RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 MANBAO00462 879 aa12.27□□□□□ -0.44
LIMK1-201ENST00000336180 SPINT1O43278 529 aa12.27□□□□□ -0.44
LIMK1-201ENST00000336180 STATHP02808 62 aa12.27□□□□□ -0.44
LIMK1-201ENST00000336180 GSK3BP49841 420 aa12.27□□□□□ -0.44
LIMK1-201ENST00000336180 FOLH1Q04609 750 aa12.27□□□□□ -0.44
LIMK1-201ENST00000336180 BRAT1Q6PJG6 821 aa12.27□□□□□ -0.44
LIMK1-201ENST00000336180 ASB9Q96DX5 294 aa12.27□□□□□ -0.44
LIMK1-201ENST00000336180 APIPQ96GX9 242 aa12.27□□□□□ -0.44
LIMK1-201ENST00000336180 ASB16Q96NS5 453 aa12.27□□□□□ -0.44
LIMK1-201ENST00000336180 IKZF5Q9H5V7 419 aa12.27□□□□□ -0.44
LIMK1-201ENST00000336180 COQ10BQ9H8M1 238 aa12.27□□□□□ -0.44
LIMK1-201ENST00000336180 RIMS3Q9UJD0 308 aa12.27□□□□□ -0.44
LIMK1-201ENST00000336180 CNOT6Q9ULM6 557 aaKnown RBP12.27□□□□□ -0.44
LIMK1-201ENST00000336180 A0A0C4DFX4 3053 aa12.27□□□□□ -0.44
LIMK1-201ENST00000336180 E7EQ34 232 aa12.27□□□□□ -0.45
LIMK1-201ENST00000336180 ADSLP30566 484 aaPredicted RBP12.27□□□□□ -0.45
LIMK1-201ENST00000336180 CHIT1Q13231 466 aa12.27□□□□□ -0.45
LIMK1-201ENST00000336180 ADGRE1Q14246 886 aa12.27□□□□□ -0.45
LIMK1-201ENST00000336180 TLR1Q15399 786 aa12.27□□□□□ -0.45
LIMK1-201ENST00000336180 IER5LQ5T953 404 aa12.27□□□□□ -0.45
LIMK1-201ENST00000336180 SULT1C3Q6IMI6 304 aa12.27□□□□□ -0.45
LIMK1-201ENST00000336180 TRMT11Q7Z4G4 463 aaKnown RBP12.27□□□□□ -0.45
LIMK1-201ENST00000336180 CBARPQ8N350 705 aaPredicted RBP12.27□□□□□ -0.45
LIMK1-201ENST00000336180 PNPT1Q8TCS8 783 aaKnown RBP12.27□□□□□ -0.45
LIMK1-201ENST00000336180 ELOVL6Q9H5J4 265 aa12.27□□□□□ -0.45
LIMK1-201ENST00000336180 SLC52A3Q9NQ40 469 aa12.27□□□□□ -0.45
LIMK1-201ENST00000336180 CD300AQ9UGN4 299 aa12.27□□□□□ -0.45
LIMK1-201ENST00000336180 MAFFQ9ULX9 164 aa12.27□□□□□ -0.45
LIMK1-201ENST00000336180 SH2B3Q9UQQ2 575 aa12.27□□□□□ -0.45
LIMK1-201ENST00000336180 LZTS1Q9Y250 596 aa12.27□□□□□ -0.45
LIMK1-201ENST00000336180 TNPO3Q9Y5L0 923 aaKnown RBP12.27□□□□□ -0.45
LIMK1-201ENST00000336180 ZNF197O14709 1029 aa12.26□□□□□ -0.45
LIMK1-201ENST00000336180 CLIC3O95833 236 aa12.26□□□□□ -0.45
LIMK1-201ENST00000336180 ADH1CP00326 375 aa12.26□□□□□ -0.45
LIMK1-201ENST00000336180 PCCBP05166 539 aa12.26□□□□□ -0.45
LIMK1-201ENST00000336180 CYP2A6P11509 494 aaPredicted RBP12.26□□□□□ -0.45
LIMK1-201ENST00000336180 GPR1P46091 355 aa12.26□□□□□ -0.45
LIMK1-201ENST00000336180 C2orf27AQ580R0 203 aa12.26□□□□□ -0.45
LIMK1-201ENST00000336180 SAMD4BQ5PRF9 694 aaKnown RBP12.26□□□□□ -0.45
LIMK1-201ENST00000336180 NANOGP8Q6NSW7 305 aa12.26□□□□□ -0.45
LIMK1-201ENST00000336180 HMBOX1Q6NT76 420 aa12.26□□□□□ -0.45
LIMK1-201ENST00000336180 C10orf111Q8N326 155 aa12.26□□□□□ -0.45
LIMK1-201ENST00000336180 NANOGQ9H9S0 305 aa12.26□□□□□ -0.45
LIMK1-201ENST00000336180 EPS15L1Q9UBC2 864 aa12.26□□□□□ -0.45
LIMK1-201ENST00000336180 SERGEFQ9UGK8 458 aa12.26□□□□□ -0.45
LIMK1-201ENST00000336180 UTS2RQ9UKP6 389 aa12.26□□□□□ -0.45
LIMK1-201ENST00000336180 A0A1W2PP18 115 aa12.26□□□□□ -0.45
LIMK1-201ENST00000336180 ARPC2O15144 300 aa12.26□□□□□ -0.45
LIMK1-201ENST00000336180 SLC22A2O15244 555 aa12.26□□□□□ -0.45
LIMK1-201ENST00000336180 AHCYL1O43865 530 aa12.26□□□□□ -0.45
LIMK1-201ENST00000336180 E2F6O75461 281 aa12.26□□□□□ -0.45
LIMK1-201ENST00000336180 PGM3O95394 542 aa12.26□□□□□ -0.45
LIMK1-201ENST00000336180 SLC16A8O95907 504 aa12.26□□□□□ -0.45
LIMK1-201ENST00000336180 FESP07332 822 aa12.26□□□□□ -0.45
LIMK1-201ENST00000336180 C6P13671 934 aa12.26□□□□□ -0.45
LIMK1-201ENST00000336180 CD22P20273 847 aa12.26□□□□□ -0.45
LIMK1-201ENST00000336180 MAT2AP31153 395 aaKnown RBP12.26□□□□□ -0.45
LIMK1-201ENST00000336180 MMP12P39900 470 aa12.26□□□□□ -0.45
LIMK1-201ENST00000336180 TRPC1P48995 793 aa12.26□□□□□ -0.45
LIMK1-201ENST00000336180 DLX2Q07687 328 aaPredicted RBP12.26□□□□□ -0.45
LIMK1-201ENST00000336180 BLMHQ13867 455 aa12.26□□□□□ -0.45
LIMK1-201ENST00000336180 NFE2L1Q14494 772 aa12.26□□□□□ -0.45
LIMK1-201ENST00000336180 GAB4Q2WGN9 574 aa12.26□□□□□ -0.45
LIMK1-201ENST00000336180 SMUG1Q53HV7 270 aa12.26□□□□□ -0.45
LIMK1-201ENST00000336180 C9orf64Q5T6V5 341 aa12.26□□□□□ -0.45
LIMK1-201ENST00000336180 HENMT1Q5T8I9 393 aaKnown RBP12.26□□□□□ -0.45
LIMK1-201ENST00000336180 PPP2R2DQ66LE6 453 aa12.26□□□□□ -0.45
LIMK1-201ENST00000336180 UBE2Q1Q7Z7E8 422 aa12.26□□□□□ -0.45
LIMK1-201ENST00000336180 ASB11Q8WXH4 323 aa12.26□□□□□ -0.45
LIMK1-201ENST00000336180 GLYATL1Q969I3 302 aa12.26□□□□□ -0.45
LIMK1-201ENST00000336180 PDLIM5Q96HC4 596 aaKnown RBP12.26□□□□□ -0.45
LIMK1-201ENST00000336180 KCTD14Q9BQ13 255 aaPredicted RBP12.26□□□□□ -0.45
LIMK1-201ENST00000336180 THUMPD3Q9BV44 507 aaKnown RBP12.26□□□□□ -0.45
LIMK1-201ENST00000336180 CEP44Q9C0F1 390 aa12.26□□□□□ -0.45
LIMK1-201ENST00000336180 PARVBQ9HBI1 364 aa12.26□□□□□ -0.45
LIMK1-201ENST00000336180 LRTM1Q9HBL6 345 aa12.26□□□□□ -0.45
LIMK1-201ENST00000336180 VAPAQ9P0L0 249 aa12.26□□□□□ -0.45
LIMK1-201ENST00000336180 THEGQ9P2T0 379 aa12.26□□□□□ -0.45
LIMK1-201ENST00000336180 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.26□□□□□ -0.45
LIMK1-201ENST00000336180 MOSPD1Q9UJG1 213 aa12.26□□□□□ -0.45
LIMK1-201ENST00000336180 FBXO9Q9UK97 447 aaPredicted RBP12.26□□□□□ -0.45
LIMK1-201ENST00000336180 IFRD1O00458 451 aaPredicted RBP12.26□□□□□ -0.45
LIMK1-201ENST00000336180 WNT9AO14904 365 aa12.26□□□□□ -0.45
LIMK1-201ENST00000336180 PCDH8O95206 1070 aa12.26□□□□□ -0.45
LIMK1-201ENST00000336180 HOXD11P31277 338 aaPredicted RBP12.26□□□□□ -0.45
LIMK1-201ENST00000336180 RCAN2Q14206 197 aa12.26□□□□□ -0.45
LIMK1-201ENST00000336180 MYBPC3Q14896 1274 aa12.26□□□□□ -0.45
LIMK1-201ENST00000336180 CYP51A1Q16850 503 aa12.26□□□□□ -0.45
LIMK1-201ENST00000336180 XKR6Q5GH73 641 aa12.26□□□□□ -0.45
LIMK1-201ENST00000336180 TBCELQ5QJ74 424 aa12.26□□□□□ -0.45
LIMK1-201ENST00000336180 VITQ6UXI7 678 aa12.26□□□□□ -0.45
LIMK1-201ENST00000336180 CHPFQ8IZ52 775 aa12.26□□□□□ -0.45
LIMK1-201ENST00000336180 GANCQ8TET4 914 aa12.26□□□□□ -0.45
LIMK1-201ENST00000336180 TMEM125Q96AQ2 219 aa12.26□□□□□ -0.45
LIMK1-201ENST00000336180 TMEM159Q96B96 161 aa12.26□□□□□ -0.45
LIMK1-201ENST00000336180 INPP5KQ9BT40 448 aa12.26□□□□□ -0.45
LIMK1-201ENST00000336180 OSBPL6Q9BZF3 934 aa12.26□□□□□ -0.45
LIMK1-201ENST00000336180 HCN2Q9UL51 889 aa12.26□□□□□ -0.45
LIMK1-201ENST00000336180 ALPK3Q96L96 1907 aa12.25□□□□□ -0.45
LIMK1-201ENST00000336180 WDR87Q6ZQQ6 2873 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms