RNA–Protein interactions for RNA: ENST00000331239.8

C11orf54-201, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-201ENST00000331239 RUVBL2Q9Y230 463 aaKnown RBP9.27□□□□□ -0.93
C11orf54-201ENST00000331239 CDYLQ9Y232 598 aa9.27□□□□□ -0.93
C11orf54-201ENST00000331239 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.27□□□□□ -0.93
C11orf54-201ENST00000331239 TMEM202A6NGA9 273 aa9.27□□□□□ -0.93
C11orf54-201ENST00000331239 ZNF839A8K0R7 811 aa9.27□□□□□ -0.93
C11orf54-201ENST00000331239 TMEM114B3SHH9 223 aa9.27□□□□□ -0.93
C11orf54-201ENST00000331239 GPR39O43194 453 aa9.27□□□□□ -0.93
C11orf54-201ENST00000331239 KLK8O60259 260 aa9.27□□□□□ -0.93
C11orf54-201ENST00000331239 LRP3O75074 770 aa9.27□□□□□ -0.93
C11orf54-201ENST00000331239 PSIP1O75475 530 aaKnown RBP9.27□□□□□ -0.93
C11orf54-201ENST00000331239 SKAP2O75563 359 aaPredicted RBP9.27□□□□□ -0.93
C11orf54-201ENST00000331239 SLC34A2O95436 690 aa9.27□□□□□ -0.93
C11orf54-201ENST00000331239 HSPA4LO95757 839 aa9.27□□□□□ -0.93
C11orf54-201ENST00000331239 ANPEPP15144 967 aa9.27□□□□□ -0.93
C11orf54-201ENST00000331239 ABCG1P45844 678 aa9.27□□□□□ -0.93
C11orf54-201ENST00000331239 HNMTP50135 292 aa9.27□□□□□ -0.93
C11orf54-201ENST00000331239 CLDN2P57739 230 aa9.27□□□□□ -0.93
C11orf54-201ENST00000331239 DNAJB13P59910 316 aa9.27□□□□□ -0.93
C11orf54-201ENST00000331239 ILF3Q12906 894 aaKnown RBP eCLIP9.27□□□□□ -0.93
C11orf54-201ENST00000331239 EIF2B5Q13144 721 aaKnown RBP9.27□□□□□ -0.93
C11orf54-201ENST00000331239 SIM2Q14190 667 aaPredicted RBP9.27□□□□□ -0.93
C11orf54-201ENST00000331239 ALG11Q2TAA5 492 aa9.27□□□□□ -0.93
C11orf54-201ENST00000331239 CFAP157Q5JU67 520 aa9.27□□□□□ -0.93
C11orf54-201ENST00000331239 LAIR1Q6GTX8 287 aa9.27□□□□□ -0.93
C11orf54-201ENST00000331239 SLC23A3Q6PIS1 610 aa9.27□□□□□ -0.93
C11orf54-201ENST00000331239 TSSK4Q6SA08 328 aa9.27□□□□□ -0.93
C11orf54-201ENST00000331239 PDZD3Q86UT5 571 aa9.27□□□□□ -0.93
C11orf54-201ENST00000331239 GKN2Q86XP6 184 aa9.27□□□□□ -0.93
C11orf54-201ENST00000331239 KLHDC8AQ8IYD2 350 aa9.27□□□□□ -0.93
C11orf54-201ENST00000331239 TMEFF1Q8IYR6 380 aa9.27□□□□□ -0.93
C11orf54-201ENST00000331239 SIDT2Q8NBJ9 832 aaKnown RBP9.27□□□□□ -0.93
C11orf54-201ENST00000331239 ATL1Q8WXF7 558 aa9.27□□□□□ -0.93
C11orf54-201ENST00000331239 OR1E3Q8WZA6 343 aa9.27□□□□□ -0.93
C11orf54-201ENST00000331239 CMTM5Q96DZ9 223 aa9.27□□□□□ -0.93
C11orf54-201ENST00000331239 OR52A5Q9H2C5 316 aa9.27□□□□□ -0.93
C11orf54-201ENST00000331239 UCK1Q9HA47 277 aa9.27□□□□□ -0.93
C11orf54-201ENST00000331239 FGF22Q9HCT0 170 aa9.27□□□□□ -0.93
C11orf54-201ENST00000331239 NUDT4Q9NZJ9 180 aa9.27□□□□□ -0.93
C11orf54-201ENST00000331239 RAB23Q9ULC3 237 aa9.27□□□□□ -0.93
C11orf54-201ENST00000331239 TMEM98Q9Y2Y6 226 aa9.27□□□□□ -0.93
C11orf54-201ENST00000331239 ZFC3H1O60293 1989 aaKnown RBP9.26□□□□□ -0.93
C11orf54-201ENST00000331239 A0A088AWK7 358 aa9.26□□□□□ -0.93
C11orf54-201ENST00000331239 KIR2DS5A0A0G2JLQ3 304 aa9.26□□□□□ -0.93
C11orf54-201ENST00000331239 A0A0G2JNG1 304 aa9.26□□□□□ -0.93
C11orf54-201ENST00000331239 OR2AG2A6NM03 316 aa9.26□□□□□ -0.93
C11orf54-201ENST00000331239 KIR2DS3K7RE56 304 aa9.26□□□□□ -0.93
C11orf54-201ENST00000331239 IFRD1O00458 451 aaPredicted RBP9.26□□□□□ -0.93
C11orf54-201ENST00000331239 CCNT2O60583 730 aaKnown RBP9.26□□□□□ -0.93
C11orf54-201ENST00000331239 FKBP6O75344 327 aa9.26□□□□□ -0.93
C11orf54-201ENST00000331239 SYPP08247 313 aa9.26□□□□□ -0.93
C11orf54-201ENST00000331239 F7P08709 466 aaPredicted RBP9.26□□□□□ -0.93
C11orf54-201ENST00000331239 ZNF883P0CG24 379 aa9.26□□□□□ -0.93
C11orf54-201ENST00000331239 CYP2A7P20853 494 aa9.26□□□□□ -0.93
C11orf54-201ENST00000331239 ACADLP28330 430 aa9.26□□□□□ -0.93
C11orf54-201ENST00000331239 CTSKP43235 329 aa9.26□□□□□ -0.93
C11orf54-201ENST00000331239 SLC25A3Q00325 362 aa9.26□□□□□ -0.93
C11orf54-201ENST00000331239 IRF9Q00978 393 aa9.26□□□□□ -0.93
C11orf54-201ENST00000331239 KIR2DS5Q14953 304 aa9.26□□□□□ -0.93
C11orf54-201ENST00000331239 ARHGAP19Q14CB8 494 aa9.26□□□□□ -0.93
C11orf54-201ENST00000331239 UAP1L1Q3KQV9 507 aa9.26□□□□□ -0.93
C11orf54-201ENST00000331239 VWA5B1Q5TIE3 1220 aa9.26□□□□□ -0.93
C11orf54-201ENST00000331239 TMEM207Q6UWW9 146 aa9.26□□□□□ -0.93
C11orf54-201ENST00000331239 ISCA2Q86U28 154 aa9.26□□□□□ -0.93
C11orf54-201ENST00000331239 KBTBD2Q8IY47 623 aa9.26□□□□□ -0.93
C11orf54-201ENST00000331239 SLC22A18ASQ8N1D0 253 aa9.26□□□□□ -0.93
C11orf54-201ENST00000331239 FRMD1Q8N878 549 aa9.26□□□□□ -0.93
C11orf54-201ENST00000331239 ACVR1CQ8NER5 493 aa9.26□□□□□ -0.93
C11orf54-201ENST00000331239 MCOLN3Q8TDD5 553 aa9.26□□□□□ -0.93
C11orf54-201ENST00000331239 LINGO1Q96FE5 620 aa9.26□□□□□ -0.93
C11orf54-201ENST00000331239 RAB11FIP5Q9BXF6 653 aa9.26□□□□□ -0.93
C11orf54-201ENST00000331239 CAB39LQ9H9S4 337 aa9.26□□□□□ -0.93
C11orf54-201ENST00000331239 CARS2Q9HA77 564 aaKnown RBP9.26□□□□□ -0.93
C11orf54-201ENST00000331239 PARVBQ9HBI1 364 aa9.26□□□□□ -0.93
C11orf54-201ENST00000331239 FZD3Q9NPG1 666 aa9.26□□□□□ -0.93
C11orf54-201ENST00000331239 SLC6A14Q9UN76 642 aa9.26□□□□□ -0.93
C11orf54-201ENST00000331239 OARD1Q9Y530 152 aa9.26□□□□□ -0.93
C11orf54-201ENST00000331239 TNPO3Q9Y5L0 923 aaKnown RBP9.26□□□□□ -0.93
C11orf54-201ENST00000331239 TARM1B6A8C7 271 aa9.26□□□□□ -0.93
C11orf54-201ENST00000331239 G3V2L1 256 aa9.26□□□□□ -0.93
C11orf54-201ENST00000331239 STX16-NPEPL1H3BU86 382 aa9.26□□□□□ -0.93
C11orf54-201ENST00000331239 STX16O14662 325 aa9.26□□□□□ -0.93
C11orf54-201ENST00000331239 PHGDHO43175 533 aaKnown RBP9.26□□□□□ -0.93
C11orf54-201ENST00000331239 ZBTB14O43829 449 aa9.26□□□□□ -0.93
C11orf54-201ENST00000331239 IPO13O94829 963 aaKnown RBP9.26□□□□□ -0.93
C11orf54-201ENST00000331239 CATP04040 527 aaKnown RBP9.26□□□□□ -0.93
C11orf54-201ENST00000331239 DHPSP49366 369 aaPredicted RBP9.26□□□□□ -0.93
C11orf54-201ENST00000331239 ARRB1P49407 418 aaPredicted RBP9.26□□□□□ -0.93
C11orf54-201ENST00000331239 TECRLQ5HYJ1 363 aa9.26□□□□□ -0.93
C11orf54-201ENST00000331239 APLFQ8IW19 511 aaPredicted RBP9.26□□□□□ -0.93
C11orf54-201ENST00000331239 CFAP206Q8IYR0 622 aa9.26□□□□□ -0.93
C11orf54-201ENST00000331239 TBC1D21Q8IYX1 336 aa9.26□□□□□ -0.93
C11orf54-201ENST00000331239 PHACTR4Q8IZ21 702 aa9.26□□□□□ -0.93
C11orf54-201ENST00000331239 ZNF781Q8N8C0 355 aa9.26□□□□□ -0.93
C11orf54-201ENST00000331239 UBTD2Q8WUN7 234 aa9.26□□□□□ -0.93
C11orf54-201ENST00000331239 EEF1AKMT1Q8WVE0 214 aa9.26□□□□□ -0.93
C11orf54-201ENST00000331239 C1QTNF3Q9BXJ4 246 aa9.26□□□□□ -0.93
C11orf54-201ENST00000331239 CYP4F12Q9HCS2 524 aa9.26□□□□□ -0.93
C11orf54-201ENST00000331239 NCKIPSDQ9NZQ3 722 aa9.26□□□□□ -0.93
C11orf54-201ENST00000331239 SPATA7Q9P0W8 599 aa9.26□□□□□ -0.93
C11orf54-201ENST00000331239 PCDHGB2Q9Y5G2 931 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms