RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 COL26A1Q96A83 441 aa14.91□□□□□ -0.02
VAPA-201ENST00000340541 FAM136AQ96C01 138 aa14.91□□□□□ -0.02
VAPA-201ENST00000340541 OR6C1Q96RD1 312 aa14.91□□□□□ -0.02
VAPA-201ENST00000340541 SLC30A3Q99726 388 aa14.91□□□□□ -0.02
VAPA-201ENST00000340541 ERP44Q9BS26 406 aa14.91□□□□□ -0.02
VAPA-201ENST00000340541 ZPBPQ9BS86 351 aa14.91□□□□□ -0.02
VAPA-201ENST00000340541 FAM167BQ9BTA0 163 aa14.91□□□□□ -0.02
VAPA-201ENST00000340541 PITPNM3Q9BZ71 974 aa14.91□□□□□ -0.02
VAPA-201ENST00000340541 IARS2Q9NSE4 1012 aaKnown RBP14.91□□□□□ -0.02
VAPA-201ENST00000340541 GRHL1Q9NZI5 618 aa14.91□□□□□ -0.02
VAPA-201ENST00000340541 PILRAQ9UKJ1 303 aa14.91□□□□□ -0.02
VAPA-201ENST00000340541 PLAGL1Q9UM63 463 aa14.91□□□□□ -0.02
VAPA-201ENST00000340541 CHMP2BQ9UQN3 213 aa14.91□□□□□ -0.02
VAPA-201ENST00000340541 TDRKHQ9Y2W6 561 aaKnown RBP14.91□□□□□ -0.02
VAPA-201ENST00000340541 BOD1L1Q8NFC6 3051 aa14.9□□□□□ -0.02
VAPA-201ENST00000340541 GSAPA4D1B5 854 aa14.9□□□□□ -0.02
VAPA-201ENST00000340541 E7ESA3 106 aa14.9□□□□□ -0.02
VAPA-201ENST00000340541 HAUS5O94927 633 aa14.9□□□□□ -0.02
VAPA-201ENST00000340541 FAM87AP0C7U9 286 aa14.9□□□□□ -0.02
VAPA-201ENST00000340541 FGF5P12034 268 aa14.9□□□□□ -0.02
VAPA-201ENST00000340541 WT1P19544 449 aaPredicted RBP14.9□□□□□ -0.02
VAPA-201ENST00000340541 GABRB3P28472 473 aa14.9□□□□□ -0.02
VAPA-201ENST00000340541 ATP5DP30049 168 aa14.9□□□□□ -0.02
VAPA-201ENST00000340541 PKLRP30613 574 aa14.9□□□□□ -0.02
VAPA-201ENST00000340541 SHMT2P34897 504 aa14.9□□□□□ -0.02
VAPA-201ENST00000340541 HSD11B2P80365 405 aa14.9□□□□□ -0.02
VAPA-201ENST00000340541 FOXM1Q08050 763 aa14.9□□□□□ -0.02
VAPA-201ENST00000340541 PRKAA1Q13131 559 aa14.9□□□□□ -0.02
VAPA-201ENST00000340541 IL11RAQ14626 422 aa14.9□□□□□ -0.02
VAPA-201ENST00000340541 FASTKD3Q14CZ7 662 aaKnown RBP14.9□□□□□ -0.02
VAPA-201ENST00000340541 KYNUQ16719 465 aa14.9□□□□□ -0.02
VAPA-201ENST00000340541 DUPD1Q68J44 220 aa14.9□□□□□ -0.02
VAPA-201ENST00000340541 CNSTQ6PJW8 725 aa14.9□□□□□ -0.02
VAPA-201ENST00000340541 TIPARPQ7Z3E1 657 aaKnown RBP14.9□□□□□ -0.02
VAPA-201ENST00000340541 DCUN1D3Q8IWE4 304 aa14.9□□□□□ -0.02
VAPA-201ENST00000340541 IL22RA1Q8N6P7 574 aa14.9□□□□□ -0.02
VAPA-201ENST00000340541 C2CD4AQ8NCU7 369 aaPredicted RBP14.9□□□□□ -0.02
VAPA-201ENST00000340541 CFAP61Q8NHU2 1237 aa14.9□□□□□ -0.02
VAPA-201ENST00000340541 CALML6Q8TD86 181 aa14.9□□□□□ -0.02
VAPA-201ENST00000340541 LRRC39Q96DD0 335 aa14.9□□□□□ -0.02
VAPA-201ENST00000340541 CERS2Q96G23 380 aa14.9□□□□□ -0.02
VAPA-201ENST00000340541 CATSPER2Q96P56 530 aa14.9□□□□□ -0.02
VAPA-201ENST00000340541 EFHD1Q9BUP0 239 aa14.9□□□□□ -0.02
VAPA-201ENST00000340541 SLC25A18Q9H1K4 315 aa14.9□□□□□ -0.02
VAPA-201ENST00000340541 C1GALT1Q9NS00 363 aa14.9□□□□□ -0.02
VAPA-201ENST00000340541 SPHK1Q9NYA1 384 aa14.9□□□□□ -0.02
VAPA-201ENST00000340541 ACTR10Q9NZ32 417 aa14.9□□□□□ -0.02
VAPA-201ENST00000340541 OR6C2Q9NZP2 312 aa14.9□□□□□ -0.02
VAPA-201ENST00000340541 TUBD1Q9UJT1 453 aa14.9□□□□□ -0.02
VAPA-201ENST00000340541 CDC23Q9UJX2 597 aa14.9□□□□□ -0.02
VAPA-201ENST00000340541 RUVBL2Q9Y230 463 aaKnown RBP14.9□□□□□ -0.02
VAPA-201ENST00000340541 BTRCQ9Y297 605 aa14.9□□□□□ -0.02
VAPA-201ENST00000340541 TMEM184BQ9Y519 407 aaPredicted RBP14.9□□□□□ -0.02
VAPA-201ENST00000340541 NFS1Q9Y697 457 aa14.9□□□□□ -0.02
VAPA-201ENST00000340541 SLC9B1P1A6NJY1 282 aa14.89□□□□□ -0.03
VAPA-201ENST00000340541 C2orf74A8MZ97 194 aa14.89□□□□□ -0.03
VAPA-201ENST00000340541 TERTO14746 1132 aaKnown RBP14.89□□□□□ -0.03
VAPA-201ENST00000340541 MATN4O95460 622 aa14.89□□□□□ -0.03
VAPA-201ENST00000340541 C1orf105O95561 183 aa14.89□□□□□ -0.03
VAPA-201ENST00000340541 ZBTB11O95625 1053 aaPredicted RBP14.89□□□□□ -0.03
VAPA-201ENST00000340541 DLGAP3O95886 979 aa14.89□□□□□ -0.03
VAPA-201ENST00000340541 CHRM5P08912 532 aaPredicted RBP14.89□□□□□ -0.03
VAPA-201ENST00000340541 EBLN1P0CF75 366 aa14.89□□□□□ -0.03
VAPA-201ENST00000340541 ZNF28P17035 718 aa14.89□□□□□ -0.03
VAPA-201ENST00000340541 CHRM3P20309 590 aa14.89□□□□□ -0.03
VAPA-201ENST00000340541 MAP4P27816 1152 aaKnown RBP14.89□□□□□ -0.03
VAPA-201ENST00000340541 PEBP1P30086 187 aaKnown RBP14.89□□□□□ -0.03
VAPA-201ENST00000340541 ARL4CP56559 192 aa14.89□□□□□ -0.03
VAPA-201ENST00000340541 CCSMST1Q4G0I0 132 aa14.89□□□□□ -0.03
VAPA-201ENST00000340541 ACSBG2Q5FVE4 666 aa14.89□□□□□ -0.03
VAPA-201ENST00000340541 TRMT10BQ6PF06 316 aaKnown RBP14.89□□□□□ -0.03
VAPA-201ENST00000340541 BORAQ6PGQ7 559 aa14.89□□□□□ -0.03
VAPA-201ENST00000340541 MAATS1Q7Z4T9 603 aa14.89□□□□□ -0.03
VAPA-201ENST00000340541 CACNA2D3Q8IZS8 1091 aa14.89□□□□□ -0.03
VAPA-201ENST00000340541 ZBTB2Q8N680 514 aa14.89□□□□□ -0.03
VAPA-201ENST00000340541 LINC01555Q8NAE3 123 aa14.89□□□□□ -0.03
VAPA-201ENST00000340541 SIDT2Q8NBJ9 832 aaKnown RBP14.89□□□□□ -0.03
VAPA-201ENST00000340541 KCNJ9Q92806 393 aa14.89□□□□□ -0.03
VAPA-201ENST00000340541 OR2A14Q96R47 310 aa14.89□□□□□ -0.03
VAPA-201ENST00000340541 DPH5Q9H2P9 285 aa14.89□□□□□ -0.03
VAPA-201ENST00000340541 WHRNQ9P202 907 aa14.89□□□□□ -0.03
VAPA-201ENST00000340541 SLC17A6Q9P2U8 582 aa14.89□□□□□ -0.03
VAPA-201ENST00000340541 ZC3H7BQ9UGR2 993 aaKnown RBP14.89□□□□□ -0.03
VAPA-201ENST00000340541 CIDEBQ9UHD4 219 aa14.89□□□□□ -0.03
VAPA-201ENST00000340541 TLN1Q9Y490 2541 aaKnown RBP14.88□□□□□ -0.03
VAPA-201ENST00000340541 PIPSLA2A3N6 862 aa14.88□□□□□ -0.03
VAPA-201ENST00000340541 KRT87PA6NCN2 255 aa14.88□□□□□ -0.03
VAPA-201ENST00000340541 RAD1O60671 282 aa14.88□□□□□ -0.03
VAPA-201ENST00000340541 STK17BO94768 372 aa14.88□□□□□ -0.03
VAPA-201ENST00000340541 TIAF1O95411 115 aa14.88□□□□□ -0.03
VAPA-201ENST00000340541 SPTBP11277 2137 aa14.88□□□□□ -0.03
VAPA-201ENST00000340541 PVRP15151 417 aa14.88□□□□□ -0.03
VAPA-201ENST00000340541 ST6GAL1P15907 406 aa14.88□□□□□ -0.03
VAPA-201ENST00000340541 UGT2B7P16662 529 aa14.88□□□□□ -0.03
VAPA-201ENST00000340541 CDH3P22223 829 aa14.88□□□□□ -0.03
VAPA-201ENST00000340541 RAB28P51157 221 aa14.88□□□□□ -0.03
VAPA-201ENST00000340541 TIAL1Q01085 375 aaKnown RBP eCLIP14.88□□□□□ -0.032e-8■■■■■ 29.5
VAPA-201ENST00000340541 PDIA2Q13087 525 aaKnown RBP14.88□□□□□ -0.03
VAPA-201ENST00000340541 TUBB3Q13509 450 aa14.88□□□□□ -0.03
VAPA-201ENST00000340541 FRG1Q14331 258 aaKnown RBP14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms