RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 CXCL17Q6UXB2 119 aa23.11■■□□□ 1.29
TSKU-201ENST00000333090 CEP68Q76N32 757 aa23.11■■□□□ 1.29
TSKU-201ENST00000333090 RHOXF1Q8NHV9 184 aa23.11■■□□□ 1.29
TSKU-201ENST00000333090 SLCO3A1Q9UIG8 710 aa23.11■■□□□ 1.29
TSKU-201ENST00000333090 RGS10O43665 173 aa23.1■■□□□ 1.29
TSKU-201ENST00000333090 ZNF682O95780 498 aa23.1■■□□□ 1.29
TSKU-201ENST00000333090 PRLP01236 227 aa23.1■■□□□ 1.29
TSKU-201ENST00000333090 PPP5CP53041 499 aa23.1■■□□□ 1.29
TSKU-201ENST00000333090 CACHD1Q5VU97 1274 aa23.1■■□□□ 1.29
TSKU-201ENST00000333090 SBSNQ6UWP8 590 aa23.1■■□□□ 1.29
TSKU-201ENST00000333090 ZHX1-C8orf76Q96EF9 292 aa23.1■■□□□ 1.29
TSKU-201ENST00000333090 MYOCQ99972 504 aa23.1■■□□□ 1.29
TSKU-201ENST00000333090 ACOT13Q9NPJ3 140 aa23.1■■□□□ 1.29
TSKU-201ENST00000333090 C1orf109Q9NX04 203 aa23.1■■□□□ 1.29
TSKU-201ENST00000333090 ANGPTL3Q9Y5C1 460 aa23.1■■□□□ 1.29
TSKU-201ENST00000333090 HOXD9P28356 352 aaPredicted RBP23.1■■□□□ 1.29
TSKU-201ENST00000333090 MAPKAPK2P49137 400 aa23.1■■□□□ 1.29
TSKU-201ENST00000333090 ALDH7A1P49419 539 aaKnown RBP23.1■■□□□ 1.29
TSKU-201ENST00000333090 MAP2K5Q13163 448 aa23.1■■□□□ 1.29
TSKU-201ENST00000333090 GBX1Q14549 363 aa23.1■■□□□ 1.29
TSKU-201ENST00000333090 ALG1LQ6GMV1 187 aa23.1■■□□□ 1.29
TSKU-201ENST00000333090 SUSD1Q6UWL2 747 aa23.1■■□□□ 1.29
TSKU-201ENST00000333090 MCFD2Q8NI22 146 aa23.1■■□□□ 1.29
TSKU-201ENST00000333090 RASSF1Q9NS23 344 aa23.1■■□□□ 1.29
TSKU-201ENST00000333090 STX7O15400 261 aaKnown RBP23.1■■□□□ 1.29
TSKU-201ENST00000333090 FAM20BO75063 409 aa23.1■■□□□ 1.29
TSKU-201ENST00000333090 CD36P16671 472 aa23.1■■□□□ 1.29
TSKU-201ENST00000333090 DAPP51397 102 aa23.1■■□□□ 1.29
TSKU-201ENST00000333090 CLCN7P51798 805 aa23.1■■□□□ 1.29
TSKU-201ENST00000333090 NADSYN1Q6IA69 706 aa23.1■■□□□ 1.29
TSKU-201ENST00000333090 MRPL10Q7Z7H8 261 aaKnown RBP23.1■■□□□ 1.29
TSKU-201ENST00000333090 ADAMTSL2Q86TH1 951 aa23.1■■□□□ 1.29
TSKU-201ENST00000333090 ANKRD46Q86W74 232 aa23.1■■□□□ 1.29
TSKU-201ENST00000333090 GLB1L3Q8NCI6 653 aaPredicted RBP23.1■■□□□ 1.29
TSKU-201ENST00000333090 CLMPQ9H6B4 373 aa23.1■■□□□ 1.29
TSKU-201ENST00000333090 ABCG2Q9UNQ0 655 aa23.1■■□□□ 1.29
TSKU-201ENST00000333090 INSIG1O15503 277 aa23.09■■□□□ 1.29
TSKU-201ENST00000333090 LCKP06239 509 aa23.09■■□□□ 1.29
TSKU-201ENST00000333090 GNPDA1P46926 289 aa23.09■■□□□ 1.29
TSKU-201ENST00000333090 FCGRTP55899 365 aa23.09■■□□□ 1.29
TSKU-201ENST00000333090 CAPN13Q6MZZ7 669 aaPredicted RBP23.09■■□□□ 1.29
TSKU-201ENST00000333090 TTC9BQ8N6N2 239 aa23.09■■□□□ 1.29
TSKU-201ENST00000333090 FBXO32Q969P5 355 aa23.09■■□□□ 1.29
TSKU-201ENST00000333090 EFHD2Q96C19 240 aaPredicted RBP23.09■■□□□ 1.29
TSKU-201ENST00000333090 SIAEQ9HAT2 523 aa23.09■■□□□ 1.29
TSKU-201ENST00000333090 MOXD2PA6NHM9 499 aa23.09■■□□□ 1.29
TSKU-201ENST00000333090 FAM220BPB1ANY3 271 aa23.09■■□□□ 1.29
TSKU-201ENST00000333090 DIRAS1O95057 198 aa23.09■■□□□ 1.29
TSKU-201ENST00000333090 ZNF24P17028 368 aa23.09■■□□□ 1.29
TSKU-201ENST00000333090 ITGB6P18564 788 aa23.09■■□□□ 1.29
TSKU-201ENST00000333090 EPHA2P29317 976 aa23.09■■□□□ 1.29
TSKU-201ENST00000333090 HOXC8P31273 242 aa23.09■■□□□ 1.29
TSKU-201ENST00000333090 CD52P31358 61 aa23.09■■□□□ 1.29
TSKU-201ENST00000333090 RCVRNP35243 200 aa23.09■■□□□ 1.29
TSKU-201ENST00000333090 EIF2DP41214 584 aaKnown RBP23.09■■□□□ 1.29
TSKU-201ENST00000333090 SEPHS1P49903 392 aa23.09■■□□□ 1.29
TSKU-201ENST00000333090 PURAQ00577 322 aaKnown RBP23.09■■□□□ 1.29
TSKU-201ENST00000333090 MAD2L1Q13257 205 aaPredicted RBP23.09■■□□□ 1.29
TSKU-201ENST00000333090 ATG9BQ674R7 924 aa23.09■■□□□ 1.29
TSKU-201ENST00000333090 SVOPQ8N4V2 548 aa23.09■■□□□ 1.29
TSKU-201ENST00000333090 PSKH2Q96QS6 385 aa23.09■■□□□ 1.29
TSKU-201ENST00000333090 APOL5Q9BWW9 433 aa23.09■■□□□ 1.29
TSKU-201ENST00000333090 EFCAB9A8MZ26 197 aa23.08■■□□□ 1.29
TSKU-201ENST00000333090 H0Y626 953 aa23.08■■□□□ 1.29
TSKU-201ENST00000333090 PER2O15055 1255 aa23.08■■□□□ 1.29
TSKU-201ENST00000333090 ULK1O75385 1050 aa23.08■■□□□ 1.29
TSKU-201ENST00000333090 TRIM16O95361 564 aa23.08■■□□□ 1.29
TSKU-201ENST00000333090 GJA8P48165 433 aa23.08■■□□□ 1.29
TSKU-201ENST00000333090 MORN1Q5T089 497 aa23.08■■□□□ 1.29
TSKU-201ENST00000333090 EGFL8Q99944 293 aa23.08■■□□□ 1.29
TSKU-201ENST00000333090 LRTM1Q9HBL6 345 aa23.08■■□□□ 1.29
TSKU-201ENST00000333090 ZNF490Q9ULM2 529 aaPredicted RBP23.08■■□□□ 1.29
TSKU-201ENST00000333090 ERVK-11Q9UQG0 969 aa23.08■■□□□ 1.29
TSKU-201ENST00000333090 AREL1O15033 823 aa23.08■■□□□ 1.28
TSKU-201ENST00000333090 RAD51BO15315 384 aa23.08■■□□□ 1.28
TSKU-201ENST00000333090 B3GALT4O96024 378 aa23.08■■□□□ 1.28
TSKU-201ENST00000333090 ESR1P03372 595 aa23.08■■□□□ 1.28
TSKU-201ENST00000333090 TYMPP19971 482 aa23.08■■□□□ 1.28
TSKU-201ENST00000333090 CLCN4P51793 760 aa23.08■■□□□ 1.28
TSKU-201ENST00000333090 ARHGDIAP52565 204 aa23.08■■□□□ 1.28
TSKU-201ENST00000333090 UBE2FQ969M7 185 aa23.08■■□□□ 1.28
TSKU-201ENST00000333090 APOL4Q9BPW4 351 aa23.08■■□□□ 1.28
TSKU-201ENST00000333090 MTPAPQ9NVV4 582 aaKnown RBP eCLIP23.08■■□□□ 1.28
TSKU-201ENST00000333090 ELOVL2Q9NXB9 296 aa23.08■■□□□ 1.28
TSKU-201ENST00000333090 UBA2Q9UBT2 640 aaPredicted RBP23.08■■□□□ 1.28
TSKU-201ENST00000333090 TRBV5-3A0A0A0MS03 114 aa23.07■■□□□ 1.28
TSKU-201ENST00000333090 TACR2P21452 398 aa23.07■■□□□ 1.28
TSKU-201ENST00000333090 CD9P21926 228 aa23.07■■□□□ 1.28
TSKU-201ENST00000333090 PHC1P78364 1004 aa23.07■■□□□ 1.28
TSKU-201ENST00000333090 KEAP1Q14145 624 aa23.07■■□□□ 1.28
TSKU-201ENST00000333090 NEK10Q6ZWH5 1172 aa23.07■■□□□ 1.28
TSKU-201ENST00000333090 AHSA2Q719I0 299 aa23.07■■□□□ 1.28
TSKU-201ENST00000333090 RGL4Q8IZJ4 473 aa23.07■■□□□ 1.28
TSKU-201ENST00000333090 TTC29Q8NA56 475 aaPredicted RBP23.07■■□□□ 1.28
TSKU-201ENST00000333090 PYCR2Q96C36 320 aa23.07■■□□□ 1.28
TSKU-201ENST00000333090 MTFMTQ96DP5 389 aaKnown RBP23.07■■□□□ 1.28
TSKU-201ENST00000333090 TBX1O43435 398 aa23.07■■□□□ 1.28
TSKU-201ENST00000333090 UPK1BO75841 260 aa23.07■■□□□ 1.28
TSKU-201ENST00000333090 NTRK1P04629 796 aa23.07■■□□□ 1.28
TSKU-201ENST00000333090 PTGER3P43115 390 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms