RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 PKLRP30613 574 aa16.46■□□□□ 0.23
BRCC3-202ENST00000340647 SHMT2P34897 504 aa16.46■□□□□ 0.23
BRCC3-202ENST00000340647 CSRP3P50461 194 aa16.46■□□□□ 0.23
BRCC3-202ENST00000340647 CDK16Q00536 496 aa16.46■□□□□ 0.23
BRCC3-202ENST00000340647 GBX1Q14549 363 aa16.46■□□□□ 0.23
BRCC3-202ENST00000340647 TYSND1Q2T9J0 566 aa16.46■□□□□ 0.23
BRCC3-202ENST00000340647 DEFB110Q30KQ9 67 aa16.46■□□□□ 0.23
BRCC3-202ENST00000340647 IZUMO3Q5VZ72 239 aa16.46■□□□□ 0.23
BRCC3-202ENST00000340647 CYB5D1Q6P9G0 228 aa16.46■□□□□ 0.23
BRCC3-202ENST00000340647 GSTA5Q7RTV2 222 aa16.46■□□□□ 0.23
BRCC3-202ENST00000340647 DNAJC22Q8N4W6 341 aa16.46■□□□□ 0.23
BRCC3-202ENST00000340647 LPGAT1Q92604 370 aa16.46■□□□□ 0.23
BRCC3-202ENST00000340647 IL17FQ96PD4 163 aa16.46■□□□□ 0.23
BRCC3-202ENST00000340647 CHRNA10Q9GZZ6 450 aa16.46■□□□□ 0.23
BRCC3-202ENST00000340647 SPRTNQ9H040 489 aaPredicted RBP16.46■□□□□ 0.23
BRCC3-202ENST00000340647 IL1RAPL1Q9NZN1 696 aa16.46■□□□□ 0.23
BRCC3-202ENST00000340647 OR6C2Q9NZP2 312 aa16.46■□□□□ 0.23
BRCC3-202ENST00000340647 BFARQ9NZS9 450 aa16.46■□□□□ 0.23
BRCC3-202ENST00000340647 POLG2Q9UHN1 485 aa16.46■□□□□ 0.23
BRCC3-202ENST00000340647 RUVBL2Q9Y230 463 aaKnown RBP16.46■□□□□ 0.23
BRCC3-202ENST00000340647 JRKLQ9Y4A0 524 aa16.46■□□□□ 0.23
BRCC3-202ENST00000340647 NFS1Q9Y697 457 aa16.46■□□□□ 0.23
BRCC3-202ENST00000340647 CDC14CA4D256 554 aa16.45■□□□□ 0.22
BRCC3-202ENST00000340647 DNAJB5O75953 348 aa16.45■□□□□ 0.22
BRCC3-202ENST00000340647 VAPBO95292 243 aa16.45■□□□□ 0.22
BRCC3-202ENST00000340647 KRT14P02533 472 aa16.45■□□□□ 0.22
BRCC3-202ENST00000340647 COILP38432 576 aaPredicted RBP16.45■□□□□ 0.22
BRCC3-202ENST00000340647 MAGEA3P43357 314 aa16.45■□□□□ 0.22
BRCC3-202ENST00000340647 GCGRP47871 477 aa16.45■□□□□ 0.22
BRCC3-202ENST00000340647 TTPAP49638 278 aa16.45■□□□□ 0.22
BRCC3-202ENST00000340647 PLOD1Q02809 727 aaPredicted RBP16.45■□□□□ 0.22
BRCC3-202ENST00000340647 GPS1Q13098 491 aa16.45■□□□□ 0.22
BRCC3-202ENST00000340647 DNAJC21Q5F1R6 531 aaKnown RBP16.45■□□□□ 0.22
BRCC3-202ENST00000340647 ZNF449Q6P9G9 518 aa16.45■□□□□ 0.22
BRCC3-202ENST00000340647 CENPUQ71F23 418 aa16.45■□□□□ 0.22
BRCC3-202ENST00000340647 SLC35F6Q8N357 371 aa16.45■□□□□ 0.22
BRCC3-202ENST00000340647 C19orf47Q8N9M1 422 aaKnown RBP16.45■□□□□ 0.22
BRCC3-202ENST00000340647 ASZ1Q8WWH4 475 aa16.45■□□□□ 0.22
BRCC3-202ENST00000340647 MR1Q95460 341 aa16.45■□□□□ 0.22
BRCC3-202ENST00000340647 GPR87Q9BY21 358 aa16.45■□□□□ 0.22
BRCC3-202ENST00000340647 FAM117AQ9C073 453 aa16.45■□□□□ 0.22
BRCC3-202ENST00000340647 SYTL2Q9HCH5 934 aa16.45■□□□□ 0.22
BRCC3-202ENST00000340647 HOMER3Q9NSC5 361 aa16.45■□□□□ 0.22
BRCC3-202ENST00000340647 FARSAQ9Y285 508 aaKnown RBP16.45■□□□□ 0.22
BRCC3-202ENST00000340647 KLHL20Q9Y2M5 609 aa16.45■□□□□ 0.22
BRCC3-202ENST00000340647 MED16Q9Y2X0 877 aa16.45■□□□□ 0.22
BRCC3-202ENST00000340647 NUP210LQ5VU65 1888 aa16.45■□□□□ 0.22
BRCC3-202ENST00000340647 NBASA2RRP1 2371 aa16.44■□□□□ 0.22
BRCC3-202ENST00000340647 A0A0J9YY10 115 aa16.44■□□□□ 0.22
BRCC3-202ENST00000340647 ZNF749O43361 778 aa16.44■□□□□ 0.22
BRCC3-202ENST00000340647 UGT8Q16880 541 aa16.44■□□□□ 0.22
BRCC3-202ENST00000340647 PTCHD3Q3KNS1 767 aa16.44■□□□□ 0.22
BRCC3-202ENST00000340647 SYTL3Q4VX76 610 aa16.44■□□□□ 0.22
BRCC3-202ENST00000340647 COLEC12Q5KU26 742 aa16.44■□□□□ 0.22
BRCC3-202ENST00000340647 CPZQ66K79 652 aa16.44■□□□□ 0.22
BRCC3-202ENST00000340647 C2orf73Q8N5S3 287 aaPredicted RBP16.44■□□□□ 0.22
BRCC3-202ENST00000340647 DENND1AQ8TEH3 1009 aa16.44■□□□□ 0.22
BRCC3-202ENST00000340647 MAGOHBQ96A72 148 aaKnown RBP16.44■□□□□ 0.22
BRCC3-202ENST00000340647 PBKQ96KB5 322 aa16.44■□□□□ 0.22
BRCC3-202ENST00000340647 ACTR5Q9H9F9 607 aaPredicted RBP16.44■□□□□ 0.22
BRCC3-202ENST00000340647 TLK1Q9UKI8 766 aa16.44■□□□□ 0.22
BRCC3-202ENST00000340647 POLHQ9Y253 713 aa16.44■□□□□ 0.22
BRCC3-202ENST00000340647 ZCWPW2A0A1B0GU75 182 aa16.43■□□□□ 0.22
BRCC3-202ENST00000340647 ZNF185O15231 689 aa16.43■□□□□ 0.22
BRCC3-202ENST00000340647 CNOT3O75175 753 aaKnown RBP16.43■□□□□ 0.22
BRCC3-202ENST00000340647 NIPSNAP2O75323 286 aa16.43■□□□□ 0.22
BRCC3-202ENST00000340647 RAB40ALP0C0E4 278 aa16.43■□□□□ 0.22
BRCC3-202ENST00000340647 CBSLP0DN79 551 aa16.43■□□□□ 0.22
BRCC3-202ENST00000340647 CBSP35520 551 aa16.43■□□□□ 0.22
BRCC3-202ENST00000340647 RAB28P51157 221 aa16.43■□□□□ 0.22
BRCC3-202ENST00000340647 PMS2P54278 862 aa16.43■□□□□ 0.22
BRCC3-202ENST00000340647 FOXL2P58012 376 aa16.43■□□□□ 0.22
BRCC3-202ENST00000340647 YBX1P67809 324 aaKnown RBP16.43■□□□□ 0.22
BRCC3-202ENST00000340647 SRSF1Q07955 248 aaKnown RBP eCLIP16.43■□□□□ 0.22
BRCC3-202ENST00000340647 SLC5A12Q1EHB4 618 aa16.43■□□□□ 0.22
BRCC3-202ENST00000340647 AARS2Q5JTZ9 985 aaKnown RBP16.43■□□□□ 0.22
BRCC3-202ENST00000340647 FCRL6Q6DN72 434 aa16.43■□□□□ 0.22
BRCC3-202ENST00000340647 KIAA0930Q6ICG6 404 aaPredicted RBP16.43■□□□□ 0.22
BRCC3-202ENST00000340647 UNC5DQ6UXZ4 953 aa16.43■□□□□ 0.22
BRCC3-202ENST00000340647 APLFQ8IW19 511 aaPredicted RBP16.43■□□□□ 0.22
BRCC3-202ENST00000340647 SYTL1Q8IYJ3 562 aa16.43■□□□□ 0.22
BRCC3-202ENST00000340647 ENDOVQ8N8Q3 282 aaKnown RBP16.43■□□□□ 0.22
BRCC3-202ENST00000340647 CFAP61Q8NHU2 1237 aa16.43■□□□□ 0.22
BRCC3-202ENST00000340647 C9orf43Q8TAL5 461 aaPredicted RBP16.43■□□□□ 0.22
BRCC3-202ENST00000340647 TTC1Q99614 292 aa16.43■□□□□ 0.22
BRCC3-202ENST00000340647 SLC30A3Q99726 388 aa16.43■□□□□ 0.22
BRCC3-202ENST00000340647 GRPEL1Q9HAV7 217 aa16.43■□□□□ 0.22
BRCC3-202ENST00000340647 ANAPC5Q9UJX4 755 aa16.43■□□□□ 0.22
BRCC3-202ENST00000340647 TP53TG5Q9Y2B4 290 aa16.43■□□□□ 0.22
BRCC3-202ENST00000340647 DOCK10Q96BY6 2186 aa16.43■□□□□ 0.22
BRCC3-202ENST00000340647 A0A1W2PPV9 198 aa16.42■□□□□ 0.22
BRCC3-202ENST00000340647 NRP2O60462 931 aa16.42■□□□□ 0.22
BRCC3-202ENST00000340647 KLF7O75840 302 aaPredicted RBP16.42■□□□□ 0.22
BRCC3-202ENST00000340647 C1orf105O95561 183 aa16.42■□□□□ 0.22
BRCC3-202ENST00000340647 S1PR4O95977 384 aa16.42■□□□□ 0.22
BRCC3-202ENST00000340647 ITGAXP20702 1163 aa16.42■□□□□ 0.22
BRCC3-202ENST00000340647 MAGP20916 626 aa16.42■□□□□ 0.22
BRCC3-202ENST00000340647 CD9P21926 228 aa16.42■□□□□ 0.22
BRCC3-202ENST00000340647 FMO4P31512 558 aa16.42■□□□□ 0.22
BRCC3-202ENST00000340647 EIF3BP55884 814 aaKnown RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms