RNA–Protein interactions for RNA: ENST00000323668.11

TCOF1-201, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCOF1, Length 4,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-201ENST00000323668 MTERF1Q99551 399 aaKnown RBP14.44□□□□□ -0.1
TCOF1-201ENST00000323668 SLC29A3Q9BZD2 475 aa14.44□□□□□ -0.1
TCOF1-201ENST00000323668 CRISPLD1Q9H336 500 aa14.44□□□□□ -0.1
TCOF1-201ENST00000323668 MANBAO00462 879 aa14.43□□□□□ -0.1
TCOF1-201ENST00000323668 KDELR3O43731 214 aa14.43□□□□□ -0.1
TCOF1-201ENST00000323668 EBLN1P0CF75 366 aa14.43□□□□□ -0.1
TCOF1-201ENST00000323668 RPL17P18621 184 aaKnown RBP14.43□□□□□ -0.1
TCOF1-201ENST00000323668 GABRR2P28476 465 aa14.43□□□□□ -0.1
TCOF1-201ENST00000323668 MPPE1Q53F39 396 aa14.43□□□□□ -0.1
TCOF1-201ENST00000323668 GCNT6Q5T4J0 391 aa14.43□□□□□ -0.1
TCOF1-201ENST00000323668 OR4F3Q6IEY1 312 aa14.43□□□□□ -0.1
TCOF1-201ENST00000323668 CAPN13Q6MZZ7 669 aaPredicted RBP14.43□□□□□ -0.1
TCOF1-201ENST00000323668 NIPAL1Q6NVV3 410 aa14.43□□□□□ -0.1
TCOF1-201ENST00000323668 PRSS55Q6UWB4 352 aaPredicted RBP14.43□□□□□ -0.1
TCOF1-201ENST00000323668 EPHX4Q8IUS5 362 aa14.43□□□□□ -0.1
TCOF1-201ENST00000323668 MFSD2AQ8NA29 543 aa14.43□□□□□ -0.1
TCOF1-201ENST00000323668 NACC2Q96BF6 587 aa14.43□□□□□ -0.1
TCOF1-201ENST00000323668 ERLEC1Q96DZ1 483 aa14.43□□□□□ -0.1
TCOF1-201ENST00000323668 TEFMQ96QE5 360 aaKnown RBP14.43□□□□□ -0.1
TCOF1-201ENST00000323668 DUSP26Q9BV47 211 aa14.43□□□□□ -0.1
TCOF1-201ENST00000323668 CXCL16Q9H2A7 254 aa14.43□□□□□ -0.1
TCOF1-201ENST00000323668 HAS3O00219 553 aa14.43□□□□□ -0.1
TCOF1-201ENST00000323668 NR2F6P10588 404 aa14.43□□□□□ -0.1
TCOF1-201ENST00000323668 FPR1P21462 350 aa14.43□□□□□ -0.1
TCOF1-201ENST00000323668 PAICSP22234 425 aaKnown RBP14.43□□□□□ -0.1
TCOF1-201ENST00000323668 PSMA1P25786 263 aaKnown RBP14.43□□□□□ -0.1
TCOF1-201ENST00000323668 POM121L1PQ3SYA9 428 aa14.43□□□□□ -0.1
TCOF1-201ENST00000323668 ATAD3BQ5T9A4 648 aa14.43□□□□□ -0.1
TCOF1-201ENST00000323668 CCDC80Q76M96 950 aa14.43□□□□□ -0.1
TCOF1-201ENST00000323668 RAVER1Q8IY67 606 aaKnown RBP14.43□□□□□ -0.1
TCOF1-201ENST00000323668 PHACTR4Q8IZ21 702 aa14.43□□□□□ -0.1
TCOF1-201ENST00000323668 ADGRG5Q8IZF4 528 aa14.43□□□□□ -0.1
TCOF1-201ENST00000323668 TMEM102Q8N9M5 508 aaPredicted RBP14.43□□□□□ -0.1
TCOF1-201ENST00000323668 PHF21AQ96BD5 680 aa14.43□□□□□ -0.1
TCOF1-201ENST00000323668 FAM83DQ9H4H8 585 aa14.43□□□□□ -0.1
TCOF1-201ENST00000323668 TMLHEQ9NVH6 421 aa14.43□□□□□ -0.1
TCOF1-201ENST00000323668 CFAP97Q9P2B7 532 aa14.43□□□□□ -0.1
TCOF1-201ENST00000323668 CLCA2Q9UQC9 943 aa14.43□□□□□ -0.1
TCOF1-201ENST00000323668 RPLP0P05388 317 aaKnown RBP14.43□□□□□ -0.1
TCOF1-201ENST00000323668 ENGP17813 658 aa14.43□□□□□ -0.1
TCOF1-201ENST00000323668 MAGEA11P43364 429 aa14.43□□□□□ -0.1
TCOF1-201ENST00000323668 ARCN1P48444 511 aaKnown RBP14.43□□□□□ -0.1
TCOF1-201ENST00000323668 ZFAND4Q86XD8 727 aa14.43□□□□□ -0.1
TCOF1-201ENST00000323668 OR52B6Q8NGF0 335 aa14.43□□□□□ -0.1
TCOF1-201ENST00000323668 C3orf30Q96M34 536 aa14.43□□□□□ -0.1
TCOF1-201ENST00000323668 DCSTAMPQ9H295 470 aa14.43□□□□□ -0.1
TCOF1-201ENST00000323668 ARNT2Q9HBZ2 717 aa14.43□□□□□ -0.1
TCOF1-201ENST00000323668 RNF11Q9Y3C5 154 aa14.43□□□□□ -0.1
TCOF1-201ENST00000323668 PCDHGA11Q9Y5H2 935 aa14.43□□□□□ -0.1
TCOF1-201ENST00000323668 CCDC182A6NF36 153 aa14.43□□□□□ -0.1
TCOF1-201ENST00000323668 ZNF701M0R085 212 aaPredicted RBP14.43□□□□□ -0.1
TCOF1-201ENST00000323668 ACOT8O14734 319 aa14.43□□□□□ -0.1
TCOF1-201ENST00000323668 AP1G1O43747 822 aa14.43□□□□□ -0.1
TCOF1-201ENST00000323668 SERPINB7O75635 380 aa14.43□□□□□ -0.1
TCOF1-201ENST00000323668 RPN2P04844 631 aa14.43□□□□□ -0.1
TCOF1-201ENST00000323668 S100A1P23297 94 aa14.43□□□□□ -0.1
TCOF1-201ENST00000323668 CXCR2P25025 360 aa14.43□□□□□ -0.1
TCOF1-201ENST00000323668 MAGEA12P43365 314 aa14.43□□□□□ -0.1
TCOF1-201ENST00000323668 CREB5Q02930 508 aa14.43□□□□□ -0.1
TCOF1-201ENST00000323668 CES5AQ6NT32 575 aa14.43□□□□□ -0.1
TCOF1-201ENST00000323668 FADS2P1A8MWK0 482 aa14.42□□□□□ -0.1
TCOF1-201ENST00000323668 PRR23D1E9PI22 279 aaPredicted RBP14.42□□□□□ -0.1
TCOF1-201ENST00000323668 HPRP00739 348 aa14.42□□□□□ -0.1
TCOF1-201ENST00000323668 PRR23D2P0DMB1 279 aaPredicted RBP14.42□□□□□ -0.1
TCOF1-201ENST00000323668 NR2F1P10589 423 aa14.42□□□□□ -0.1
TCOF1-201ENST00000323668 ZNF26P17031 533 aaPredicted RBP14.42□□□□□ -0.1
TCOF1-201ENST00000323668 FOXA1P55317 472 aa14.42□□□□□ -0.1
TCOF1-201ENST00000323668 C2orf80Q0P641 193 aa14.42□□□□□ -0.1
TCOF1-201ENST00000323668 NFATC3Q12968 1075 aa14.42□□□□□ -0.1
TCOF1-201ENST00000323668 TAB1Q15750 504 aa14.42□□□□□ -0.1
TCOF1-201ENST00000323668 IFI44LQ53G44 452 aa14.42□□□□□ -0.1
TCOF1-201ENST00000323668 LRRTM3Q86VH5 581 aa14.42□□□□□ -0.1
TCOF1-201ENST00000323668 AGPAT4Q9NRZ5 378 aa14.42□□□□□ -0.1
TCOF1-201ENST00000323668 FBP2O00757 339 aa14.42□□□□□ -0.1
TCOF1-201ENST00000323668 TFECO14948 347 aaPredicted RBP14.42□□□□□ -0.1
TCOF1-201ENST00000323668 GNAO1P09471 354 aa14.42□□□□□ -0.1
TCOF1-201ENST00000323668 ANXA8P13928 327 aa14.42□□□□□ -0.1
TCOF1-201ENST00000323668 PTX3P26022 381 aaPredicted RBP14.42□□□□□ -0.1
TCOF1-201ENST00000323668 BCAP31P51572 246 aa14.42□□□□□ -0.1
TCOF1-201ENST00000323668 SEMG2Q02383 582 aa14.42□□□□□ -0.1
TCOF1-201ENST00000323668 CHRNA6Q15825 494 aa14.42□□□□□ -0.1
TCOF1-201ENST00000323668 TIGD6Q17RP2 521 aa14.42□□□□□ -0.1
TCOF1-201ENST00000323668 FRG2Q64ET8 278 aa14.42□□□□□ -0.1
TCOF1-201ENST00000323668 SHKBP1Q8TBC3 707 aa14.42□□□□□ -0.1
TCOF1-201ENST00000323668 FUBP1Q96AE4 644 aaKnown RBP14.42□□□□□ -0.1
TCOF1-201ENST00000323668 FRG2BQ96QU4 278 aa14.42□□□□□ -0.1
TCOF1-201ENST00000323668 OSBPL10Q9BXB5 764 aa14.42□□□□□ -0.1
TCOF1-201ENST00000323668 OR2AG2A6NM03 316 aa14.42□□□□□ -0.1
TCOF1-201ENST00000323668 ARVCFO00192 962 aa14.42□□□□□ -0.1
TCOF1-201ENST00000323668 VILLO15195 856 aa14.42□□□□□ -0.1
TCOF1-201ENST00000323668 XPNPEP2O43895 674 aa14.42□□□□□ -0.1
TCOF1-201ENST00000323668 DNAJB5O75953 348 aa14.42□□□□□ -0.1
TCOF1-201ENST00000323668 DIRAS1O95057 198 aa14.42□□□□□ -0.1
TCOF1-201ENST00000323668 IFNW1P05000 195 aa14.42□□□□□ -0.1
TCOF1-201ENST00000323668 IMPDH2P12268 514 aa14.42□□□□□ -0.1
TCOF1-201ENST00000323668 RING1Q06587 406 aa14.42□□□□□ -0.1
TCOF1-201ENST00000323668 C11orf91Q3C1V1 193 aa14.42□□□□□ -0.1
TCOF1-201ENST00000323668 CEP78Q5JTW2 689 aa14.42□□□□□ -0.1
TCOF1-201ENST00000323668 PAGE3Q5JUK9 113 aa14.42□□□□□ -0.1
TCOF1-201ENST00000323668 RGMBQ6NW40 437 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms