RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 HOXB2P14652 356 aa19.76■□□□□ 0.75
RIPPLY3-201ENST00000329553 EPORP19235 508 aa19.76■□□□□ 0.75
RIPPLY3-201ENST00000329553 HNMTP50135 292 aa19.76■□□□□ 0.75
RIPPLY3-201ENST00000329553 AP1S2P56377 157 aa19.76■□□□□ 0.75
RIPPLY3-201ENST00000329553 GTF2H3Q13889 308 aa19.76■□□□□ 0.75
RIPPLY3-201ENST00000329553 FGL2Q14314 439 aa19.76■□□□□ 0.75
RIPPLY3-201ENST00000329553 PTCHD3Q3KNS1 767 aa19.76■□□□□ 0.75
RIPPLY3-201ENST00000329553 AGKQ53H12 422 aa19.76■□□□□ 0.75
RIPPLY3-201ENST00000329553 ZFAND2BQ8WV99 257 aa19.76■□□□□ 0.75
RIPPLY3-201ENST00000329553 PYCR2Q96C36 320 aa19.76■□□□□ 0.75
RIPPLY3-201ENST00000329553 NTMT1Q9BV86 223 aa19.76■□□□□ 0.75
RIPPLY3-201ENST00000329553 MBNL1Q9NR56 388 aaKnown RBP19.76■□□□□ 0.75
RIPPLY3-201ENST00000329553 PCYT1BQ9Y5K3 369 aaPredicted RBP19.76■□□□□ 0.75
RIPPLY3-201ENST00000329553 ZFC3H1O60293 1989 aaKnown RBP19.76■□□□□ 0.75
RIPPLY3-201ENST00000329553 PABPN1LA6NDY0 278 aaKnown RBP19.76■□□□□ 0.75
RIPPLY3-201ENST00000329553 VEGFDO43915 354 aa19.76■□□□□ 0.75
RIPPLY3-201ENST00000329553 POP7O75817 140 aaKnown RBP19.76■□□□□ 0.75
RIPPLY3-201ENST00000329553 PAK4O96013 591 aaPredicted RBP19.76■□□□□ 0.75
RIPPLY3-201ENST00000329553 SLC6A12P48065 614 aa19.76■□□□□ 0.75
RIPPLY3-201ENST00000329553 ATP4BP51164 291 aa19.76■□□□□ 0.75
RIPPLY3-201ENST00000329553 GRSF1Q12849 480 aaKnown RBP eCLIP19.76■□□□□ 0.75
RIPPLY3-201ENST00000329553 MMEL1Q495T6 779 aa19.76■□□□□ 0.75
RIPPLY3-201ENST00000329553 EEF1AKMT2Q5JPI9 291 aaKnown RBP19.76■□□□□ 0.75
RIPPLY3-201ENST00000329553 TTC23LQ6PF05 361 aa19.76■□□□□ 0.75
RIPPLY3-201ENST00000329553 CRTC3Q6UUV7 619 aa19.76■□□□□ 0.75
RIPPLY3-201ENST00000329553 XKR5Q6UX68 686 aa19.76■□□□□ 0.75
RIPPLY3-201ENST00000329553 Q6ZSR9 355 aa19.76■□□□□ 0.75
RIPPLY3-201ENST00000329553 TMEM126BQ8IUX1 230 aa19.76■□□□□ 0.75
RIPPLY3-201ENST00000329553 ICA1LQ8NDH6 482 aa19.76■□□□□ 0.75
RIPPLY3-201ENST00000329553 OR9I1Q8NGQ6 314 aa19.76■□□□□ 0.75
RIPPLY3-201ENST00000329553 KLK6Q92876 244 aa19.76■□□□□ 0.75
RIPPLY3-201ENST00000329553 LGR4Q9BXB1 951 aa19.76■□□□□ 0.75
RIPPLY3-201ENST00000329553 C8orf33Q9H7E9 229 aaPredicted RBP19.76■□□□□ 0.75
RIPPLY3-201ENST00000329553 GPR34Q9UPC5 381 aa19.76■□□□□ 0.75
RIPPLY3-201ENST00000329553 RNF11Q9Y3C5 154 aa19.76■□□□□ 0.75
RIPPLY3-201ENST00000329553 TMEM265A0A087WTH1 108 aa19.75■□□□□ 0.75
RIPPLY3-201ENST00000329553 XRCC1P18887 633 aaPredicted RBP19.75■□□□□ 0.75
RIPPLY3-201ENST00000329553 DRD1P21728 446 aa19.75■□□□□ 0.75
RIPPLY3-201ENST00000329553 GPX3P22352 226 aa19.75■□□□□ 0.75
RIPPLY3-201ENST00000329553 ROR2Q01974 943 aaKnown RBP19.75■□□□□ 0.75
RIPPLY3-201ENST00000329553 CEACAM7Q14002 265 aa19.75■□□□□ 0.75
RIPPLY3-201ENST00000329553 FLOT2Q14254 428 aa19.75■□□□□ 0.75
RIPPLY3-201ENST00000329553 NUMA1Q14980 2115 aa19.75■□□□□ 0.75
RIPPLY3-201ENST00000329553 PAOXQ6QHF9 649 aa19.75■□□□□ 0.75
RIPPLY3-201ENST00000329553 IL27RAQ6UWB1 636 aa19.75■□□□□ 0.75
RIPPLY3-201ENST00000329553 ST13P4Q8IZP2 240 aaPredicted RBP19.75■□□□□ 0.75
RIPPLY3-201ENST00000329553 ZNF514Q96K75 400 aaPredicted RBP19.75■□□□□ 0.75
RIPPLY3-201ENST00000329553 LINC00615Q96LM1 132 aaPredicted RBP19.75■□□□□ 0.75
RIPPLY3-201ENST00000329553 HBEGFQ99075 208 aa19.75■□□□□ 0.75
RIPPLY3-201ENST00000329553 CCT7Q99832 543 aa19.75■□□□□ 0.75
RIPPLY3-201ENST00000329553 ATG10Q9H0Y0 220 aa19.75■□□□□ 0.75
RIPPLY3-201ENST00000329553 EFCAB1Q9HAE3 211 aa19.75■□□□□ 0.75
RIPPLY3-201ENST00000329553 PFDN4Q9NQP4 134 aa19.75■□□□□ 0.75
RIPPLY3-201ENST00000329553 H3BM21 787 aa19.75■□□□□ 0.75
RIPPLY3-201ENST00000329553 MBTPS2O43462 519 aa19.75■□□□□ 0.75
RIPPLY3-201ENST00000329553 DNTTP04053 509 aa19.75■□□□□ 0.75
RIPPLY3-201ENST00000329553 ASGR2P07307 311 aa19.75■□□□□ 0.75
RIPPLY3-201ENST00000329553 MAP4P27816 1152 aaKnown RBP19.75■□□□□ 0.75
RIPPLY3-201ENST00000329553 DPP6P42658 865 aa19.75■□□□□ 0.75
RIPPLY3-201ENST00000329553 CDK3Q00526 305 aa19.75■□□□□ 0.75
RIPPLY3-201ENST00000329553 AGERQ15109 404 aa19.75■□□□□ 0.75
RIPPLY3-201ENST00000329553 GRAMD1BQ3KR37 738 aa19.75■□□□□ 0.75
RIPPLY3-201ENST00000329553 CCSMST1Q4G0I0 132 aa19.75■□□□□ 0.75
RIPPLY3-201ENST00000329553 OGFOD2Q6N063 350 aa19.75■□□□□ 0.75
RIPPLY3-201ENST00000329553 ZFP1Q6P2D0 407 aa19.75■□□□□ 0.75
RIPPLY3-201ENST00000329553 LRRC70Q7Z2Q7 622 aa19.75■□□□□ 0.75
RIPPLY3-201ENST00000329553 OR14C36Q8NHC7 312 aa19.75■□□□□ 0.75
RIPPLY3-201ENST00000329553 WDR41Q9HAD4 459 aa19.75■□□□□ 0.75
RIPPLY3-201ENST00000329553 PRKAB1Q9Y478 270 aa19.75■□□□□ 0.75
RIPPLY3-201ENST00000329553 DTNAQ9Y4J8 743 aa19.75■□□□□ 0.75
RIPPLY3-201ENST00000329553 PRR23AA6NEV1 266 aa19.74■□□□□ 0.75
RIPPLY3-201ENST00000329553 WDR47O94967 919 aa19.74■□□□□ 0.75
RIPPLY3-201ENST00000329553 EBLN1P0CF75 366 aa19.74■□□□□ 0.75
RIPPLY3-201ENST00000329553 HMOX2P30519 316 aa19.74■□□□□ 0.75
RIPPLY3-201ENST00000329553 PIK3CGP48736 1102 aa19.74■□□□□ 0.75
RIPPLY3-201ENST00000329553 STX1BP61266 288 aa19.74■□□□□ 0.75
RIPPLY3-201ENST00000329553 FOLH1Q04609 750 aa19.74■□□□□ 0.75
RIPPLY3-201ENST00000329553 INPP5AQ14642 412 aa19.74■□□□□ 0.75
RIPPLY3-201ENST00000329553 ABRAXAS2Q15018 415 aa19.74■□□□□ 0.75
RIPPLY3-201ENST00000329553 PDK3Q15120 406 aa19.74■□□□□ 0.75
RIPPLY3-201ENST00000329553 KIF19Q2TAC6 998 aa19.74■□□□□ 0.75
RIPPLY3-201ENST00000329553 LIN52Q52LA3 116 aa19.74■□□□□ 0.75
RIPPLY3-201ENST00000329553 CWF19L1Q69YN2 538 aaKnown RBP19.74■□□□□ 0.75
RIPPLY3-201ENST00000329553 NEK5Q6P3R8 708 aa19.74■□□□□ 0.75
RIPPLY3-201ENST00000329553 DOK6Q6PKX4 331 aa19.74■□□□□ 0.75
RIPPLY3-201ENST00000329553 C11orf96Q7Z7L8 435 aa19.74■□□□□ 0.75
RIPPLY3-201ENST00000329553 FUNDC1Q8IVP5 155 aa19.74■□□□□ 0.75
RIPPLY3-201ENST00000329553 FAM131CQ96AQ9 280 aa19.74■□□□□ 0.75
RIPPLY3-201ENST00000329553 FBXL8Q96CD0 374 aa19.74■□□□□ 0.75
RIPPLY3-201ENST00000329553 BCAP29Q9UHQ4 241 aa19.74■□□□□ 0.75
RIPPLY3-201ENST00000329553 SLC22A14Q9Y267 594 aa19.74■□□□□ 0.75
RIPPLY3-201ENST00000329553 C17orf113A0A1B0GUU1 675 aa19.74■□□□□ 0.75
RIPPLY3-201ENST00000329553 FFAR3O14843 346 aa19.74■□□□□ 0.75
RIPPLY3-201ENST00000329553 GPR42O15529 346 aa19.74■□□□□ 0.75
RIPPLY3-201ENST00000329553 BDKRB1P46663 353 aa19.74■□□□□ 0.75
RIPPLY3-201ENST00000329553 DIO3P55073 304 aa19.74■□□□□ 0.75
RIPPLY3-201ENST00000329553 NME5P56597 212 aa19.74■□□□□ 0.75
RIPPLY3-201ENST00000329553 MS4A2Q01362 244 aa19.74■□□□□ 0.75
RIPPLY3-201ENST00000329553 PLA2G4EQ3MJ16 856 aa19.74■□□□□ 0.75
RIPPLY3-201ENST00000329553 UGT2A3Q6UWM9 527 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms