25-GNG10A0A024R161 153 aa12.16□□□□□ -0.46
SNRNP48-201ENST00000342415 TCRBV3S1A0A5B6 114 aa12.16□□□□□ -0.46
SNRNP48-201ENST00000342415 A8MU76 341 aa12.16□□□□□ -0.46
SNRNP48-201ENST00000342415 C8BP07358 591 aa12.16□□□□□ -0.46
SNRNP48-201ENST00000342415 GATMP50440 423 aa12.16□□□□□ -0.46
SNRNP48-201ENST00000342415 TIGD6Q17RP2 521 aa12.16□□□□□ -0.46
SNRNP48-201ENST00000342415 HKDC1Q2TB90 917 aa12.16□□□□□ -0.46
SNRNP48-201ENST00000342415 PYDC2Q56P42 97 aa12.16□□□□□ -0.46
SNRNP48-201ENST00000342415 DDI2Q5TDH0 399 aa12.16□□□□□ -0.46
SNRNP48-201ENST00000342415 OR2T5Q6IEZ7 315 aa12.16□□□□□ -0.46
SNRNP48-201ENST00000342415 LETMD1Q6P1Q0 360 aa12.16□□□□□ -0.46
SNRNP48-201ENST00000342415 FUT10Q6P4F1 479 aa12.16□□□□□ -0.46
SNRNP48-201ENST00000342415 OR2T29Q8NH02 315 aa12.16□□□□□ -0.46
SNRNP48-201ENST00000342415 FUBP1Q96AE4 644 aaKnown RBP12.16□□□□□ -0.46
SNRNP48-201ENST00000342415 TMEM125Q96AQ2 219 aa12.16□□□□□ -0.46
SNRNP48-201ENST00000342415 SDR39U1Q9NRG7 319 aaPredicted RBP12.16□□□□□ -0.46
SNRNP48-201ENST00000342415 CLN6Q9NWW5 311 aa12.16□□□□□ -0.46
SNRNP48-201ENST00000342415 VAPAQ9P0L0 249 aa12.16□□□□□ -0.46
SNRNP48-201ENST00000342415 RHCGQ9UBD6 479 aa12.16□□□□□ -0.46
SNRNP48-201ENST00000342415 A0A0U1RQF3 1178 aa12.16□□□□□ -0.46
SNRNP48-201ENST00000342415 FUOMA2VDF0 154 aa12.16□□□□□ -0.46
SNRNP48-201ENST00000342415 GJB5O95377 273 aa12.16□□□□□ -0.46
SNRNP48-201ENST00000342415 MYL12AP19105 171 aa12.16□□□□□ -0.46
SNRNP48-201ENST00000342415 GABRR2P28476 465 aa12.16□□□□□ -0.46
SNRNP48-201ENST00000342415 MAPKAPK2P49137 400 aa12.16□□□□□ -0.46
SNRNP48-201ENST00000342415 PLA2G16P53816 162 aa12.16□□□□□ -0.46
SNRNP48-201ENST00000342415 CDH4P55283 916 aa12.16□□□□□ -0.46
SNRNP48-201ENST00000342415 SNRPD1P62314 119 aaKnown RBP12.16□□□□□ -0.46
SNRNP48-201ENST00000342415 TBC1D25Q3MII6 688 aa12.16□□□□□ -0.46
SNRNP48-201ENST00000342415 CERS6Q6ZMG9 384 aa12.16□□□□□ -0.46
SNRNP48-201ENST00000342415 CYP2U1Q7Z449 544 aa12.16□□□□□ -0.46
SNRNP48-201ENST00000342415 VTCN1Q7Z7D3 282 aa12.16□□□□□ -0.46
SNRNP48-201ENST00000342415 SCD5Q86SK9 330 aa12.16□□□□□ -0.46
SNRNP48-201ENST00000342415 UPF1Q92900 1129 aaKnown RBP eCLIP12.16□□□□□ -0.46
SNRNP48-201ENST00000342415 CDK5RAP1Q96SZ6 601 aaKnown RBP12.16□□□□□ -0.46
SNRNP48-201ENST00000342415 EMILIN2Q9BXX0 1053 aa12.16□□□□□ -0.46
SNRNP48-201ENST00000342415 SNTG1Q9NSN8 517 aa12.16□□□□□ -0.46
SNRNP48-201ENST00000342415 DNAJC11Q9NVH1 559 aa12.16□□□□□ -0.46
SNRNP48-201ENST00000342415 FAM118AQ9NWS6 357 aa12.16□□□□□ -0.46
SNRNP48-201ENST00000342415 KCNE2Q9Y6J6 123 aa12.16□□□□□ -0.46
SNRNP48-201ENST00000342415 MAST2Q6P0Q8 1798 aa12.16□□□□□ -0.46
SNRNP48-201ENST00000342415 PAPPAQ13219 1627 aa12.16□□□□□ -0.46
SNRNP48-201ENST00000342415 AP2A2O94973 939 aa12.15□□□□□ -0.46
SNRNP48-201ENST00000342415 VIPP01282 170 aa12.15□□□□□ -0.46
SNRNP48-201ENST00000342415 HTR7P34969 479 aa12.15□□□□□ -0.46
SNRNP48-201ENST00000342415 ILF2Q12905 390 aaKnown RBP12.15□□□□□ -0.46
SNRNP48-201ENST00000342415 BTG3Q14201 252 aaPredicted RBP12.15□□□□□ -0.46
SNRNP48-201ENST00000342415 GRM2Q14416 872 aa12.15□□□□□ -0.46
SNRNP48-201ENST00000342415 SETMARQ53H47 684 aaPredicted RBP12.15□□□□□ -0.46
SNRNP48-201ENST00000342415 RBM48Q5RL73 367 aaKnown RBP12.15□□□□□ -0.46
SNRNP48-201ENST00000342415 HMBOX1Q6NT76 420 aa12.15□□□□□ -0.46
SNRNP48-201ENST00000342415 EPHX4Q8IUS5 362 aa12.15□□□□□ -0.46
SNRNP48-201ENST00000342415 SVOPLQ8N434 492 aa12.15□□□□□ -0.46
SNRNP48-201ENST00000342415 ST13P5Q8NFI4 369 aaPredicted RBP12.15□□□□□ -0.46
SNRNP48-201ENST00000342415 TEX37Q96LM6 180 aa12.15□□□□□ -0.46
SNRNP48-201ENST00000342415 BOCQ9BWV1 1114 aa12.15□□□□□ -0.46
SNRNP48-201ENST00000342415 CLEC4AQ9UMR7 237 aa12.15□□□□□ -0.46
SNRNP48-201ENST00000342415 PCDHGA8Q9Y5G5 932 aa12.15□□□□□ -0.46
SNRNP48-201ENST00000342415 STRCP1A6NGW2 1772 aa12.15□□□□□ -0.46
SNRNP48-201ENST00000342415 BTAF1O14981 1849 aa12.15□□□□□ -0.46
SNRNP48-201ENST00000342415 A0A0G2JN53 185 aa12.15□□□□□ -0.46
SNRNP48-201ENST00000342415 MYADML2A6NDP7 307 aa12.15□□□□□ -0.46
SNRNP48-201ENST00000342415 GLTPD2A6NH11 291 aa12.15□□□□□ -0.46
SNRNP48-201ENST00000342415 ZXDBP98169 803 aa12.15□□□□□ -0.46
SNRNP48-201ENST00000342415 ELP6Q0PNE2 266 aa12.15□□□□□ -0.46
SNRNP48-201ENST00000342415 PTCHD3Q3KNS1 767 aa12.15□□□□□ -0.46
SNRNP48-201ENST00000342415 TIMM50Q3ZCQ8 353 aa12.15□□□□□ -0.46
SNRNP48-201ENST00000342415 LCN8Q6JVE9 175 aa12.15□□□□□ -0.46
SNRNP48-201ENST00000342415 ZNF366Q8N895 744 aa12.15□□□□□ -0.46
SNRNP48-201ENST00000342415 ABHD11Q8NFV4 315 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms