RNA–Protein interactions for RNA: ENST00000326335.8

CUL4A-201, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 3,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-201ENST00000326335 SUCOQ9UBS9 1254 aaKnown RBP10.4□□□□□ -0.74
CUL4A-201ENST00000326335 ANAPC2Q9UJX6 822 aa10.4□□□□□ -0.74
CUL4A-201ENST00000326335 CKAP5Q14008 2032 aa10.4□□□□□ -0.75
CUL4A-201ENST00000326335 LSM1O15116 133 aaKnown RBP10.4□□□□□ -0.75
CUL4A-201ENST00000326335 POP4O95707 220 aaKnown RBP10.4□□□□□ -0.75
CUL4A-201ENST00000326335 TIMP1P01033 207 aa10.4□□□□□ -0.75
CUL4A-201ENST00000326335 TGFB1P01137 390 aa10.4□□□□□ -0.75
CUL4A-201ENST00000326335 CA3P07451 260 aa10.4□□□□□ -0.75
CUL4A-201ENST00000326335 CTSLP07711 333 aa10.4□□□□□ -0.75
CUL4A-201ENST00000326335 ELK4P28324 431 aa10.4□□□□□ -0.75
CUL4A-201ENST00000326335 C16orf72Q14CZ0 275 aa10.4□□□□□ -0.75
CUL4A-201ENST00000326335 HKDC1Q2TB90 917 aa10.4□□□□□ -0.75
CUL4A-201ENST00000326335 KLHDC10Q6PID8 442 aa10.4□□□□□ -0.75
CUL4A-201ENST00000326335 RD3Q7Z3Z2 195 aa10.4□□□□□ -0.75
CUL4A-201ENST00000326335 CYP2U1Q7Z449 544 aa10.4□□□□□ -0.75
CUL4A-201ENST00000326335 TMC8Q8IU68 726 aa10.4□□□□□ -0.75
CUL4A-201ENST00000326335 SYT12Q8IV01 421 aa10.4□□□□□ -0.75
CUL4A-201ENST00000326335 METTL25Q8N6Q8 603 aa10.4□□□□□ -0.75
CUL4A-201ENST00000326335 OR4K1Q8NGD4 311 aa10.4□□□□□ -0.75
CUL4A-201ENST00000326335 FIBINQ8TAL6 211 aa10.4□□□□□ -0.75
CUL4A-201ENST00000326335 SLC13A3Q8WWT9 602 aa10.4□□□□□ -0.75
CUL4A-201ENST00000326335 MACROD1Q9BQ69 325 aa10.4□□□□□ -0.75
CUL4A-201ENST00000326335 SORBS1Q9BX66 1292 aaKnown RBP10.4□□□□□ -0.75
CUL4A-201ENST00000326335 ACTL8Q9H568 366 aa10.4□□□□□ -0.75
CUL4A-201ENST00000326335 DUS2Q9NX74 493 aaKnown RBP10.4□□□□□ -0.75
CUL4A-201ENST00000326335 NUDT4Q9NZJ9 180 aa10.4□□□□□ -0.75
CUL4A-201ENST00000326335 C5AR2Q9P296 337 aa10.4□□□□□ -0.75
CUL4A-201ENST00000326335 CELSR3Q9NYQ7 3312 aa10.4□□□□□ -0.75
CUL4A-201ENST00000326335 CABIN1Q9Y6J0 2220 aa10.39□□□□□ -0.75
CUL4A-201ENST00000326335 E7EQ34 232 aa10.39□□□□□ -0.75
CUL4A-201ENST00000326335 HTRA2O43464 458 aaPredicted RBP10.39□□□□□ -0.75
CUL4A-201ENST00000326335 RGS14O43566 566 aa10.39□□□□□ -0.75
CUL4A-201ENST00000326335 KIF1CO43896 1103 aaKnown RBP10.39□□□□□ -0.75
CUL4A-201ENST00000326335 PRKD3O94806 890 aa10.39□□□□□ -0.75
CUL4A-201ENST00000326335 SLC16A8O95907 504 aa10.39□□□□□ -0.75
CUL4A-201ENST00000326335 PGRP06401 933 aa10.39□□□□□ -0.75
CUL4A-201ENST00000326335 HERC3Q15034 1050 aa10.39□□□□□ -0.75
CUL4A-201ENST00000326335 ZCCHC8Q6NZY4 707 aaKnown RBP10.39□□□□□ -0.75
CUL4A-201ENST00000326335 CCDC149Q6ZUS6 474 aa10.39□□□□□ -0.75
CUL4A-201ENST00000326335 NECAB2Q7Z6G3 386 aa10.39□□□□□ -0.75
CUL4A-201ENST00000326335 TSPAN14Q8NG11 270 aa10.39□□□□□ -0.75
CUL4A-201ENST00000326335 FAM120BQ96EK7 910 aaKnown RBP10.39□□□□□ -0.75
CUL4A-201ENST00000326335 HHIPL1Q96JK4 782 aa10.39□□□□□ -0.75
CUL4A-201ENST00000326335 CGREF1Q99674 301 aa10.39□□□□□ -0.75
CUL4A-201ENST00000326335 EMILIN2Q9BXX0 1053 aa10.39□□□□□ -0.75
CUL4A-201ENST00000326335 ACPTQ9BZG2 426 aa10.39□□□□□ -0.75
CUL4A-201ENST00000326335 ZBP1Q9H171 429 aa10.39□□□□□ -0.75
CUL4A-201ENST00000326335 PRDM8Q9NQV8 689 aa10.39□□□□□ -0.75
CUL4A-201ENST00000326335 TM7SF3Q9NS93 570 aa10.39□□□□□ -0.75
CUL4A-201ENST00000326335 SPASTQ9UBP0 616 aa10.39□□□□□ -0.75
CUL4A-201ENST00000326335 TMPRSS11EQ9UL52 423 aa10.39□□□□□ -0.75
CUL4A-201ENST00000326335 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.39□□□□□ -0.75
CUL4A-201ENST00000326335 FADS2P1A8MWK0 482 aa10.39□□□□□ -0.75
CUL4A-201ENST00000326335 HS6ST1O60243 411 aa10.39□□□□□ -0.75
CUL4A-201ENST00000326335 CLDN9O95484 217 aa10.39□□□□□ -0.75
CUL4A-201ENST00000326335 HSPA1AP0DMV8 641 aaKnown RBP10.39□□□□□ -0.75
CUL4A-201ENST00000326335 HSPA1BP0DMV9 641 aaKnown RBP10.39□□□□□ -0.75
CUL4A-201ENST00000326335 BCKDHAP12694 445 aa10.39□□□□□ -0.75
CUL4A-201ENST00000326335 ATP1B2P14415 290 aaPredicted RBP10.39□□□□□ -0.75
CUL4A-201ENST00000326335 ZNF26P17031 533 aaPredicted RBP10.39□□□□□ -0.75
CUL4A-201ENST00000326335 SLC7A1P30825 629 aa10.39□□□□□ -0.75
CUL4A-201ENST00000326335 S100A3P33764 101 aa10.39□□□□□ -0.75
CUL4A-201ENST00000326335 SOX9P48436 509 aa10.39□□□□□ -0.75
CUL4A-201ENST00000326335 ALDH9A1P49189 494 aa10.39□□□□□ -0.75
CUL4A-201ENST00000326335 SPINT3P49223 89 aa10.39□□□□□ -0.75
CUL4A-201ENST00000326335 SUOXP51687 545 aa10.39□□□□□ -0.75
CUL4A-201ENST00000326335 LBX1P52954 281 aa10.39□□□□□ -0.75
CUL4A-201ENST00000326335 ARHGAP15Q53QZ3 475 aa10.39□□□□□ -0.75
CUL4A-201ENST00000326335 CERS6Q6ZMG9 384 aa10.39□□□□□ -0.75
CUL4A-201ENST00000326335 Q6ZNB5 142 aa10.39□□□□□ -0.75
CUL4A-201ENST00000326335 ADGRD2Q7Z7M1 963 aa10.39□□□□□ -0.75
CUL4A-201ENST00000326335 ZNF740Q8NDX6 193 aa10.39□□□□□ -0.75
CUL4A-201ENST00000326335 RNF31Q96EP0 1072 aa10.39□□□□□ -0.75
CUL4A-201ENST00000326335 SCHIP1Q9P0W5 487 aaPredicted RBP10.39□□□□□ -0.75
CUL4A-201ENST00000326335 RAPGEFL1Q9UHV5 662 aa10.39□□□□□ -0.75
CUL4A-201ENST00000326335 PCDHB1Q9Y5F3 818 aa10.39□□□□□ -0.75
CUL4A-201ENST00000326335 CCDC88CQ9P219 2028 aa10.39□□□□□ -0.75
CUL4A-201ENST00000326335 MANBAO00462 879 aa10.38□□□□□ -0.75
CUL4A-201ENST00000326335 KCNH1O95259 989 aa10.38□□□□□ -0.75
CUL4A-201ENST00000326335 LDLRP01130 860 aa10.38□□□□□ -0.75
CUL4A-201ENST00000326335 EPHX1P07099 455 aa10.38□□□□□ -0.75
CUL4A-201ENST00000326335 FGF4P08620 206 aa10.38□□□□□ -0.75
CUL4A-201ENST00000326335 IL7RP16871 459 aa10.38□□□□□ -0.75
CUL4A-201ENST00000326335 MTHFRP42898 656 aa10.38□□□□□ -0.75
CUL4A-201ENST00000326335 DGKGP49619 791 aa10.38□□□□□ -0.75
CUL4A-201ENST00000326335 LSM3P62310 102 aaKnown RBP10.38□□□□□ -0.75
CUL4A-201ENST00000326335 SIM2Q14190 667 aaPredicted RBP10.38□□□□□ -0.75
CUL4A-201ENST00000326335 DUS1LQ6P1R4 473 aaKnown RBP10.38□□□□□ -0.75
CUL4A-201ENST00000326335 TXNDC11Q6PKC3 985 aa10.38□□□□□ -0.75
CUL4A-201ENST00000326335 EPHX4Q8IUS5 362 aa10.38□□□□□ -0.75
CUL4A-201ENST00000326335 OR52J3Q8NH60 311 aa10.38□□□□□ -0.75
CUL4A-201ENST00000326335 MCOLN3Q8TDD5 553 aa10.38□□□□□ -0.75
CUL4A-201ENST00000326335 HIC2Q96JB3 615 aa10.38□□□□□ -0.75
CUL4A-201ENST00000326335 PANX1Q96RD7 426 aa10.38□□□□□ -0.75
CUL4A-201ENST00000326335 NR1H4Q96RI1 486 aaPredicted RBP10.38□□□□□ -0.75
CUL4A-201ENST00000326335 ZNF382Q96SR6 550 aa10.38□□□□□ -0.75
CUL4A-201ENST00000326335 SLC6A17Q9H1V8 727 aa10.38□□□□□ -0.75
CUL4A-201ENST00000326335 OR51B5Q9H339 312 aa10.38□□□□□ -0.75
CUL4A-201ENST00000326335 ZDHHC3Q9NYG2 299 aa10.38□□□□□ -0.75
CUL4A-201ENST00000326335 CD300AQ9UGN4 299 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms