RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 RGS14O43566 566 aa16.51■□□□□ 0.23
DDX41-201ENST00000330503 VEGFDO43915 354 aa16.51■□□□□ 0.23
DDX41-201ENST00000330503 POP7O75817 140 aaKnown RBP16.51■□□□□ 0.23
DDX41-201ENST00000330503 ADH1BP00325 375 aa16.51■□□□□ 0.23
DDX41-201ENST00000330503 SLC2A4P14672 509 aa16.51■□□□□ 0.23
DDX41-201ENST00000330503 C5AR1P21730 350 aa16.51■□□□□ 0.23
DDX41-201ENST00000330503 POLR2JP52435 117 aaKnown RBP16.51■□□□□ 0.23
DDX41-201ENST00000330503 YBX1P67809 324 aaKnown RBP16.51■□□□□ 0.23
DDX41-201ENST00000330503 AAK1Q2M2I8 961 aa16.51■□□□□ 0.23
DDX41-201ENST00000330503 GGTA1PQ4G0N0 100 aa16.51■□□□□ 0.23
DDX41-201ENST00000330503 C11orf96Q7Z7L8 435 aa16.51■□□□□ 0.23
DDX41-201ENST00000330503 IL1RL2Q9HB29 575 aa16.51■□□□□ 0.23
DDX41-201ENST00000330503 TMEM45AQ9NWC5 275 aa16.51■□□□□ 0.23
DDX41-201ENST00000330503 LMCD1Q9NZU5 365 aa16.51■□□□□ 0.23
DDX41-201ENST00000330503 STOX2Q9P2F5 926 aaPredicted RBP16.51■□□□□ 0.23
DDX41-201ENST00000330503 ANGPTL2Q9UKU9 493 aa16.51■□□□□ 0.23
DDX41-201ENST00000330503 GPR34Q9UPC5 381 aa16.51■□□□□ 0.23
DDX41-201ENST00000330503 SPTBN5Q9NRC6 3674 aaKnown RBP16.51■□□□□ 0.23
DDX41-201ENST00000330503 XIRP2A4UGR9 3374 aa16.51■□□□□ 0.23
DDX41-201ENST00000330503 FAM234BA2RU67 622 aa16.51■□□□□ 0.23
DDX41-201ENST00000330503 PRORSD1PA6NEY8 169 aa16.51■□□□□ 0.23
DDX41-201ENST00000330503 H3BM21 787 aa16.51■□□□□ 0.23
DDX41-201ENST00000330503 ANGPT2O15123 496 aa16.51■□□□□ 0.23
DDX41-201ENST00000330503 MAP3K7O43318 606 aa16.51■□□□□ 0.23
DDX41-201ENST00000330503 RNASEH1O60930 286 aaKnown RBP16.51■□□□□ 0.23
DDX41-201ENST00000330503 BCAS2O75934 225 aaPredicted RBP16.51■□□□□ 0.23
DDX41-201ENST00000330503 PCDH8O95206 1070 aa16.51■□□□□ 0.23
DDX41-201ENST00000330503 PDYNP01213 254 aa16.51■□□□□ 0.23
DDX41-201ENST00000330503 CATP04040 527 aaKnown RBP16.51■□□□□ 0.23
DDX41-201ENST00000330503 TLR1Q15399 786 aa16.51■□□□□ 0.23
DDX41-201ENST00000330503 COQ5Q5HYK3 327 aa16.51■□□□□ 0.23
DDX41-201ENST00000330503 AGTRAPQ6RW13 159 aa16.51■□□□□ 0.23
DDX41-201ENST00000330503 CYP20A1Q6UW02 462 aa16.51■□□□□ 0.23
DDX41-201ENST00000330503 LRRC74BQ6ZQY2 392 aa16.51■□□□□ 0.23
DDX41-201ENST00000330503 KLHDC8AQ8IYD2 350 aa16.51■□□□□ 0.23
DDX41-201ENST00000330503 CSGALNACT1Q8TDX6 532 aa16.51■□□□□ 0.23
DDX41-201ENST00000330503 ZNF514Q96K75 400 aaPredicted RBP16.51■□□□□ 0.23
DDX41-201ENST00000330503 ATG2BQ96BY7 2078 aa16.51■□□□□ 0.23
DDX41-201ENST00000330503 C17orf113A0A1B0GUU1 675 aa16.5■□□□□ 0.23
DDX41-201ENST00000330503 A0A1W2PP55 124 aa16.5■□□□□ 0.23
DDX41-201ENST00000330503 H3BNX3 289 aa16.5■□□□□ 0.23
DDX41-201ENST00000330503 FXYD1O00168 92 aa16.5■□□□□ 0.23
DDX41-201ENST00000330503 RSL1D1O76021 490 aaKnown RBP16.5■□□□□ 0.23
DDX41-201ENST00000330503 C1orf105O95561 183 aa16.5■□□□□ 0.23
DDX41-201ENST00000330503 BAG2O95816 211 aa16.5■□□□□ 0.23
DDX41-201ENST00000330503 KRT6AP02538 564 aa16.5■□□□□ 0.23
DDX41-201ENST00000330503 KRT6BP04259 564 aa16.5■□□□□ 0.23
DDX41-201ENST00000330503 TCN1P20061 433 aaPredicted RBP16.5■□□□□ 0.23
DDX41-201ENST00000330503 VHLP40337 213 aa16.5■□□□□ 0.23
DDX41-201ENST00000330503 KRT6CP48668 564 aa16.5■□□□□ 0.23
DDX41-201ENST00000330503 KCNK10P57789 538 aa16.5■□□□□ 0.23
DDX41-201ENST00000330503 SMU1Q2TAY7 513 aa16.5■□□□□ 0.23
DDX41-201ENST00000330503 PAGE3Q5JUK9 113 aa16.5■□□□□ 0.23
DDX41-201ENST00000330503 SWT1Q5T5J6 900 aaKnown RBP16.5■□□□□ 0.23
DDX41-201ENST00000330503 CRTC3Q6UUV7 619 aa16.5■□□□□ 0.23
DDX41-201ENST00000330503 THOC6Q86W42 341 aaKnown RBP16.5■□□□□ 0.23
DDX41-201ENST00000330503 LGR4Q9BXB1 951 aa16.5■□□□□ 0.23
DDX41-201ENST00000330503 SPAG4Q9NPE6 437 aa16.5■□□□□ 0.23
DDX41-201ENST00000330503 MBNL1Q9NR56 388 aaKnown RBP16.5■□□□□ 0.23
DDX41-201ENST00000330503 GMPR2Q9P2T1 348 aaKnown RBP16.5■□□□□ 0.23
DDX41-201ENST00000330503 ZFR2Q9UPR6 939 aaKnown RBP16.5■□□□□ 0.23
DDX41-201ENST00000330503 POLR3HQ9Y535 204 aaPredicted RBP16.5■□□□□ 0.23
DDX41-201ENST00000330503 MTCH2Q9Y6C9 303 aa16.5■□□□□ 0.23
DDX41-201ENST00000330503 EEDO75530 441 aaKnown RBP16.49■□□□□ 0.23
DDX41-201ENST00000330503 PCCBP05166 539 aa16.49■□□□□ 0.23
DDX41-201ENST00000330503 GNPDA1P46926 289 aa16.49■□□□□ 0.23
DDX41-201ENST00000330503 NEK2P51955 445 aa16.49■□□□□ 0.23
DDX41-201ENST00000330503 NAE1Q13564 534 aa16.49■□□□□ 0.23
DDX41-201ENST00000330503 GTF2H3Q13889 308 aa16.49■□□□□ 0.23
DDX41-201ENST00000330503 FLOT2Q14254 428 aa16.49■□□□□ 0.23
DDX41-201ENST00000330503 FAM83HQ6ZRV2 1179 aaPredicted RBP16.49■□□□□ 0.23
DDX41-201ENST00000330503 HEATR4Q86WZ0 1026 aa16.49■□□□□ 0.23
DDX41-201ENST00000330503 ZFAND4Q86XD8 727 aa16.49■□□□□ 0.23
DDX41-201ENST00000330503 MINDY1Q8N5J2 469 aa16.49■□□□□ 0.23
DDX41-201ENST00000330503 OR4K3Q96R72 315 aa16.49■□□□□ 0.23
DDX41-201ENST00000330503 HOPXQ9BPY8 73 aaPredicted RBP16.49■□□□□ 0.23
DDX41-201ENST00000330503 ACPTQ9BZG2 426 aa16.49■□□□□ 0.23
DDX41-201ENST00000330503 LRTM1Q9HBL6 345 aa16.49■□□□□ 0.23
DDX41-201ENST00000330503 PRKAB1Q9Y478 270 aa16.49■□□□□ 0.23
DDX41-201ENST00000330503 TRPM6Q9BX84 2022 aa16.49■□□□□ 0.23
DDX41-201ENST00000330503 SLC16A8O95907 504 aa16.49■□□□□ 0.23
DDX41-201ENST00000330503 IMPA1P29218 277 aa16.49■□□□□ 0.23
DDX41-201ENST00000330503 MAPK9P45984 424 aa16.49■□□□□ 0.23
DDX41-201ENST00000330503 SLC7A2P52569 658 aa16.49■□□□□ 0.23
DDX41-201ENST00000330503 RPL38P63173 70 aaKnown RBP16.49■□□□□ 0.23
DDX41-201ENST00000330503 CHIT1Q13231 466 aa16.49■□□□□ 0.23
DDX41-201ENST00000330503 TRIM25Q14258 630 aaKnown RBP16.49■□□□□ 0.23
DDX41-201ENST00000330503 FGL2Q14314 439 aa16.49■□□□□ 0.23
DDX41-201ENST00000330503 COL19A1Q14993 1142 aa16.49■□□□□ 0.23
DDX41-201ENST00000330503 KIAA0040Q15053 153 aa16.49■□□□□ 0.23
DDX41-201ENST00000330503 AGERQ15109 404 aa16.49■□□□□ 0.23
DDX41-201ENST00000330503 TMEM196Q5HYL7 178 aa16.49■□□□□ 0.23
DDX41-201ENST00000330503 FBXO15Q8NCQ5 510 aaPredicted RBP16.49■□□□□ 0.23
DDX41-201ENST00000330503 SMRP1Q8NCR6 262 aa16.49■□□□□ 0.23
DDX41-201ENST00000330503 OR2T3Q8NH03 318 aa16.49■□□□□ 0.23
DDX41-201ENST00000330503 OR2L2Q8NH16 312 aa16.49■□□□□ 0.23
DDX41-201ENST00000330503 OR56A3Q8NH54 315 aa16.49■□□□□ 0.23
DDX41-201ENST00000330503 ATL1Q8WXF7 558 aa16.49■□□□□ 0.23
DDX41-201ENST00000330503 LRRC58Q96CX6 371 aa16.49■□□□□ 0.23
DDX41-201ENST00000330503 FOPNLQ96NB1 174 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms