RNA–Protein interactions for RNA: ENST00000341372.7

TPM3-207, Transcript of tropomyosin 3, humanhuman

TSL 5 BASIC

Gene TPM3, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-207ENST00000341372 MAGED1Q9Y5V3 778 aaPredicted RBP10.06□□□□□ -0.8
TPM3-207ENST00000341372 KCNJ13O60928 360 aa10.06□□□□□ -0.8
TPM3-207ENST00000341372 INMTO95050 263 aa10.06□□□□□ -0.8
TPM3-207ENST00000341372 POLBP06746 335 aa10.06□□□□□ -0.8
TPM3-207ENST00000341372 ZNF7P17097 686 aaPredicted RBP10.06□□□□□ -0.8
TPM3-207ENST00000341372 MC4RP32245 332 aa10.06□□□□□ -0.8
TPM3-207ENST00000341372 MAZP56270 477 aaKnown RBP10.06□□□□□ -0.8
TPM3-207ENST00000341372 CLDN6P56747 220 aa10.06□□□□□ -0.8
TPM3-207ENST00000341372 SKIDA1Q1XH10 827 aa10.06□□□□□ -0.8
TPM3-207ENST00000341372 BCL7AQ4VC05 210 aa10.06□□□□□ -0.8
TPM3-207ENST00000341372 LRRC8BQ6P9F7 803 aa10.06□□□□□ -0.8
TPM3-207ENST00000341372 CRTC3Q6UUV7 619 aa10.06□□□□□ -0.8
TPM3-207ENST00000341372 NLRP9Q7RTR0 991 aa10.06□□□□□ -0.8
TPM3-207ENST00000341372 ZNF572Q7Z3I7 529 aaPredicted RBP10.06□□□□□ -0.8
TPM3-207ENST00000341372 ARL14Q8N4G2 192 aa10.06□□□□□ -0.8
TPM3-207ENST00000341372 PPM1NQ8N819 430 aa10.06□□□□□ -0.8
TPM3-207ENST00000341372 RASGEF1AQ8N9B8 481 aa10.06□□□□□ -0.8
TPM3-207ENST00000341372 ZNF514Q96K75 400 aaPredicted RBP10.06□□□□□ -0.8
TPM3-207ENST00000341372 CHCHD6Q9BRQ6 235 aa10.06□□□□□ -0.8
TPM3-207ENST00000341372 TBC1D29Q9UFV1 150 aa10.06□□□□□ -0.8
TPM3-207ENST00000341372 SLC23A2Q9UGH3 650 aa10.06□□□□□ -0.8
TPM3-207ENST00000341372 PCYOX1Q9UHG3 505 aa10.06□□□□□ -0.8
TPM3-207ENST00000341372 CRLS1Q9UJA2 301 aa10.06□□□□□ -0.8
TPM3-207ENST00000341372 CLCA2Q9UQC9 943 aa10.06□□□□□ -0.8
TPM3-207ENST00000341372 KCNK6Q9Y257 313 aa10.06□□□□□ -0.8
TPM3-207ENST00000341372 TCAF1Q9Y4C2 921 aa10.06□□□□□ -0.8
TPM3-207ENST00000341372 RNF215Q9Y6U7 377 aa10.06□□□□□ -0.8
TPM3-207ENST00000341372 PIKFYVEQ9Y2I7 2098 aa10.06□□□□□ -0.8
TPM3-207ENST00000341372 UNC13CQ8NB66 2214 aa10.05□□□□□ -0.8
TPM3-207ENST00000341372 TCRBV7S3A2A0A539 114 aa10.05□□□□□ -0.8
TPM3-207ENST00000341372 B4E171 279 aa10.05□□□□□ -0.8
TPM3-207ENST00000341372 SGTAO43765 313 aa10.05□□□□□ -0.8
TPM3-207ENST00000341372 EML2O95834 649 aa10.05□□□□□ -0.8
TPM3-207ENST00000341372 MT-CO3P00414 261 aa10.05□□□□□ -0.8
TPM3-207ENST00000341372 F3P13726 295 aa10.05□□□□□ -0.8
TPM3-207ENST00000341372 CNTFP26441 200 aa10.05□□□□□ -0.8
TPM3-207ENST00000341372 FOXN2P32314 431 aa10.05□□□□□ -0.8
TPM3-207ENST00000341372 TSPAN7P41732 249 aa10.05□□□□□ -0.8
TPM3-207ENST00000341372 CTSCP53634 463 aa10.05□□□□□ -0.8
TPM3-207ENST00000341372 B4GALNT1Q00973 533 aa10.05□□□□□ -0.8
TPM3-207ENST00000341372 GPS1Q13098 491 aa10.05□□□□□ -0.8
TPM3-207ENST00000341372 TRIP13Q15645 432 aaPredicted RBP10.05□□□□□ -0.8
TPM3-207ENST00000341372 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.05□□□□□ -0.8
TPM3-207ENST00000341372 TSTD2Q5T7W7 516 aa10.05□□□□□ -0.8
TPM3-207ENST00000341372 WASH2PQ6VEQ5 465 aa10.05□□□□□ -0.8
TPM3-207ENST00000341372 SYT9Q86SS6 491 aa10.05□□□□□ -0.8
TPM3-207ENST00000341372 LIX1LQ8IVB5 337 aa10.05□□□□□ -0.8
TPM3-207ENST00000341372 CACNA2D3Q8IZS8 1091 aa10.05□□□□□ -0.8
TPM3-207ENST00000341372 ZNF527Q8NB42 609 aa10.05□□□□□ -0.8
TPM3-207ENST00000341372 MNS1Q8NEH6 495 aa10.05□□□□□ -0.8
TPM3-207ENST00000341372 GDAP1Q8TB36 358 aa10.05□□□□□ -0.8
TPM3-207ENST00000341372 SLC37A2Q8TED4 501 aa10.05□□□□□ -0.8
TPM3-207ENST00000341372 HEXDCQ8WVB3 486 aa10.05□□□□□ -0.8
TPM3-207ENST00000341372 PATE1Q8WXA2 126 aa10.05□□□□□ -0.8
TPM3-207ENST00000341372 CPT1BQ92523 772 aa10.05□□□□□ -0.8
TPM3-207ENST00000341372 RSRC1Q96IZ7 334 aaKnown RBP10.05□□□□□ -0.8
TPM3-207ENST00000341372 CAPZA3Q96KX2 299 aa10.05□□□□□ -0.8
TPM3-207ENST00000341372 LINC00615Q96LM1 132 aaPredicted RBP10.05□□□□□ -0.8
TPM3-207ENST00000341372 IL22Q9GZX6 179 aa10.05□□□□□ -0.8
TPM3-207ENST00000341372 IPPKQ9H8X2 491 aa10.05□□□□□ -0.8
TPM3-207ENST00000341372 ANKZF1Q9H8Y5 726 aa10.05□□□□□ -0.8
TPM3-207ENST00000341372 MRM3Q9HC36 420 aaKnown RBP10.05□□□□□ -0.8
TPM3-207ENST00000341372 WASH6PQ9NQA3 447 aa10.05□□□□□ -0.8
TPM3-207ENST00000341372 KLC4Q9NSK0 619 aa10.05□□□□□ -0.8
TPM3-207ENST00000341372 RNF14Q9UBS8 474 aa10.05□□□□□ -0.8
TPM3-207ENST00000341372 SLC30A1Q9Y6M5 507 aa10.05□□□□□ -0.8
TPM3-207ENST00000341372 FRYQ5TBA9 3013 aa10.04□□□□□ -0.8
TPM3-207ENST00000341372 KIR2DS5A0A0G2JLQ3 304 aa10.04□□□□□ -0.8
TPM3-207ENST00000341372 A0A0G2JNG1 304 aa10.04□□□□□ -0.8
TPM3-207ENST00000341372 A0A1W2PQM1 296 aa10.04□□□□□ -0.8
TPM3-207ENST00000341372 OR5K4A6NMS3 321 aa10.04□□□□□ -0.8
TPM3-207ENST00000341372 KIR2DS3K7RE56 304 aa10.04□□□□□ -0.8
TPM3-207ENST00000341372 CCL22O00626 93 aa10.04□□□□□ -0.8
TPM3-207ENST00000341372 TMEM63AO94886 807 aa10.04□□□□□ -0.8
TPM3-207ENST00000341372 DLGAP3O95886 979 aa10.04□□□□□ -0.8
TPM3-207ENST00000341372 MLNP12872 115 aa10.04□□□□□ -0.8
TPM3-207ENST00000341372 SLC2A4P14672 509 aa10.04□□□□□ -0.8
TPM3-207ENST00000341372 H2AFXP16104 143 aaPredicted RBP10.04□□□□□ -0.8
TPM3-207ENST00000341372 ACRV1P26436 265 aa10.04□□□□□ -0.8
TPM3-207ENST00000341372 NPY2RP49146 381 aa10.04□□□□□ -0.8
TPM3-207ENST00000341372 PDX1P52945 283 aa10.04□□□□□ -0.8
TPM3-207ENST00000341372 CACNG1Q06432 222 aa10.04□□□□□ -0.8
TPM3-207ENST00000341372 KIR2DS5Q14953 304 aa10.04□□□□□ -0.8
TPM3-207ENST00000341372 INSCQ1MX18 579 aa10.04□□□□□ -0.8
TPM3-207ENST00000341372 PCID2Q5JVF3 399 aa10.04□□□□□ -0.8
TPM3-207ENST00000341372 HIBCHQ6NVY1 386 aaPredicted RBP10.04□□□□□ -0.8
TPM3-207ENST00000341372 IYDQ6PHW0 289 aa10.04□□□□□ -0.8
TPM3-207ENST00000341372 UNQ6494/PRO21346Q6UXR6 183 aa10.04□□□□□ -0.8
TPM3-207ENST00000341372 SPRED1Q7Z699 444 aa10.04□□□□□ -0.8
TPM3-207ENST00000341372 TRAPPC5Q8IUR0 188 aa10.04□□□□□ -0.8
TPM3-207ENST00000341372 PIANPQ8IYJ0 282 aa10.04□□□□□ -0.8
TPM3-207ENST00000341372 CEP112Q8N8E3 955 aa10.04□□□□□ -0.8
TPM3-207ENST00000341372 MCUQ8NE86 351 aa10.04□□□□□ -0.8
TPM3-207ENST00000341372 GRAMD1AQ96CP6 724 aa10.04□□□□□ -0.8
TPM3-207ENST00000341372 ZNF778Q96MU6 729 aa10.04□□□□□ -0.8
TPM3-207ENST00000341372 SARS2Q9NP81 518 aaKnown RBP10.04□□□□□ -0.8
TPM3-207ENST00000341372 TREX1Q9NSU2 369 aa10.04□□□□□ -0.8
TPM3-207ENST00000341372 LRIT1Q9P2V4 623 aa10.04□□□□□ -0.8
TPM3-207ENST00000341372 EPG5Q9HCE0 2579 aa10.04□□□□□ -0.8
TPM3-207ENST00000341372 APC2O95996 2303 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms