RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 ZNF599Q96NL3 588 aa13.9□□□□□ -0.18
PABPC1-201ENST00000318607 GFM1Q96RP9 751 aaKnown RBP13.9□□□□□ -0.18
PABPC1-201ENST00000318607 TMEM246Q9BRR3 403 aa13.9□□□□□ -0.18
PABPC1-201ENST00000318607 AARSD1Q9BTE6 412 aaKnown RBP13.9□□□□□ -0.18
PABPC1-201ENST00000318607 OSBPL10Q9BXB5 764 aa13.9□□□□□ -0.18
PABPC1-201ENST00000318607 GPN2Q9H9Y4 310 aaPredicted RBP13.9□□□□□ -0.18
PABPC1-201ENST00000318607 KLHL20Q9Y2M5 609 aa13.9□□□□□ -0.18
PABPC1-201ENST00000318607 SYNDIG1LA6NDD5 238 aa13.9□□□□□ -0.18
PABPC1-201ENST00000318607 FAM47E-STBD1D6RA91 191 aa13.9□□□□□ -0.18
PABPC1-201ENST00000318607 M0QZ92 97 aa13.9□□□□□ -0.18
PABPC1-201ENST00000318607 CPNE3O75131 537 aaKnown RBP13.9□□□□□ -0.18
PABPC1-201ENST00000318607 EEDO75530 441 aaKnown RBP13.9□□□□□ -0.18
PABPC1-201ENST00000318607 UMPSP11172 480 aa13.9□□□□□ -0.18
PABPC1-201ENST00000318607 S100A3P33764 101 aa13.9□□□□□ -0.18
PABPC1-201ENST00000318607 OR1G1P47890 313 aa13.9□□□□□ -0.18
PABPC1-201ENST00000318607 LHX1P48742 406 aa13.9□□□□□ -0.18
PABPC1-201ENST00000318607 OR2B6P58173 313 aa13.9□□□□□ -0.18
PABPC1-201ENST00000318607 TIGD6Q17RP2 521 aa13.9□□□□□ -0.18
PABPC1-201ENST00000318607 NXNL2Q5VZ03 156 aa13.9□□□□□ -0.18
PABPC1-201ENST00000318607 DLEU7Q6UYE1 221 aa13.9□□□□□ -0.18
PABPC1-201ENST00000318607 CAMKK1Q8N5S9 505 aa13.9□□□□□ -0.18
PABPC1-201ENST00000318607 OR6Q1Q8NGQ2 317 aa13.9□□□□□ -0.18
PABPC1-201ENST00000318607 ZNF486Q96H40 463 aaPredicted RBP13.9□□□□□ -0.18
PABPC1-201ENST00000318607 BOCQ9BWV1 1114 aa13.9□□□□□ -0.18
PABPC1-201ENST00000318607 CIPCQ9C0C6 399 aa13.9□□□□□ -0.18
PABPC1-201ENST00000318607 POLR1EQ9GZS1 481 aaKnown RBP13.9□□□□□ -0.18
PABPC1-201ENST00000318607 ATG10Q9H0Y0 220 aa13.9□□□□□ -0.18
PABPC1-201ENST00000318607 TLR8Q9NR97 1041 aaKnown RBP13.9□□□□□ -0.18
PABPC1-201ENST00000318607 IMPAD1Q9NX62 359 aa13.9□□□□□ -0.18
PABPC1-201ENST00000318607 RAPGEFL1Q9UHV5 662 aa13.9□□□□□ -0.18
PABPC1-201ENST00000318607 PCTPQ9UKL6 214 aa13.9□□□□□ -0.18
PABPC1-201ENST00000318607 BTBD3Q9Y2F9 522 aa13.9□□□□□ -0.18
PABPC1-201ENST00000318607 ARID1AO14497 2285 aa13.9□□□□□ -0.18
PABPC1-201ENST00000318607 FAM92AA1XBS5 289 aa13.89□□□□□ -0.19
PABPC1-201ENST00000318607 ARL5CA6NH57 179 aa13.89□□□□□ -0.19
PABPC1-201ENST00000318607 TMEM88BA6NKF7 163 aa13.89□□□□□ -0.19
PABPC1-201ENST00000318607 TRIM64CA6NLI5 447 aa13.89□□□□□ -0.19
PABPC1-201ENST00000318607 H0YAE9 185 aa13.89□□□□□ -0.19
PABPC1-201ENST00000318607 RPP40O75818 363 aaKnown RBP13.89□□□□□ -0.19
PABPC1-201ENST00000318607 CNMDO75829 334 aa13.89□□□□□ -0.19
PABPC1-201ENST00000318607 CKMT1AP12532 417 aa13.89□□□□□ -0.19
PABPC1-201ENST00000318607 TACR1P25103 407 aa13.89□□□□□ -0.19
PABPC1-201ENST00000318607 PSMD8P48556 350 aa13.89□□□□□ -0.19
PABPC1-201ENST00000318607 ZNF404Q494X3 552 aa13.89□□□□□ -0.19
PABPC1-201ENST00000318607 HMGN2P46Q86SG4 172 aa13.89□□□□□ -0.19
PABPC1-201ENST00000318607 LMNTD1Q8N9Z9 388 aa13.89□□□□□ -0.19
PABPC1-201ENST00000318607 GPR156Q8NFN8 814 aa13.89□□□□□ -0.19
PABPC1-201ENST00000318607 PPTC7Q8NI37 304 aa13.89□□□□□ -0.19
PABPC1-201ENST00000318607 S100ZQ8WXG8 99 aa13.89□□□□□ -0.19
PABPC1-201ENST00000318607 DOK1Q99704 481 aa13.89□□□□□ -0.19
PABPC1-201ENST00000318607 CNPPD1Q9BV87 410 aa13.89□□□□□ -0.19
PABPC1-201ENST00000318607 MFSD1Q9H3U5 465 aa13.89□□□□□ -0.19
PABPC1-201ENST00000318607 NT5C1B-RDH14C9J2C7 533 aa13.89□□□□□ -0.19
PABPC1-201ENST00000318607 RFXAPO00287 272 aa13.89□□□□□ -0.19
PABPC1-201ENST00000318607 KERAO60938 352 aa13.89□□□□□ -0.19
PABPC1-201ENST00000318607 GPR32O75388 356 aa13.89□□□□□ -0.19
PABPC1-201ENST00000318607 SLC25A27O95847 323 aa13.89□□□□□ -0.19
PABPC1-201ENST00000318607 CAPNS1P04632 268 aa13.89□□□□□ -0.19
PABPC1-201ENST00000318607 CCDC159P0C7I6 412 aa13.89□□□□□ -0.19
PABPC1-201ENST00000318607 ATXN8OSP0DMR3 200 aa13.89□□□□□ -0.19
PABPC1-201ENST00000318607 HTR1EP28566 365 aa13.89□□□□□ -0.19
PABPC1-201ENST00000318607 CYP2C18P33260 490 aa13.89□□□□□ -0.19
PABPC1-201ENST00000318607 CDKN2CP42773 168 aa13.89□□□□□ -0.19
PABPC1-201ENST00000318607 HSPA14Q0VDF9 509 aa13.89□□□□□ -0.19
PABPC1-201ENST00000318607 ZFP69Q49AA0 526 aa13.89□□□□□ -0.19
PABPC1-201ENST00000318607 PPP2R2DQ66LE6 453 aa13.89□□□□□ -0.19
PABPC1-201ENST00000318607 LAIR2Q6ISS4 152 aa13.89□□□□□ -0.19
PABPC1-201ENST00000318607 HACD2Q6Y1H2 254 aa13.89□□□□□ -0.19
PABPC1-201ENST00000318607 USP51Q70EK9 711 aa13.89□□□□□ -0.19
PABPC1-201ENST00000318607 CADM2Q8N3J6 435 aa13.89□□□□□ -0.19
PABPC1-201ENST00000318607 BPIFB1Q8TDL5 484 aa13.89□□□□□ -0.19
PABPC1-201ENST00000318607 MUL1Q969V5 352 aa13.89□□□□□ -0.19
PABPC1-201ENST00000318607 L3HYPDHQ96EM0 354 aa13.89□□□□□ -0.19
PABPC1-201ENST00000318607 CEP295NLQ96MC4 621 aa13.89□□□□□ -0.19
PABPC1-201ENST00000318607 PANX1Q96RD7 426 aa13.89□□□□□ -0.19
PABPC1-201ENST00000318607 NMRK2Q9NPI5 230 aa13.89□□□□□ -0.19
PABPC1-201ENST00000318607 RAD18Q9NS91 495 aa13.89□□□□□ -0.19
PABPC1-201ENST00000318607 ANKMY1Q9P2S6 941 aa13.89□□□□□ -0.19
PABPC1-201ENST00000318607 DNMT3BQ9UBC3 853 aaKnown RBP13.89□□□□□ -0.19
PABPC1-201ENST00000318607 NOD1Q9Y239 953 aa13.89□□□□□ -0.19
PABPC1-201ENST00000318607 ANKRD34BA5PLL1 514 aa13.89□□□□□ -0.19
PABPC1-201ENST00000318607 RFXANKO14593 260 aa13.89□□□□□ -0.19
PABPC1-201ENST00000318607 TLL1O43897 1013 aa13.89□□□□□ -0.19
PABPC1-201ENST00000318607 MYCP01106 439 aaPredicted RBP13.89□□□□□ -0.19
PABPC1-201ENST00000318607 PKMP14618 531 aaKnown RBP13.89□□□□□ -0.19
PABPC1-201ENST00000318607 GGT1P19440 569 aa13.89□□□□□ -0.19
PABPC1-201ENST00000318607 TGM1P22735 817 aa13.89□□□□□ -0.19
PABPC1-201ENST00000318607 KRT20P35900 424 aa13.89□□□□□ -0.19
PABPC1-201ENST00000318607 STC1P52823 247 aa13.89□□□□□ -0.19
PABPC1-201ENST00000318607 GTF2H2Q13888 395 aa13.89□□□□□ -0.19
PABPC1-201ENST00000318607 GANABQ14697 944 aaKnown RBP13.89□□□□□ -0.19
PABPC1-201ENST00000318607 LRIT3Q3SXY7 679 aa13.89□□□□□ -0.19
PABPC1-201ENST00000318607 CACHD1Q5VU97 1274 aa13.89□□□□□ -0.19
PABPC1-201ENST00000318607 PM20D1Q6GTS8 502 aa13.89□□□□□ -0.19
PABPC1-201ENST00000318607 GTF2H2CQ6P1K8 395 aa13.89□□□□□ -0.19
PABPC1-201ENST00000318607 CXCL17Q6UXB2 119 aa13.89□□□□□ -0.19
PABPC1-201ENST00000318607 GOLGA7Q7Z5G4 137 aa13.89□□□□□ -0.19
PABPC1-201ENST00000318607 ZFAND4Q86XD8 727 aa13.89□□□□□ -0.19
PABPC1-201ENST00000318607 TOP6BLQ8N6T0 577 aa13.89□□□□□ -0.19
PABPC1-201ENST00000318607 SELENOMQ8WWX9 145 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms