RNA–Protein interactions for RNA: ENST00000326656.12

PTPMT1-201, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-201ENST00000326656 TAB3Q8N5C8 712 aaPredicted RBP17.08■□□□□ 0.32
PTPMT1-201ENST00000326656 OR6P1Q8NGX9 317 aa17.08■□□□□ 0.32
PTPMT1-201ENST00000326656 DENND1AQ8TEH3 1009 aa17.08■□□□□ 0.32
PTPMT1-201ENST00000326656 ATG4AQ8WYN0 398 aa17.08■□□□□ 0.32
PTPMT1-201ENST00000326656 NACC2Q96BF6 587 aa17.08■□□□□ 0.32
PTPMT1-201ENST00000326656 NRTNQ99748 197 aa17.08■□□□□ 0.32
PTPMT1-201ENST00000326656 DESI2Q9BSY9 194 aa17.08■□□□□ 0.32
PTPMT1-201ENST00000326656 RAB6BQ9NRW1 208 aa17.08■□□□□ 0.32
PTPMT1-201ENST00000326656 SPHK1Q9NYA1 384 aa17.08■□□□□ 0.32
PTPMT1-201ENST00000326656 PAK5Q9P286 719 aa17.08■□□□□ 0.32
PTPMT1-201ENST00000326656 VPS4AQ9UN37 437 aa17.08■□□□□ 0.32
PTPMT1-201ENST00000326656 PLCL2Q9UPR0 1127 aa17.08■□□□□ 0.32
PTPMT1-201ENST00000326656 TDRKHQ9Y2W6 561 aaKnown RBP17.08■□□□□ 0.32
PTPMT1-201ENST00000326656 CAPN6Q9Y6Q1 641 aa17.08■□□□□ 0.32
PTPMT1-201ENST00000326656 UTP20O75691 2785 aaKnown RBP17.08■□□□□ 0.32
PTPMT1-201ENST00000326656 SPTAN1Q13813 2472 aaKnown RBP17.07■□□□□ 0.32
PTPMT1-201ENST00000326656 ZSCAN9O15535 394 aaPredicted RBP17.07■□□□□ 0.32
PTPMT1-201ENST00000326656 KRT86O43790 486 aa17.07■□□□□ 0.32
PTPMT1-201ENST00000326656 OR1I1O60431 355 aa17.07■□□□□ 0.32
PTPMT1-201ENST00000326656 GPC4O75487 556 aa17.07■□□□□ 0.32
PTPMT1-201ENST00000326656 IFNB1P01574 187 aa17.07■□□□□ 0.32
PTPMT1-201ENST00000326656 APOA4P06727 396 aa17.07■□□□□ 0.32
PTPMT1-201ENST00000326656 PRAMEP78395 509 aa17.07■□□□□ 0.32
PTPMT1-201ENST00000326656 DCDP81605 110 aaKnown RBP17.07■□□□□ 0.32
PTPMT1-201ENST00000326656 BRD3Q15059 726 aa17.07■□□□□ 0.32
PTPMT1-201ENST00000326656 ZIC1Q15915 447 aa17.07■□□□□ 0.32
PTPMT1-201ENST00000326656 KYNUQ16719 465 aa17.07■□□□□ 0.32
PTPMT1-201ENST00000326656 UNC5DQ6UXZ4 953 aa17.07■□□□□ 0.32
PTPMT1-201ENST00000326656 FDCSPQ8NFU4 85 aa17.07■□□□□ 0.32
PTPMT1-201ENST00000326656 CPT1CQ8TCG5 803 aa17.07■□□□□ 0.32
PTPMT1-201ENST00000326656 FER1L6-AS2Q96M78 137 aa17.07■□□□□ 0.32
PTPMT1-201ENST00000326656 GBP5Q96PP8 586 aa17.07■□□□□ 0.32
PTPMT1-201ENST00000326656 SMAD5Q99717 465 aaKnown RBP17.07■□□□□ 0.32
PTPMT1-201ENST00000326656 GPR83Q9NYM4 423 aa17.07■□□□□ 0.32
PTPMT1-201ENST00000326656 GPN3Q9UHW5 284 aaPredicted RBP17.07■□□□□ 0.32
PTPMT1-201ENST00000326656 ANAPC5Q9UJX4 755 aa17.07■□□□□ 0.32
PTPMT1-201ENST00000326656 TCAF1Q9Y4C2 921 aa17.07■□□□□ 0.32
PTPMT1-201ENST00000326656 MAP4K5Q9Y4K4 846 aa17.07■□□□□ 0.32
PTPMT1-201ENST00000326656 ISM1B1AKI9 464 aa17.06■□□□□ 0.32
PTPMT1-201ENST00000326656 KPNA5O15131 536 aa17.06■□□□□ 0.32
PTPMT1-201ENST00000326656 SORBS2O94875 1100 aaKnown RBP17.06■□□□□ 0.32
PTPMT1-201ENST00000326656 SLCO2B1O94956 709 aa17.06■□□□□ 0.32
PTPMT1-201ENST00000326656 FKBP9O95302 570 aa17.06■□□□□ 0.32
PTPMT1-201ENST00000326656 APRTP07741 180 aa17.06■□□□□ 0.32
PTPMT1-201ENST00000326656 GP1BBP13224 206 aa17.06■□□□□ 0.32
PTPMT1-201ENST00000326656 CCR7P32248 378 aa17.06■□□□□ 0.32
PTPMT1-201ENST00000326656 TTPAP49638 278 aa17.06■□□□□ 0.32
PTPMT1-201ENST00000326656 CCNG2Q16589 344 aa17.06■□□□□ 0.32
PTPMT1-201ENST00000326656 PCID2Q5JVF3 399 aa17.06■□□□□ 0.32
PTPMT1-201ENST00000326656 DRICH1Q6PGQ1 229 aaPredicted RBP17.06■□□□□ 0.32
PTPMT1-201ENST00000326656 MICALCLQ6ZW33 695 aa17.06■□□□□ 0.32
PTPMT1-201ENST00000326656 ZNF534Q76KX8 674 aa17.06■□□□□ 0.32
PTPMT1-201ENST00000326656 TRIM73Q86UV7 250 aa17.06■□□□□ 0.32
PTPMT1-201ENST00000326656 MPP5Q8N3R9 675 aa17.06■□□□□ 0.32
PTPMT1-201ENST00000326656 CCDC89Q8N998 374 aa17.06■□□□□ 0.32
PTPMT1-201ENST00000326656 OR2Y1Q8NGV0 311 aa17.06■□□□□ 0.32
PTPMT1-201ENST00000326656 PSMG3-AS1Q96PY0 264 aa17.06■□□□□ 0.32
PTPMT1-201ENST00000326656 SPRTNQ9H040 489 aaPredicted RBP17.06■□□□□ 0.32
PTPMT1-201ENST00000326656 EIF2B3Q9NR50 452 aaKnown RBP17.06■□□□□ 0.32
PTPMT1-201ENST00000326656 ENAMQ9NRM1 1142 aa17.06■□□□□ 0.32
PTPMT1-201ENST00000326656 TXLNGQ9NUQ3 528 aa17.06■□□□□ 0.32
PTPMT1-201ENST00000326656 SLC2A6Q9UGQ3 507 aa17.06■□□□□ 0.32
PTPMT1-201ENST00000326656 CDYLQ9Y232 598 aa17.06■□□□□ 0.32
PTPMT1-201ENST00000326656 DRG1Q9Y295 367 aaKnown RBP17.06■□□□□ 0.32
PTPMT1-201ENST00000326656 ZKSCAN5Q9Y2L8 839 aa17.06■□□□□ 0.32
PTPMT1-201ENST00000326656 MRFAP1Q9Y605 127 aa17.06■□□□□ 0.32
PTPMT1-201ENST00000326656 ANKRD12Q6UB98 2062 aa17.06■□□□□ 0.32
PTPMT1-201ENST00000326656 SPTBN1Q01082 2364 aaKnown RBP17.06■□□□□ 0.32
PTPMT1-201ENST00000326656 A0A0U1RQJ8 604 aa17.05■□□□□ 0.32
PTPMT1-201ENST00000326656 GOLGA6L6A8MZA4 724 aa17.05■□□□□ 0.32
PTPMT1-201ENST00000326656 PEX12O00623 359 aa17.05■□□□□ 0.32
PTPMT1-201ENST00000326656 PRMT5O14744 637 aaPredicted RBP17.05■□□□□ 0.32
PTPMT1-201ENST00000326656 ZNF185O15231 689 aa17.05■□□□□ 0.32
PTPMT1-201ENST00000326656 S1PR4O95977 384 aa17.05■□□□□ 0.32
PTPMT1-201ENST00000326656 CBSLP0DN79 551 aa17.05■□□□□ 0.32
PTPMT1-201ENST00000326656 CD9P21926 228 aa17.05■□□□□ 0.32
PTPMT1-201ENST00000326656 PKLRP30613 574 aa17.05■□□□□ 0.32
PTPMT1-201ENST00000326656 CBSP35520 551 aa17.05■□□□□ 0.32
PTPMT1-201ENST00000326656 GRIA1P42261 906 aa17.05■□□□□ 0.32
PTPMT1-201ENST00000326656 ARSFP54793 590 aa17.05■□□□□ 0.32
PTPMT1-201ENST00000326656 SOX8P57073 446 aa17.05■□□□□ 0.32
PTPMT1-201ENST00000326656 HSPA14Q0VDF9 509 aa17.05■□□□□ 0.32
PTPMT1-201ENST00000326656 NADK2Q4G0N4 442 aa17.05■□□□□ 0.32
PTPMT1-201ENST00000326656 NKAIN1Q4KMZ8 207 aa17.05■□□□□ 0.32
PTPMT1-201ENST00000326656 YOD1Q5VVQ6 348 aaPredicted RBP17.05■□□□□ 0.32
PTPMT1-201ENST00000326656 MLIPQ5VWP3 458 aa17.05■□□□□ 0.32
PTPMT1-201ENST00000326656 JMJD6Q6NYC1 403 aaPredicted RBP17.05■□□□□ 0.32
PTPMT1-201ENST00000326656 TTC23LQ6PF05 361 aa17.05■□□□□ 0.32
PTPMT1-201ENST00000326656 LRRC6Q86X45 466 aa17.05■□□□□ 0.32
PTPMT1-201ENST00000326656 DCUN1D3Q8IWE4 304 aa17.05■□□□□ 0.32
PTPMT1-201ENST00000326656 PPHLN1Q8NEY8 458 aaKnown RBP17.05■□□□□ 0.32
PTPMT1-201ENST00000326656 DLG3Q92796 817 aa17.05■□□□□ 0.32
PTPMT1-201ENST00000326656 PTERQ96BW5 349 aa17.05■□□□□ 0.32
PTPMT1-201ENST00000326656 ZNF778Q96MU6 729 aa17.05■□□□□ 0.32
PTPMT1-201ENST00000326656 PANX3Q96QZ0 392 aa17.05■□□□□ 0.32
PTPMT1-201ENST00000326656 NDC1Q9BTX1 674 aa17.05■□□□□ 0.32
PTPMT1-201ENST00000326656 NUDT9Q9BW91 350 aa17.05■□□□□ 0.32
PTPMT1-201ENST00000326656 INTS7Q9NVH2 962 aaKnown RBP17.05■□□□□ 0.32
PTPMT1-201ENST00000326656 IFT80Q9P2H3 777 aaPredicted RBP17.05■□□□□ 0.32
PTPMT1-201ENST00000326656 FER1L5A0AVI2 2057 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms