RNA–Protein interactions for RNA: ENST00000340058.5

RET-201, Transcript of ret proto-oncogene, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RET, Length 4,149 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RET-201ENST00000340058 PTERQ96BW5 349 aa14.38□□□□□ -0.11
RET-201ENST00000340058 MTERF3Q96E29 417 aa14.38□□□□□ -0.11
RET-201ENST00000340058 CCDC106Q9BWC9 280 aa14.38□□□□□ -0.11
RET-201ENST00000340058 TMEM245Q9H330 911 aa14.38□□□□□ -0.11
RET-201ENST00000340058 OR10H1Q9Y4A9 318 aa14.38□□□□□ -0.11
RET-201ENST00000340058 FAM234BA2RU67 622 aa14.38□□□□□ -0.11
RET-201ENST00000340058 TSPAN6O43657 245 aa14.38□□□□□ -0.11
RET-201ENST00000340058 PAPSS2O95340 614 aaPredicted RBP14.38□□□□□ -0.11
RET-201ENST00000340058 C8GP07360 202 aa14.38□□□□□ -0.11
RET-201ENST00000340058 ALOX12P18054 663 aa14.38□□□□□ -0.11
RET-201ENST00000340058 C1DQ13901 141 aaKnown RBP14.38□□□□□ -0.11
RET-201ENST00000340058 GPR153Q6NV75 609 aa14.38□□□□□ -0.11
RET-201ENST00000340058 PROSER1Q86XN7 944 aa14.38□□□□□ -0.11
RET-201ENST00000340058 EPHX4Q8IUS5 362 aa14.38□□□□□ -0.11
RET-201ENST00000340058 ZDHHC21Q8IVQ6 265 aa14.38□□□□□ -0.11
RET-201ENST00000340058 FAM81AQ8TBF8 368 aa14.38□□□□□ -0.11
RET-201ENST00000340058 KCNJ9Q92806 393 aa14.38□□□□□ -0.11
RET-201ENST00000340058 IL17FQ96PD4 163 aa14.38□□□□□ -0.11
RET-201ENST00000340058 TRMT61BQ9BVS5 477 aaKnown RBP14.38□□□□□ -0.11
RET-201ENST00000340058 FAM192AQ9GZU8 254 aa14.38□□□□□ -0.11
RET-201ENST00000340058 SLC32A1Q9H598 525 aa14.38□□□□□ -0.11
RET-201ENST00000340058 FAM186AA6NE01 2351 aa14.38□□□□□ -0.11
RET-201ENST00000340058 PCDH7O60245 1069 aa14.38□□□□□ -0.11
RET-201ENST00000340058 ALPPL2P10696 532 aa14.38□□□□□ -0.11
RET-201ENST00000340058 IGFBP5P24593 272 aa14.38□□□□□ -0.11
RET-201ENST00000340058 TLX1P31314 330 aaPredicted RBP14.38□□□□□ -0.11
RET-201ENST00000340058 MED22Q15528 200 aa14.38□□□□□ -0.11
RET-201ENST00000340058 FAM180BQ6P0A1 224 aa14.38□□□□□ -0.11
RET-201ENST00000340058 AGTRAPQ6RW13 159 aa14.38□□□□□ -0.11
RET-201ENST00000340058 RNF44Q7L0R7 432 aa14.38□□□□□ -0.11
RET-201ENST00000340058 ZNF438Q7Z4V0 828 aa14.38□□□□□ -0.11
RET-201ENST00000340058 KRTCAP2Q8N6L1 136 aa14.38□□□□□ -0.11
RET-201ENST00000340058 ARL10Q8N8L6 244 aa14.38□□□□□ -0.11
RET-201ENST00000340058 OR7A2PQ8NGA2 310 aa14.38□□□□□ -0.11
RET-201ENST00000340058 HMGB4Q8WW32 186 aa14.38□□□□□ -0.11
RET-201ENST00000340058 NUS1Q96E22 293 aa14.38□□□□□ -0.11
RET-201ENST00000340058 DUSP26Q9BV47 211 aa14.38□□□□□ -0.11
RET-201ENST00000340058 NUSAP1Q9BXS6 441 aaKnown RBP14.38□□□□□ -0.11
RET-201ENST00000340058 BRINP2Q9C0B6 783 aa14.38□□□□□ -0.11
RET-201ENST00000340058 CARS2Q9HA77 564 aaKnown RBP14.38□□□□□ -0.11
RET-201ENST00000340058 TAC3Q9UHF0 121 aa14.38□□□□□ -0.11
RET-201ENST00000340058 EMCNQ9ULC0 261 aa14.38□□□□□ -0.11
RET-201ENST00000340058 DNAJC15Q9Y5T4 150 aa14.38□□□□□ -0.11
RET-201ENST00000340058 TRIM24O15164 1050 aa14.37□□□□□ -0.11
RET-201ENST00000340058 KRT75O95678 551 aa14.37□□□□□ -0.11
RET-201ENST00000340058 GNRH1P01148 92 aa14.37□□□□□ -0.11
RET-201ENST00000340058 KLK1P06870 262 aa14.37□□□□□ -0.11
RET-201ENST00000340058 FSHRP23945 695 aa14.37□□□□□ -0.11
RET-201ENST00000340058 VARSP26640 1264 aaKnown RBP14.37□□□□□ -0.11
RET-201ENST00000340058 PRDX3P30048 256 aaKnown RBP14.37□□□□□ -0.11
RET-201ENST00000340058 CTSKP43235 329 aa14.37□□□□□ -0.11
RET-201ENST00000340058 ARCN1P48444 511 aaKnown RBP14.37□□□□□ -0.11
RET-201ENST00000340058 CYP27C1Q4G0S4 372 aa14.37□□□□□ -0.11
RET-201ENST00000340058 AHSA2Q719I0 299 aa14.37□□□□□ -0.11
RET-201ENST00000340058 R3HCC1LQ7Z5L2 792 aaKnown RBP14.37□□□□□ -0.11
RET-201ENST00000340058 RTN4RL1Q86UN2 441 aaPredicted RBP14.37□□□□□ -0.11
RET-201ENST00000340058 TMEM145Q8NBT3 493 aa14.37□□□□□ -0.11
RET-201ENST00000340058 PIK3C3Q8NEB9 887 aa14.37□□□□□ -0.11
RET-201ENST00000340058 TMEM174Q8WUU8 243 aa14.37□□□□□ -0.11
RET-201ENST00000340058 ROPN1LQ96C74 230 aa14.37□□□□□ -0.11
RET-201ENST00000340058 PLEKHG4BQ96PX9 1271 aa14.37□□□□□ -0.11
RET-201ENST00000340058 WDR83Q9BRX9 315 aaKnown RBP14.37□□□□□ -0.11
RET-201ENST00000340058 KLHL1Q9NR64 748 aa14.37□□□□□ -0.11
RET-201ENST00000340058 FNIP2Q9P278 1114 aa14.37□□□□□ -0.11
RET-201ENST00000340058 VPS29Q9UBQ0 182 aa14.37□□□□□ -0.11
RET-201ENST00000340058 ATP6V1HQ9UI12 483 aa14.37□□□□□ -0.11
RET-201ENST00000340058 USP54Q70EL1 1684 aa14.37□□□□□ -0.11
RET-201ENST00000340058 PIPSLA2A3N6 862 aa14.37□□□□□ -0.11
RET-201ENST00000340058 LATO43561 262 aa14.37□□□□□ -0.11
RET-201ENST00000340058 PTNP21246 168 aa14.37□□□□□ -0.11
RET-201ENST00000340058 FOXA1P55317 472 aa14.37□□□□□ -0.11
RET-201ENST00000340058 NAA20P61599 178 aa14.37□□□□□ -0.11
RET-201ENST00000340058 PDGFRLQ15198 375 aa14.37□□□□□ -0.11
RET-201ENST00000340058 POMZP3Q6PJE2 187 aa14.37□□□□□ -0.11
RET-201ENST00000340058 CDK20Q8IZL9 346 aa14.37□□□□□ -0.11
RET-201ENST00000340058 TCAIMQ8N3R3 496 aa14.37□□□□□ -0.11
RET-201ENST00000340058 C11orf65Q8NCR3 313 aa14.37□□□□□ -0.11
RET-201ENST00000340058 CLSTN3Q9BQT9 956 aa14.37□□□□□ -0.11
RET-201ENST00000340058 LRRC3Q9BY71 257 aa14.37□□□□□ -0.11
RET-201ENST00000340058 XKR8Q9H6D3 395 aa14.37□□□□□ -0.11
RET-201ENST00000340058 GLOD5A6NK44 160 aa14.37□□□□□ -0.11
RET-201ENST00000340058 VIPP01282 170 aa14.37□□□□□ -0.11
RET-201ENST00000340058 PGRP06401 933 aa14.37□□□□□ -0.11
RET-201ENST00000340058 PAICSP22234 425 aaKnown RBP14.37□□□□□ -0.11
RET-201ENST00000340058 FAM189BP81408 668 aa14.37□□□□□ -0.11
RET-201ENST00000340058 ANXA8L1Q5VT79 327 aa14.37□□□□□ -0.11
RET-201ENST00000340058 GALNT10Q86SR1 603 aa14.37□□□□□ -0.11
RET-201ENST00000340058 LMNTD1Q8N9Z9 388 aa14.37□□□□□ -0.11
RET-201ENST00000340058 INTS7Q9NVH2 962 aaKnown RBP14.37□□□□□ -0.11
RET-201ENST00000340058 MAT2BQ9NZL9 334 aa14.37□□□□□ -0.11
RET-201ENST00000340058 A0A088AWK7 358 aa14.36□□□□□ -0.11
RET-201ENST00000340058 GUCY1B2O75343 617 aa14.36□□□□□ -0.11
RET-201ENST00000340058 GANABQ14697 944 aaKnown RBP14.36□□□□□ -0.11
RET-201ENST00000340058 USP39Q53GS9 565 aaKnown RBP14.36□□□□□ -0.11
RET-201ENST00000340058 ZDHHC20Q5W0Z9 365 aa14.36□□□□□ -0.11
RET-201ENST00000340058 TAF8Q7Z7C8 310 aa14.36□□□□□ -0.11
RET-201ENST00000340058 LINC01465Q8N7H1 131 aa14.36□□□□□ -0.11
RET-201ENST00000340058 SMYD1Q8NB12 490 aa14.36□□□□□ -0.11
RET-201ENST00000340058 JPH3Q8WXH2 748 aaPredicted RBP14.36□□□□□ -0.11
RET-201ENST00000340058 TFGQ92734 400 aaPredicted RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms