RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 BARD1Q99728 777 aaKnown RBP9.46□□□□□ -0.89
PTCHD4-201ENST00000339488 ITPAQ9BY32 194 aa9.46□□□□□ -0.89
PTCHD4-201ENST00000339488 ZNF518BQ9C0D4 1074 aa9.46□□□□□ -0.89
PTCHD4-201ENST00000339488 VAV3Q9UKW4 847 aa9.46□□□□□ -0.89
PTCHD4-201ENST00000339488 LIPT1Q9Y234 373 aa9.46□□□□□ -0.89
PTCHD4-201ENST00000339488 DTX4Q9Y2E6 619 aa9.46□□□□□ -0.89
PTCHD4-201ENST00000339488 SCN7AQ01118 1682 aa9.46□□□□□ -0.89
PTCHD4-201ENST00000339488 PNMA8CA0A1B0GUJ8 204 aa9.46□□□□□ -0.9
PTCHD4-201ENST00000339488 A0A1B0GV90 55 aa9.46□□□□□ -0.9
PTCHD4-201ENST00000339488 SLURP2P0DP57 97 aa9.46□□□□□ -0.9
PTCHD4-201ENST00000339488 HAPLN1P10915 354 aaPredicted RBP9.46□□□□□ -0.9
PTCHD4-201ENST00000339488 CNTFP26441 200 aa9.46□□□□□ -0.9
PTCHD4-201ENST00000339488 PREPP48147 710 aa9.46□□□□□ -0.9
PTCHD4-201ENST00000339488 MAPKAPK2P49137 400 aa9.46□□□□□ -0.9
PTCHD4-201ENST00000339488 CASP6P55212 293 aa9.46□□□□□ -0.9
PTCHD4-201ENST00000339488 WNT7BP56706 349 aa9.46□□□□□ -0.9
PTCHD4-201ENST00000339488 MCCD1P59942 119 aaPredicted RBP9.46□□□□□ -0.9
PTCHD4-201ENST00000339488 PSPHP78330 225 aa9.46□□□□□ -0.9
PTCHD4-201ENST00000339488 CNTN2Q02246 1040 aa9.46□□□□□ -0.9
PTCHD4-201ENST00000339488 MAB21L1Q13394 359 aa9.46□□□□□ -0.9
PTCHD4-201ENST00000339488 VEPH1Q14D04 833 aa9.46□□□□□ -0.9
PTCHD4-201ENST00000339488 TIGD6Q17RP2 521 aa9.46□□□□□ -0.9
PTCHD4-201ENST00000339488 NADSYN1Q6IA69 706 aa9.46□□□□□ -0.9
PTCHD4-201ENST00000339488 SLFN12LQ6IEE8 588 aa9.46□□□□□ -0.9
PTCHD4-201ENST00000339488 FRMPD2BQ6IN97 320 aa9.46□□□□□ -0.9
PTCHD4-201ENST00000339488 PRMT9Q6P2P2 845 aa9.46□□□□□ -0.9
PTCHD4-201ENST00000339488 HDDC2Q7Z4H3 204 aa9.46□□□□□ -0.9
PTCHD4-201ENST00000339488 PAQR7Q86WK9 346 aa9.46□□□□□ -0.9
PTCHD4-201ENST00000339488 LIX1LQ8IVB5 337 aa9.46□□□□□ -0.9
PTCHD4-201ENST00000339488 SLC37A3Q8NCC5 494 aa9.46□□□□□ -0.9
PTCHD4-201ENST00000339488 NUDT8Q8WV74 236 aa9.46□□□□□ -0.9
PTCHD4-201ENST00000339488 TRIM43Q96BQ3 446 aaPredicted RBP9.46□□□□□ -0.9
PTCHD4-201ENST00000339488 CCDC126Q96EE4 140 aa9.46□□□□□ -0.9
PTCHD4-201ENST00000339488 GPR137Q96N19 417 aa9.46□□□□□ -0.9
PTCHD4-201ENST00000339488 PEBP4Q96S96 227 aa9.46□□□□□ -0.9
PTCHD4-201ENST00000339488 MSTO1Q9BUK6 570 aa9.46□□□□□ -0.9
PTCHD4-201ENST00000339488 CINPQ9BW66 212 aaPredicted RBP9.46□□□□□ -0.9
PTCHD4-201ENST00000339488 C1QTNF1Q9BXJ1 281 aa9.46□□□□□ -0.9
PTCHD4-201ENST00000339488 ZC3H12CQ9C0D7 883 aaKnown RBP9.46□□□□□ -0.9
PTCHD4-201ENST00000339488 LHX5Q9H2C1 402 aa9.46□□□□□ -0.9
PTCHD4-201ENST00000339488 ANKHQ9HCJ1 492 aa9.46□□□□□ -0.9
PTCHD4-201ENST00000339488 MIOSQ9NXC5 875 aa9.46□□□□□ -0.9
PTCHD4-201ENST00000339488 MLXQ9UH92 298 aa9.46□□□□□ -0.9
PTCHD4-201ENST00000339488 KLHL21Q9UJP4 597 aa9.46□□□□□ -0.9
PTCHD4-201ENST00000339488 FBXL2Q9UKC9 423 aa9.46□□□□□ -0.9
PTCHD4-201ENST00000339488 ABCG2Q9UNQ0 655 aa9.46□□□□□ -0.9
PTCHD4-201ENST00000339488 PADI2Q9Y2J8 665 aa9.46□□□□□ -0.9
PTCHD4-201ENST00000339488 PLIN4Q96Q06 1357 aa9.46□□□□□ -0.9
PTCHD4-201ENST00000339488 POM121BA6NF01 834 aa9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 SPDYE2BA6NHP3 402 aa9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 H3BM21 787 aa9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 KIAA0513O60268 411 aa9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 PLOD3O60568 738 aa9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 RHOBTB1O94844 696 aa9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 SPDYE6P0CI01 402 aa9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 OGNP20774 298 aaKnown RBP9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 PTPN7P35236 360 aa9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 CSTF1Q05048 431 aaKnown RBP9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 SERTAD2Q14140 314 aa9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 SPDYE2Q495Y8 402 aa9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 CDKL4Q5MAI5 379 aa9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 LDLRAD1Q5T700 205 aa9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 BHLHB9Q6PI77 547 aa9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 ZYG11AQ6WRX3 759 aa9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 SMIM5Q71RC9 77 aa9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 GALNT10Q86SR1 603 aa9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 RDH10Q8IZV5 341 aa9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 RDM1Q8NG50 284 aa9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 BPIFB1Q8TDL5 484 aa9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 GANCQ8TET4 914 aa9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 UPRTQ96BW1 309 aa9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 PABPC5Q96DU9 382 aaKnown RBP9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 AHCYL2Q96HN2 611 aaKnown RBP9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 FCRL3Q96P31 734 aaPredicted RBP9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 WDR77Q9BQA1 342 aaPredicted RBP9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 TRMOQ9BU70 441 aa9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 CCDC32Q9BV29 185 aa9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 SMURF1Q9HCE7 757 aa9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 TMEM8AQ9HCN3 771 aa9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 ABCB9Q9NP78 766 aa9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 NIT2Q9NQR4 276 aa9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 CTSFQ9UBX1 484 aa9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 VTI1BQ9UEU0 232 aa9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 ACSL5Q9ULC5 683 aa9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 RUVBL2Q9Y230 463 aaKnown RBP9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 NAV1Q8NEY1 1877 aa9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 A0A1W2PPL8 197 aa9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 hCG_1807616A0A1W2PRN6 198 aa9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 CLDN24A6NM45 220 aa9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 DNASE2O00115 360 aaPredicted RBP9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 GTPBP1O00178 669 aaKnown RBP9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 CBX4O00257 560 aa9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 SNX4O95219 450 aa9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 MIPP30301 263 aa9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 KCNJ5P48544 419 aa9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 CRYZQ08257 329 aaKnown RBP9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 GBX1Q14549 363 aa9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 CCDC85BQ15834 202 aaPredicted RBP9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 ZNF284Q2VY69 593 aa9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 ASPRV1Q53RT3 343 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms