RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 FFAR3O14843 346 aa17.5■□□□□ 0.39
PRKCB-202ENST00000321728 MUSKO15146 869 aa17.5■□□□□ 0.39
PRKCB-202ENST00000321728 GPR42O15529 346 aa17.5■□□□□ 0.39
PRKCB-202ENST00000321728 BMP1P13497 986 aa17.5■□□□□ 0.39
PRKCB-202ENST00000321728 PPP3CCP48454 512 aa17.5■□□□□ 0.39
PRKCB-202ENST00000321728 GDPD3Q7L5L3 318 aa17.5■□□□□ 0.39
PRKCB-202ENST00000321728 AMER2Q8N7J2 671 aa17.5■□□□□ 0.39
PRKCB-202ENST00000321728 GPRC5AQ8NFJ5 357 aa17.5■□□□□ 0.39
PRKCB-202ENST00000321728 PPP3R2Q96LZ3 170 aa17.5■□□□□ 0.39
PRKCB-202ENST00000321728 C1orf109Q9NX04 203 aa17.5■□□□□ 0.39
PRKCB-202ENST00000321728 FNIP2Q9P278 1114 aa17.5■□□□□ 0.39
PRKCB-202ENST00000321728 ABCG2Q9UNQ0 655 aa17.5■□□□□ 0.39
PRKCB-202ENST00000321728 LOC100506127A0A0U1RQW1 187 aa17.5■□□□□ 0.39
PRKCB-202ENST00000321728 A0A1W2PQH9 124 aa17.5■□□□□ 0.39
PRKCB-202ENST00000321728 CXCL11O14625 94 aa17.5■□□□□ 0.39
PRKCB-202ENST00000321728 PKMP14618 531 aaKnown RBP17.5■□□□□ 0.39
PRKCB-202ENST00000321728 GADD45AP24522 165 aa17.5■□□□□ 0.39
PRKCB-202ENST00000321728 SGO1Q5FBB7 561 aa17.5■□□□□ 0.39
PRKCB-202ENST00000321728 TMC5Q6UXY8 1006 aa17.5■□□□□ 0.39
PRKCB-202ENST00000321728 ELMOD1Q8N336 334 aa17.5■□□□□ 0.39
PRKCB-202ENST00000321728 LIX1Q8N485 282 aa17.5■□□□□ 0.39
PRKCB-202ENST00000321728 SERPINB11Q96P15 392 aa17.5■□□□□ 0.39
PRKCB-202ENST00000321728 CEP44Q9C0F1 390 aa17.5■□□□□ 0.39
PRKCB-202ENST00000321728 PDP1Q9P0J1 537 aaPredicted RBP17.5■□□□□ 0.39
PRKCB-202ENST00000321728 ZNF221Q9UK13 617 aa17.5■□□□□ 0.39
PRKCB-202ENST00000321728 RNF6Q9Y252 685 aa17.5■□□□□ 0.39
PRKCB-202ENST00000321728 E5RI56 91 aa17.49■□□□□ 0.39
PRKCB-202ENST00000321728 OR7A17O14581 309 aa17.49■□□□□ 0.39
PRKCB-202ENST00000321728 APOA1P02647 267 aa17.49■□□□□ 0.39
PRKCB-202ENST00000321728 CTSHP09668 335 aa17.49■□□□□ 0.39
PRKCB-202ENST00000321728 HMGCS1Q01581 520 aa17.49■□□□□ 0.39
PRKCB-202ENST00000321728 CAMK2BQ13554 666 aa17.49■□□□□ 0.39
PRKCB-202ENST00000321728 GTF2H2Q13888 395 aa17.49■□□□□ 0.39
PRKCB-202ENST00000321728 GTF2H2CQ6P1K8 395 aa17.49■□□□□ 0.39
PRKCB-202ENST00000321728 AFTPHQ6ULP2 937 aa17.49■□□□□ 0.39
PRKCB-202ENST00000321728 MILR1Q7Z6M3 343 aa17.49■□□□□ 0.39
PRKCB-202ENST00000321728 LRRTM3Q86VH5 581 aa17.49■□□□□ 0.39
PRKCB-202ENST00000321728 CIR1Q86X95 450 aaPredicted RBP17.49■□□□□ 0.39
PRKCB-202ENST00000321728 ATG16L2Q8NAA4 619 aa17.49■□□□□ 0.39
PRKCB-202ENST00000321728 RMDN1Q96DB5 314 aa17.49■□□□□ 0.39
PRKCB-202ENST00000321728 MIOSQ9NXC5 875 aa17.49■□□□□ 0.39
PRKCB-202ENST00000321728 TBC1D14Q9P2M4 693 aa17.49■□□□□ 0.39
PRKCB-202ENST00000321728 TMA7Q9Y2S6 64 aaKnown RBP17.49■□□□□ 0.39
PRKCB-202ENST00000321728 PDZK1P1A8MUH7 402 aa17.49■□□□□ 0.39
PRKCB-202ENST00000321728 hCG_2039718K7EN88 272 aa17.49■□□□□ 0.39
PRKCB-202ENST00000321728 HAT1O14929 419 aa17.49■□□□□ 0.39
PRKCB-202ENST00000321728 PER2O15055 1255 aa17.49■□□□□ 0.39
PRKCB-202ENST00000321728 IL6P05231 212 aa17.49■□□□□ 0.39
PRKCB-202ENST00000321728 PBX3P40426 434 aa17.49■□□□□ 0.39
PRKCB-202ENST00000321728 DEFA1P59665 94 aa17.49■□□□□ 0.39
PRKCB-202ENST00000321728 DEFA3P59666 94 aa17.49■□□□□ 0.39
PRKCB-202ENST00000321728 ZNF45Q02386 682 aa17.49■□□□□ 0.39
PRKCB-202ENST00000321728 DUSP28Q4G0W2 176 aa17.49■□□□□ 0.39
PRKCB-202ENST00000321728 PRSS36Q5K4E3 855 aa17.49■□□□□ 0.39
PRKCB-202ENST00000321728 SLX4IPQ5VYV7 408 aa17.49■□□□□ 0.39
PRKCB-202ENST00000321728 KDM4DQ6B0I6 523 aa17.49■□□□□ 0.39
PRKCB-202ENST00000321728 OR2T5Q6IEZ7 315 aa17.49■□□□□ 0.39
PRKCB-202ENST00000321728 FAM171BQ6P995 826 aa17.49■□□□□ 0.39
PRKCB-202ENST00000321728 TSPYL5Q86VY4 417 aaPredicted RBP17.49■□□□□ 0.39
PRKCB-202ENST00000321728 OR2T29Q8NH02 315 aa17.49■□□□□ 0.39
PRKCB-202ENST00000321728 IPCEF1Q8WWN9 437 aaPredicted RBP17.49■□□□□ 0.39
PRKCB-202ENST00000321728 C1orf74Q96LT6 269 aa17.49■□□□□ 0.39
PRKCB-202ENST00000321728 OR2B2Q9GZK3 357 aa17.49■□□□□ 0.39
PRKCB-202ENST00000321728 RNF38Q9H0F5 515 aa17.49■□□□□ 0.39
PRKCB-202ENST00000321728 IPPKQ9H8X2 491 aa17.49■□□□□ 0.39
PRKCB-202ENST00000321728 TRPV5Q9NQA5 729 aa17.49■□□□□ 0.39
PRKCB-202ENST00000321728 NLE1Q9NVX2 485 aaPredicted RBP17.49■□□□□ 0.39
PRKCB-202ENST00000321728 TMEM248Q9NWD8 314 aa17.49■□□□□ 0.39
PRKCB-202ENST00000321728 ERVW-1Q9UQF0 538 aa17.49■□□□□ 0.39
PRKCB-202ENST00000321728 PCDHGA3Q9Y5H0 932 aa17.49■□□□□ 0.39
PRKCB-202ENST00000321728 SPO11Q9Y5K1 396 aa17.49■□□□□ 0.39
PRKCB-202ENST00000321728 FAM172BPA6NC97 362 aa17.48■□□□□ 0.39
PRKCB-202ENST00000321728 F8W810 466 aa17.48■□□□□ 0.39
PRKCB-202ENST00000321728 RAMP2O60895 175 aa17.48■□□□□ 0.39
PRKCB-202ENST00000321728 MED26O95402 600 aa17.48■□□□□ 0.39
PRKCB-202ENST00000321728 ODC1P11926 461 aa17.48■□□□□ 0.39
PRKCB-202ENST00000321728 UGT2B10P36537 528 aa17.48■□□□□ 0.39
PRKCB-202ENST00000321728 CTSKP43235 329 aa17.48■□□□□ 0.39
PRKCB-202ENST00000321728 KRR1Q13601 381 aaKnown RBP17.48■□□□□ 0.39
PRKCB-202ENST00000321728 AGAP6Q5VW22 663 aa17.48■□□□□ 0.39
PRKCB-202ENST00000321728 METTL23Q86XA0 190 aa17.48■□□□□ 0.39
PRKCB-202ENST00000321728 SLC16A10Q8TF71 515 aa17.48■□□□□ 0.39
PRKCB-202ENST00000321728 SLC10A4Q96EP9 437 aa17.48■□□□□ 0.39
PRKCB-202ENST00000321728 AGAP4Q96P64 663 aa17.48■□□□□ 0.39
PRKCB-202ENST00000321728 ACBD6Q9BR61 282 aa17.48■□□□□ 0.39
PRKCB-202ENST00000321728 KRT84Q9NSB2 600 aa17.48■□□□□ 0.39
PRKCB-202ENST00000321728 NDRG4Q9ULP0 352 aaKnown RBP17.48■□□□□ 0.39
PRKCB-202ENST00000321728 N6AMT1Q9Y5N5 214 aa17.48■□□□□ 0.39
PRKCB-202ENST00000321728 FAM220BPB1ANY3 271 aa17.48■□□□□ 0.39
PRKCB-202ENST00000321728 AREL1O15033 823 aa17.48■□□□□ 0.39
PRKCB-202ENST00000321728 RGS14O43566 566 aa17.48■□□□□ 0.39
PRKCB-202ENST00000321728 TSPAN3O60637 253 aa17.48■□□□□ 0.39
PRKCB-202ENST00000321728 SERPINF2P08697 491 aa17.48■□□□□ 0.39
PRKCB-202ENST00000321728 ACVRL1P37023 503 aa17.48■□□□□ 0.39
PRKCB-202ENST00000321728 MRPS15P82914 257 aaKnown RBP17.48■□□□□ 0.39
PRKCB-202ENST00000321728 CREMQ03060 361 aa17.48■□□□□ 0.39
PRKCB-202ENST00000321728 MS4A13Q5J8X5 152 aa17.48■□□□□ 0.39
PRKCB-202ENST00000321728 CACHD1Q5VU97 1274 aa17.48■□□□□ 0.39
PRKCB-202ENST00000321728 KIAA1614Q5VZ46 1190 aa17.48■□□□□ 0.39
PRKCB-202ENST00000321728 ATG9BQ674R7 924 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms