RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 FXNQ16595 210 aa16.83■□□□□ 0.29
SCAMP4-201ENST00000316097 C6orf183Q5T699 404 aa16.83■□□□□ 0.29
SCAMP4-201ENST00000316097 Q6ZNB5 142 aa16.83■□□□□ 0.29
SCAMP4-201ENST00000316097 OR6K2Q8NGY2 324 aa16.83■□□□□ 0.29
SCAMP4-201ENST00000316097 GLMNQ92990 594 aa16.83■□□□□ 0.29
SCAMP4-201ENST00000316097 FEM1AQ9BSK4 669 aa16.83■□□□□ 0.29
SCAMP4-201ENST00000316097 EMILIN2Q9BXX0 1053 aa16.83■□□□□ 0.29
SCAMP4-201ENST00000316097 MFSD1Q9H3U5 465 aa16.83■□□□□ 0.29
SCAMP4-201ENST00000316097 CARS2Q9HA77 564 aaKnown RBP16.83■□□□□ 0.29
SCAMP4-201ENST00000316097 FCF1Q9Y324 198 aaKnown RBP16.83■□□□□ 0.29
SCAMP4-201ENST00000316097 LOC285095A0A1B0GVY8 99 aa16.83■□□□□ 0.28
SCAMP4-201ENST00000316097 ZNF99A8MXY4 864 aaPredicted RBP16.83■□□□□ 0.28
SCAMP4-201ENST00000316097 SLC1A7O00341 560 aa16.83■□□□□ 0.28
SCAMP4-201ENST00000316097 HPRP00739 348 aa16.83■□□□□ 0.28
SCAMP4-201ENST00000316097 PRR35P0CG20 571 aa16.83■□□□□ 0.28
SCAMP4-201ENST00000316097 ZNF37AP17032 561 aaPredicted RBP16.83■□□□□ 0.28
SCAMP4-201ENST00000316097 PCMT1P22061 227 aa16.83■□□□□ 0.28
SCAMP4-201ENST00000316097 TIAL1Q01085 375 aaKnown RBP eCLIP16.83■□□□□ 0.28
SCAMP4-201ENST00000316097 TMEM236Q5W0B7 351 aa16.83■□□□□ 0.28
SCAMP4-201ENST00000316097 PSRC1Q6PGN9 363 aaPredicted RBP16.83■□□□□ 0.28
SCAMP4-201ENST00000316097 CCDC149Q6ZUS6 474 aa16.83■□□□□ 0.28
SCAMP4-201ENST00000316097 SLC22A16Q86VW1 577 aa16.83■□□□□ 0.28
SCAMP4-201ENST00000316097 FBXO30Q8TB52 745 aa16.83■□□□□ 0.28
SCAMP4-201ENST00000316097 FATE1Q969F0 183 aa16.83■□□□□ 0.28
SCAMP4-201ENST00000316097 TADA1Q96BN2 335 aa16.83■□□□□ 0.28
SCAMP4-201ENST00000316097 ACOX2Q99424 681 aa16.83■□□□□ 0.28
SCAMP4-201ENST00000316097 ARNT2Q9HBZ2 717 aa16.83■□□□□ 0.28
SCAMP4-201ENST00000316097 ASAH2Q9NR71 780 aa16.83■□□□□ 0.28
SCAMP4-201ENST00000316097 ANKMY1Q9P2S6 941 aa16.83■□□□□ 0.28
SCAMP4-201ENST00000316097 KLQ9UEF7 1012 aa16.83■□□□□ 0.28
SCAMP4-201ENST00000316097 SELENBP1Q13228 472 aa16.83■□□□□ 0.28
SCAMP4-201ENST00000316097 CDH18Q13634 790 aa16.83■□□□□ 0.28
SCAMP4-201ENST00000316097 TEAD2Q15562 447 aa16.83■□□□□ 0.28
SCAMP4-201ENST00000316097 ADPRMQ3LIE5 342 aa16.83■□□□□ 0.28
SCAMP4-201ENST00000316097 ADCK1Q86TW2 530 aa16.83■□□□□ 0.28
SCAMP4-201ENST00000316097 FBXO39Q8N4B4 442 aa16.83■□□□□ 0.28
SCAMP4-201ENST00000316097 SP7Q8TDD2 431 aaPredicted RBP16.83■□□□□ 0.28
SCAMP4-201ENST00000316097 HERVK_113Q902F9 699 aa16.83■□□□□ 0.28
SCAMP4-201ENST00000316097 ISG20Q96AZ6 181 aaKnown RBP16.83■□□□□ 0.28
SCAMP4-201ENST00000316097 TBATAQ96M53 351 aa16.83■□□□□ 0.28
SCAMP4-201ENST00000316097 SIAEQ9HAT2 523 aa16.83■□□□□ 0.28
SCAMP4-201ENST00000316097 SCHIP1Q9P0W5 487 aaPredicted RBP16.83■□□□□ 0.28
SCAMP4-201ENST00000316097 ALPK3Q96L96 1907 aa16.82■□□□□ 0.28
SCAMP4-201ENST00000316097 LEFTY2O00292 366 aa16.82■□□□□ 0.28
SCAMP4-201ENST00000316097 GABARAPO95166 117 aa16.82■□□□□ 0.28
SCAMP4-201ENST00000316097 CST1P01037 141 aa16.82■□□□□ 0.28
SCAMP4-201ENST00000316097 VBP1P61758 197 aa16.82■□□□□ 0.28
SCAMP4-201ENST00000316097 CREMQ03060 361 aa16.82■□□□□ 0.28
SCAMP4-201ENST00000316097 ATXN7L2Q5T6C5 722 aaPredicted RBP16.82■□□□□ 0.28
SCAMP4-201ENST00000316097 SPESP1Q6UW49 350 aa16.82■□□□□ 0.28
SCAMP4-201ENST00000316097 GALNT7Q86SF2 657 aa16.82■□□□□ 0.28
SCAMP4-201ENST00000316097 ELMOD1Q8N336 334 aa16.82■□□□□ 0.28
SCAMP4-201ENST00000316097 PIK3C3Q8NEB9 887 aa16.82■□□□□ 0.28
SCAMP4-201ENST00000316097 OR2T11Q8NH01 316 aa16.82■□□□□ 0.28
SCAMP4-201ENST00000316097 FIG4Q92562 907 aa16.82■□□□□ 0.28
SCAMP4-201ENST00000316097 RDH12Q96NR8 316 aa16.82■□□□□ 0.28
SCAMP4-201ENST00000316097 PSKH2Q96QS6 385 aa16.82■□□□□ 0.28
SCAMP4-201ENST00000316097 OSBPL10Q9BXB5 764 aa16.82■□□□□ 0.28
SCAMP4-201ENST00000316097 BRINP2Q9C0B6 783 aa16.82■□□□□ 0.28
SCAMP4-201ENST00000316097 SCUBE2Q9NQ36 999 aa16.82■□□□□ 0.28
SCAMP4-201ENST00000316097 ZNF229Q9UJW7 825 aa16.82■□□□□ 0.28
SCAMP4-201ENST00000316097 STOML2Q9UJZ1 356 aa16.82■□□□□ 0.28
SCAMP4-201ENST00000316097 FAM234BA2RU67 622 aa16.82■□□□□ 0.28
SCAMP4-201ENST00000316097 NCF1BA6NI72 391 aaPredicted RBP16.82■□□□□ 0.28
SCAMP4-201ENST00000316097 NCF1CA8MVU1 366 aaPredicted RBP16.82■□□□□ 0.28
SCAMP4-201ENST00000316097 GNGT2O14610 69 aa16.82■□□□□ 0.28
SCAMP4-201ENST00000316097 SERPINF2P08697 491 aa16.82■□□□□ 0.28
SCAMP4-201ENST00000316097 NCF1P14598 390 aaPredicted RBP16.82■□□□□ 0.28
SCAMP4-201ENST00000316097 FSHRP23945 695 aa16.82■□□□□ 0.28
SCAMP4-201ENST00000316097 DGUOKQ16854 277 aa16.82■□□□□ 0.28
SCAMP4-201ENST00000316097 ANKS6Q68DC2 871 aa16.82■□□□□ 0.28
SCAMP4-201ENST00000316097 ENPP6Q6UWR7 440 aa16.82■□□□□ 0.28
SCAMP4-201ENST00000316097 CHST9Q7L1S5 443 aa16.82■□□□□ 0.28
SCAMP4-201ENST00000316097 FNDC5Q8NAU1 212 aa16.82■□□□□ 0.28
SCAMP4-201ENST00000316097 OR13C4Q8NGS5 318 aa16.82■□□□□ 0.28
SCAMP4-201ENST00000316097 NUDT8Q8WV74 236 aa16.82■□□□□ 0.28
SCAMP4-201ENST00000316097 EFHD2Q96C19 240 aaPredicted RBP16.82■□□□□ 0.28
SCAMP4-201ENST00000316097 MGME1Q9BQP7 344 aa16.82■□□□□ 0.28
SCAMP4-201ENST00000316097 ALOXE3Q9BYJ1 711 aa16.82■□□□□ 0.28
SCAMP4-201ENST00000316097 UTS2RQ9UKP6 389 aa16.82■□□□□ 0.28
SCAMP4-201ENST00000316097 RNF112Q9ULX5 631 aa16.82■□□□□ 0.28
SCAMP4-201ENST00000316097 LDB2O43679 373 aa16.81■□□□□ 0.28
SCAMP4-201ENST00000316097 XPNPEP2O43895 674 aa16.81■□□□□ 0.28
SCAMP4-201ENST00000316097 PAPSS2O95340 614 aaPredicted RBP16.81■□□□□ 0.28
SCAMP4-201ENST00000316097 CA3P07451 260 aa16.81■□□□□ 0.28
SCAMP4-201ENST00000316097 PRSS56P0CW18 603 aa16.81■□□□□ 0.28
SCAMP4-201ENST00000316097 EMX1Q04741 257 aaPredicted RBP16.81■□□□□ 0.28
SCAMP4-201ENST00000316097 GRIK2Q13002 908 aa16.81■□□□□ 0.28
SCAMP4-201ENST00000316097 CARTPTQ16568 116 aa16.81■□□□□ 0.28
SCAMP4-201ENST00000316097 SYVN1Q86TM6 617 aa16.81■□□□□ 0.28
SCAMP4-201ENST00000316097 DCBLD1Q8N8Z6 715 aa16.81■□□□□ 0.28
SCAMP4-201ENST00000316097 PROKR1Q8TCW9 393 aa16.81■□□□□ 0.28
SCAMP4-201ENST00000316097 FAR1Q8WVX9 515 aa16.81■□□□□ 0.28
SCAMP4-201ENST00000316097 RMDN1Q96DB5 314 aa16.81■□□□□ 0.28
SCAMP4-201ENST00000316097 TM6SF2Q9BZW4 377 aa16.81■□□□□ 0.28
SCAMP4-201ENST00000316097 ERVK-11Q9UQG0 969 aa16.81■□□□□ 0.28
SCAMP4-201ENST00000316097 SYCE1LA8MT33 242 aa16.81■□□□□ 0.28
SCAMP4-201ENST00000316097 SLC22A1O15245 554 aa16.81■□□□□ 0.28
SCAMP4-201ENST00000316097 SMAD6O43541 496 aaKnown RBP16.81■□□□□ 0.28
SCAMP4-201ENST00000316097 HS6ST1O60243 411 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms