RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 CDC14AQ9UNH5 594 aa5.03□□□□□ -1.6
LRIT3-201ENST00000327908 SRPK3Q9UPE1 567 aa5.03□□□□□ -1.6
LRIT3-201ENST00000327908 RUVBL2Q9Y230 463 aaKnown RBP5.03□□□□□ -1.6
LRIT3-201ENST00000327908 B4DGG1 531 aa5.03□□□□□ -1.6
LRIT3-201ENST00000327908 B4E171 279 aa5.03□□□□□ -1.6
LRIT3-201ENST00000327908 SGTAO43765 313 aa5.03□□□□□ -1.6
LRIT3-201ENST00000327908 GUCY1B2O75343 617 aa5.03□□□□□ -1.6
LRIT3-201ENST00000327908 CPNE6O95741 557 aa5.03□□□□□ -1.6
LRIT3-201ENST00000327908 C1QAP02745 245 aa5.03□□□□□ -1.6
LRIT3-201ENST00000327908 TFEBP19484 476 aa5.03□□□□□ -1.6
LRIT3-201ENST00000327908 IL10P22301 178 aa5.03□□□□□ -1.6
LRIT3-201ENST00000327908 PLA2G5P39877 138 aa5.03□□□□□ -1.6
LRIT3-201ENST00000327908 TSPAN7P41732 249 aa5.03□□□□□ -1.6
LRIT3-201ENST00000327908 CAPZBP47756 277 aa5.03□□□□□ -1.6
LRIT3-201ENST00000327908 CSRP3P50461 194 aa5.03□□□□□ -1.6
LRIT3-201ENST00000327908 RPS15AP62244 130 aaKnown RBP5.03□□□□□ -1.6
LRIT3-201ENST00000327908 AP2B1P63010 937 aa5.03□□□□□ -1.6
LRIT3-201ENST00000327908 SPIDRQ14159 915 aa5.03□□□□□ -1.6
LRIT3-201ENST00000327908 NAA30Q147X3 362 aaPredicted RBP5.03□□□□□ -1.6
LRIT3-201ENST00000327908 TECRLQ5HYJ1 363 aa5.03□□□□□ -1.6
LRIT3-201ENST00000327908 MROH9Q5TGP6 573 aa5.03□□□□□ -1.6
LRIT3-201ENST00000327908 GARNL3Q5VVW2 1013 aa5.03□□□□□ -1.6
LRIT3-201ENST00000327908 LIPJQ5W064 366 aa5.03□□□□□ -1.6
LRIT3-201ENST00000327908 PAQR3Q6TCH7 311 aa5.03□□□□□ -1.6
LRIT3-201ENST00000327908 IGF2-ASQ6U949 168 aa5.03□□□□□ -1.6
LRIT3-201ENST00000327908 DET1Q7L5Y6 550 aa5.03□□□□□ -1.6
LRIT3-201ENST00000327908 CPNE9Q8IYJ1 553 aa5.03□□□□□ -1.6
LRIT3-201ENST00000327908 CCDC63Q8NA47 563 aa5.03□□□□□ -1.6
LRIT3-201ENST00000327908 OR56A3Q8NH54 315 aa5.03□□□□□ -1.6
LRIT3-201ENST00000327908 STARD8Q92502 1023 aa5.03□□□□□ -1.6
LRIT3-201ENST00000327908 TLCD1Q96CP7 247 aa5.03□□□□□ -1.6
LRIT3-201ENST00000327908 ERLEC1Q96DZ1 483 aa5.03□□□□□ -1.6
LRIT3-201ENST00000327908 TMEM168Q9H0V1 697 aa5.03□□□□□ -1.6
LRIT3-201ENST00000327908 LRRN3Q9H3W5 708 aa5.03□□□□□ -1.6
LRIT3-201ENST00000327908 PRDM9Q9NQV7 894 aa5.03□□□□□ -1.6
LRIT3-201ENST00000327908 ABCF3Q9NUQ8 709 aa5.03□□□□□ -1.6
LRIT3-201ENST00000327908 PIH1D1Q9NWS0 290 aaKnown RBP5.03□□□□□ -1.6
LRIT3-201ENST00000327908 KCNK6Q9Y257 313 aa5.03□□□□□ -1.6
LRIT3-201ENST00000327908 AP1M2Q9Y6Q5 423 aa5.03□□□□□ -1.6
LRIT3-201ENST00000327908 OR5K3A6NET4 321 aa5.02□□□□□ -1.61
LRIT3-201ENST00000327908 K7EPI3 171 aa5.02□□□□□ -1.61
LRIT3-201ENST00000327908 NOBOXO60393 691 aa5.02□□□□□ -1.61
LRIT3-201ENST00000327908 SRPX2O60687 465 aaPredicted RBP5.02□□□□□ -1.61
LRIT3-201ENST00000327908 KRT6AP02538 564 aa5.02□□□□□ -1.61
LRIT3-201ENST00000327908 KRT6BP04259 564 aa5.02□□□□□ -1.61
LRIT3-201ENST00000327908 EZRP15311 586 aaKnown RBP5.02□□□□□ -1.61
LRIT3-201ENST00000327908 MAPK1P28482 360 aa5.02□□□□□ -1.61
LRIT3-201ENST00000327908 CASP2P42575 452 aa5.02□□□□□ -1.61
LRIT3-201ENST00000327908 TSFMP43897 325 aaKnown RBP5.02□□□□□ -1.61
LRIT3-201ENST00000327908 KRT6CP48668 564 aa5.02□□□□□ -1.61
LRIT3-201ENST00000327908 NUMBP49757 651 aa5.02□□□□□ -1.61
LRIT3-201ENST00000327908 ARSFP54793 590 aa5.02□□□□□ -1.61
LRIT3-201ENST00000327908 MEF2AQ02078 507 aaPredicted RBP5.02□□□□□ -1.61
LRIT3-201ENST00000327908 RGS1Q08116 209 aa5.02□□□□□ -1.61
LRIT3-201ENST00000327908 SPEM2Q0P670 501 aa5.02□□□□□ -1.61
LRIT3-201ENST00000327908 SETDB1Q15047 1291 aa5.02□□□□□ -1.61
LRIT3-201ENST00000327908 ACSBG2Q5FVE4 666 aa5.02□□□□□ -1.61
LRIT3-201ENST00000327908 TNFAIP8L3Q5GJ75 292 aa5.02□□□□□ -1.61
LRIT3-201ENST00000327908 PRAMEF14Q5SWL7 426 aa5.02□□□□□ -1.61
LRIT3-201ENST00000327908 PRAMEF13Q5VWM6 474 aa5.02□□□□□ -1.61
LRIT3-201ENST00000327908 LIPMQ5VYY2 423 aa5.02□□□□□ -1.61
LRIT3-201ENST00000327908 TMEM71Q6P5X7 295 aa5.02□□□□□ -1.61
LRIT3-201ENST00000327908 ZNF549Q6P9A3 640 aa5.02□□□□□ -1.61
LRIT3-201ENST00000327908 TLDC1Q6P9B6 456 aa5.02□□□□□ -1.61
LRIT3-201ENST00000327908 SLC30A9Q6PML9 568 aa5.02□□□□□ -1.61
LRIT3-201ENST00000327908 RFLNAQ6ZTI6 216 aa5.02□□□□□ -1.61
LRIT3-201ENST00000327908 AGGF1Q8N302 714 aaeCLIP5.02□□□□□ -1.61
LRIT3-201ENST00000327908 NATD1Q8N6N6 113 aa5.02□□□□□ -1.61
LRIT3-201ENST00000327908 BAHD1Q8TBE0 780 aaPredicted RBP5.02□□□□□ -1.61
LRIT3-201ENST00000327908 CCT6BQ92526 530 aa5.02□□□□□ -1.61
LRIT3-201ENST00000327908 L3HYPDHQ96EM0 354 aa5.02□□□□□ -1.61
LRIT3-201ENST00000327908 TCTN2Q96GX1 697 aa5.02□□□□□ -1.61
LRIT3-201ENST00000327908 LIN37Q96GY3 246 aaPredicted RBP5.02□□□□□ -1.61
LRIT3-201ENST00000327908 DPH2Q9BQC3 489 aaPredicted RBP5.02□□□□□ -1.61
LRIT3-201ENST00000327908 SEMA6CQ9H3T2 930 aa5.02□□□□□ -1.61
LRIT3-201ENST00000327908 EBF2Q9HAK2 575 aa5.02□□□□□ -1.61
LRIT3-201ENST00000327908 IMP3Q9NV31 184 aaKnown RBP5.02□□□□□ -1.61
LRIT3-201ENST00000327908 TMEM45AQ9NWC5 275 aa5.02□□□□□ -1.61
LRIT3-201ENST00000327908 GULP1Q9UBP9 304 aa5.02□□□□□ -1.61
LRIT3-201ENST00000327908 VTI1BQ9UEU0 232 aa5.02□□□□□ -1.61
LRIT3-201ENST00000327908 TRPS1Q9UHF7 1281 aa5.02□□□□□ -1.61
LRIT3-201ENST00000327908 NFS1Q9Y697 457 aa5.02□□□□□ -1.61
LRIT3-201ENST00000327908 TNRC18O15417 2968 aaPredicted RBP5.02□□□□□ -1.61
LRIT3-201ENST00000327908 LRP4O75096 1905 aa5.02□□□□□ -1.61
LRIT3-201ENST00000327908 PLXNB3Q9ULL4 1909 aa5.02□□□□□ -1.61
LRIT3-201ENST00000327908 SERTM1A2A2V5 107 aa5.02□□□□□ -1.61
LRIT3-201ENST00000327908 CDK2AP1O14519 115 aa5.02□□□□□ -1.61
LRIT3-201ENST00000327908 KLF11O14901 512 aa5.02□□□□□ -1.61
LRIT3-201ENST00000327908 FFAR2O15552 330 aa5.02□□□□□ -1.61
LRIT3-201ENST00000327908 TRIM13O60858 407 aa5.02□□□□□ -1.61
LRIT3-201ENST00000327908 BANF1O75531 89 aa5.02□□□□□ -1.61
LRIT3-201ENST00000327908 STK16O75716 305 aa5.02□□□□□ -1.61
LRIT3-201ENST00000327908 UBXN7O94888 489 aa5.02□□□□□ -1.61
LRIT3-201ENST00000327908 C9P02748 559 aa5.02□□□□□ -1.61
LRIT3-201ENST00000327908 SLC35E2BP0CK96 405 aa5.02□□□□□ -1.61
LRIT3-201ENST00000327908 CPA3P15088 417 aa5.02□□□□□ -1.61
LRIT3-201ENST00000327908 EPB42P16452 691 aa5.02□□□□□ -1.61
LRIT3-201ENST00000327908 GNAZP19086 355 aa5.02□□□□□ -1.61
LRIT3-201ENST00000327908 AHRP35869 848 aa5.02□□□□□ -1.61
LRIT3-201ENST00000327908 CCR8P51685 355 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms