RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 ENOPH1Q9UHY7 261 aa6.16□□□□□ -1.42
PRKDC-202ENST00000338368 CNOT6Q9ULM6 557 aaKnown RBP6.16□□□□□ -1.42
PRKDC-202ENST00000338368 SH3GLB1Q9Y371 365 aa6.16□□□□□ -1.42
PRKDC-202ENST00000338368 ZNFX1Q9P2E3 1918 aaKnown RBP6.16□□□□□ -1.42
PRKDC-202ENST00000338368 FGF4P08620 206 aa6.16□□□□□ -1.42
PRKDC-202ENST00000338368 SPANXN4Q5MJ08 99 aa6.16□□□□□ -1.42
PRKDC-202ENST00000338368 TSPAN33Q86UF1 283 aa6.16□□□□□ -1.42
PRKDC-202ENST00000338368 PIANPQ8IYJ0 282 aa6.16□□□□□ -1.42
PRKDC-202ENST00000338368 ZNF540Q8NDQ6 660 aa6.16□□□□□ -1.42
PRKDC-202ENST00000338368 OR4A15Q8NGL6 344 aa6.16□□□□□ -1.42
PRKDC-202ENST00000338368 SLC2A11Q9BYW1 496 aa6.16□□□□□ -1.42
PRKDC-202ENST00000338368 SNTNA6NMZ2 147 aa6.16□□□□□ -1.42
PRKDC-202ENST00000338368 BCAS2O75934 225 aaPredicted RBP6.16□□□□□ -1.42
PRKDC-202ENST00000338368 PCCBP05166 539 aa6.16□□□□□ -1.42
PRKDC-202ENST00000338368 KCNA5P22460 613 aa6.16□□□□□ -1.42
PRKDC-202ENST00000338368 TLX1P31314 330 aaPredicted RBP6.16□□□□□ -1.42
PRKDC-202ENST00000338368 CCNIQ14094 377 aa6.16□□□□□ -1.42
PRKDC-202ENST00000338368 HTR3DQ70Z44 454 aa6.16□□□□□ -1.42
PRKDC-202ENST00000338368 TFGQ92734 400 aaPredicted RBP6.16□□□□□ -1.42
PRKDC-202ENST00000338368 CCM2Q9BSQ5 444 aa6.16□□□□□ -1.42
PRKDC-202ENST00000338368 ARAP2Q8WZ64 1704 aa6.16□□□□□ -1.42
PRKDC-202ENST00000338368 HMX2A2RU54 273 aa6.15□□□□□ -1.42
PRKDC-202ENST00000338368 GJB3O75712 270 aa6.15□□□□□ -1.42
PRKDC-202ENST00000338368 BCL10O95999 233 aa6.15□□□□□ -1.42
PRKDC-202ENST00000338368 EIF2S1P05198 315 aaKnown RBP6.15□□□□□ -1.42
PRKDC-202ENST00000338368 CDKN1CP49918 316 aaPredicted RBP6.15□□□□□ -1.42
PRKDC-202ENST00000338368 TMEM115Q12893 351 aaPredicted RBP6.15□□□□□ -1.42
PRKDC-202ENST00000338368 TMEM173Q86WV6 379 aaPredicted RBP6.15□□□□□ -1.42
PRKDC-202ENST00000338368 ARL10Q8N8L6 244 aa6.15□□□□□ -1.42
PRKDC-202ENST00000338368 SMIM14Q96QK8 99 aa6.15□□□□□ -1.42
PRKDC-202ENST00000338368 VPS29Q9UBQ0 182 aa6.15□□□□□ -1.42
PRKDC-202ENST00000338368 ABCA3Q99758 1704 aa6.15□□□□□ -1.42
PRKDC-202ENST00000338368 LEFTY1O75610 366 aa6.15□□□□□ -1.42
PRKDC-202ENST00000338368 THRBP10828 461 aa6.15□□□□□ -1.42
PRKDC-202ENST00000338368 CHRM1P11229 460 aaPredicted RBP6.15□□□□□ -1.42
PRKDC-202ENST00000338368 C1QTNF8P60827 252 aa6.15□□□□□ -1.42
PRKDC-202ENST00000338368 DGCR6Q14129 220 aa6.15□□□□□ -1.42
PRKDC-202ENST00000338368 PRR23BQ6ZRT6 265 aa6.15□□□□□ -1.42
PRKDC-202ENST00000338368 GPR26Q8NDV2 337 aa6.15□□□□□ -1.42
PRKDC-202ENST00000338368 LRIG1Q96JA1 1093 aa6.15□□□□□ -1.42
PRKDC-202ENST00000338368 CRISPLD1Q9H336 500 aa6.15□□□□□ -1.42
PRKDC-202ENST00000338368 RERGLQ9H628 205 aa6.15□□□□□ -1.42
PRKDC-202ENST00000338368 RAPGEFL1Q9UHV5 662 aa6.15□□□□□ -1.42
PRKDC-202ENST00000338368 SLC31A1O15431 190 aa6.15□□□□□ -1.42
PRKDC-202ENST00000338368 GDI1P31150 447 aa6.15□□□□□ -1.42
PRKDC-202ENST00000338368 PGFP49763 221 aa6.15□□□□□ -1.42
PRKDC-202ENST00000338368 SRSF11Q05519 484 aaKnown RBP6.15□□□□□ -1.42
PRKDC-202ENST00000338368 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.15□□□□□ -1.42
PRKDC-202ENST00000338368 MERTKQ12866 999 aa6.15□□□□□ -1.42
PRKDC-202ENST00000338368 INAVAQ3KP66 663 aa6.15□□□□□ -1.42
PRKDC-202ENST00000338368 AMZ2Q86W34 360 aa6.15□□□□□ -1.42
PRKDC-202ENST00000338368 CNTN4Q8IWV2 1026 aa6.15□□□□□ -1.42
PRKDC-202ENST00000338368 TRPV3Q8NET8 790 aa6.15□□□□□ -1.42
PRKDC-202ENST00000338368 FBXO27Q8NI29 283 aa6.15□□□□□ -1.42
PRKDC-202ENST00000338368 GLYATL1Q969I3 302 aa6.15□□□□□ -1.42
PRKDC-202ENST00000338368 IFT80Q9P2H3 777 aaPredicted RBP6.15□□□□□ -1.42
PRKDC-202ENST00000338368 IKZF3Q9UKT9 509 aa6.15□□□□□ -1.42
PRKDC-202ENST00000338368 OR1F1O43749 312 aa6.15□□□□□ -1.42
PRKDC-202ENST00000338368 AP2A2O94973 939 aa6.15□□□□□ -1.42
PRKDC-202ENST00000338368 SERPINA1P01009 418 aa6.15□□□□□ -1.42
PRKDC-202ENST00000338368 PGRP06401 933 aa6.15□□□□□ -1.42
PRKDC-202ENST00000338368 PDGFRLQ15198 375 aa6.15□□□□□ -1.42
PRKDC-202ENST00000338368 THOC6Q86W42 341 aaKnown RBP6.15□□□□□ -1.42
PRKDC-202ENST00000338368 PLEKHG4BQ96PX9 1271 aa6.15□□□□□ -1.42
PRKDC-202ENST00000338368 IL26Q9NPH9 171 aa6.15□□□□□ -1.42
PRKDC-202ENST00000338368 PDP1Q9P0J1 537 aaPredicted RBP6.15□□□□□ -1.42
PRKDC-202ENST00000338368 TEKT2Q9UIF3 430 aa6.15□□□□□ -1.42
PRKDC-202ENST00000338368 KLHL20Q9Y2M5 609 aa6.15□□□□□ -1.42
PRKDC-202ENST00000338368 EI24O14681 340 aa6.15□□□□□ -1.42
PRKDC-202ENST00000338368 FPGTO14772 594 aa6.15□□□□□ -1.42
PRKDC-202ENST00000338368 MMP20O60882 483 aa6.15□□□□□ -1.42
PRKDC-202ENST00000338368 KLKB1P03952 638 aa6.15□□□□□ -1.42
PRKDC-202ENST00000338368 AMD1P17707 334 aa6.15□□□□□ -1.42
PRKDC-202ENST00000338368 EFNA1P20827 205 aaPredicted RBP6.15□□□□□ -1.42
PRKDC-202ENST00000338368 FSHRP23945 695 aa6.15□□□□□ -1.42
PRKDC-202ENST00000338368 SFT2D3Q587I9 215 aa6.15□□□□□ -1.42
PRKDC-202ENST00000338368 C9orf64Q5T6V5 341 aa6.15□□□□□ -1.42
PRKDC-202ENST00000338368 KIAA2013Q8IYS2 634 aa6.15□□□□□ -1.42
PRKDC-202ENST00000338368 MEAF6Q9HAF1 191 aa6.15□□□□□ -1.42
PRKDC-202ENST00000338368 HSFX1Q9UBD0 423 aa6.15□□□□□ -1.42
PRKDC-202ENST00000338368 ZNF229Q9UJW7 825 aa6.15□□□□□ -1.42
PRKDC-202ENST00000338368 ADAMTS6Q9UKP5 1117 aa6.15□□□□□ -1.42
PRKDC-202ENST00000338368 MYO16Q9Y6X6 1858 aa6.15□□□□□ -1.42
PRKDC-202ENST00000338368 ATXN1LP0C7T5 689 aaKnown RBP6.15□□□□□ -1.42
PRKDC-202ENST00000338368 MYCLP1P12525 358 aaPredicted RBP6.15□□□□□ -1.42
PRKDC-202ENST00000338368 ETV3P41162 512 aa6.15□□□□□ -1.42
PRKDC-202ENST00000338368 CDC42P60953 191 aa6.15□□□□□ -1.42
PRKDC-202ENST00000338368 SEMA3AQ14563 771 aa6.15□□□□□ -1.42
PRKDC-202ENST00000338368 PDCD4Q53EL6 469 aaKnown RBP6.15□□□□□ -1.42
PRKDC-202ENST00000338368 BHLHB9Q6PI77 547 aa6.15□□□□□ -1.42
PRKDC-202ENST00000338368 ST13P5Q8NFI4 369 aaPredicted RBP6.15□□□□□ -1.42
PRKDC-202ENST00000338368 OAZ3Q9UMX2 235 aa6.15□□□□□ -1.42
PRKDC-202ENST00000338368 WDR81Q562E7 1941 aa6.15□□□□□ -1.42
PRKDC-202ENST00000338368 EDDM13A0A1B0GTR0 161 aa6.15□□□□□ -1.43
PRKDC-202ENST00000338368 RGS5O15539 181 aa6.15□□□□□ -1.43
PRKDC-202ENST00000338368 SH3BP2P78314 561 aa6.15□□□□□ -1.43
PRKDC-202ENST00000338368 MBTPS1Q14703 1052 aa6.15□□□□□ -1.43
PRKDC-202ENST00000338368 KHDRBS2Q5VWX1 349 aaKnown RBP6.15□□□□□ -1.43
PRKDC-202ENST00000338368 TYW3Q6IPR3 259 aaKnown RBP6.15□□□□□ -1.43
PRKDC-202ENST00000338368 ZDHHC21Q8IVQ6 265 aa6.15□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms