RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 KCTD3Q9Y597 815 aa8.09□□□□□ -1.11
CHD6-201ENST00000309279 SPTY2D1-AS1A0A0U1RR47 76 aa8.08□□□□□ -1.12
CHD6-201ENST00000309279 A0A1B0GVT2 93 aa8.08□□□□□ -1.12
CHD6-201ENST00000309279 HEATR9A2RTY3 570 aa8.08□□□□□ -1.12
CHD6-201ENST00000309279 SDR42E2A6NKP2 422 aa8.08□□□□□ -1.12
CHD6-201ENST00000309279 GOLGA8CPA6NN73 597 aa8.08□□□□□ -1.12
CHD6-201ENST00000309279 AGAP14A8MT82 685 aa8.08□□□□□ -1.12
CHD6-201ENST00000309279 GPR89AB7ZAQ6 455 aa8.08□□□□□ -1.12
CHD6-201ENST00000309279 GAPDHSO14556 408 aaPredicted RBP8.08□□□□□ -1.12
CHD6-201ENST00000309279 ARHGAP33O14559 1287 aa8.08□□□□□ -1.12
CHD6-201ENST00000309279 STX7O15400 261 aaKnown RBP8.08□□□□□ -1.12
CHD6-201ENST00000309279 BUD23O43709 281 aaKnown RBP8.08□□□□□ -1.12
CHD6-201ENST00000309279 PEX11AO75192 247 aa8.08□□□□□ -1.12
CHD6-201ENST00000309279 AVILO75366 819 aa8.08□□□□□ -1.12
CHD6-201ENST00000309279 ALBP02768 609 aa8.08□□□□□ -1.12
CHD6-201ENST00000309279 CFIP05156 583 aa8.08□□□□□ -1.12
CHD6-201ENST00000309279 PCCBP05166 539 aa8.08□□□□□ -1.12
CHD6-201ENST00000309279 SYPP08247 313 aa8.08□□□□□ -1.12
CHD6-201ENST00000309279 QDPRP09417 244 aa8.08□□□□□ -1.12
CHD6-201ENST00000309279 GPR89BP0CG08 455 aa8.08□□□□□ -1.12
CHD6-201ENST00000309279 CTSKP43235 329 aa8.08□□□□□ -1.12
CHD6-201ENST00000309279 RPL21P46778 160 aaKnown RBP8.08□□□□□ -1.12
CHD6-201ENST00000309279 PSMD7P51665 324 aa8.08□□□□□ -1.12
CHD6-201ENST00000309279 PPP5CP53041 499 aa8.08□□□□□ -1.12
CHD6-201ENST00000309279 SESN2P58004 480 aaPredicted RBP8.08□□□□□ -1.12
CHD6-201ENST00000309279 NXPH1P58417 271 aa8.08□□□□□ -1.12
CHD6-201ENST00000309279 MRPS25P82663 173 aaKnown RBP8.08□□□□□ -1.12
CHD6-201ENST00000309279 XIAPP98170 497 aa8.08□□□□□ -1.12
CHD6-201ENST00000309279 ACVR1Q04771 509 aa8.08□□□□□ -1.12
CHD6-201ENST00000309279 EFR3AQ14156 821 aa8.08□□□□□ -1.12
CHD6-201ENST00000309279 PTPRCAPQ14761 206 aa8.08□□□□□ -1.12
CHD6-201ENST00000309279 CCDC6Q16204 474 aa8.08□□□□□ -1.12
CHD6-201ENST00000309279 SKIDA1Q1XH10 827 aa8.08□□□□□ -1.12
CHD6-201ENST00000309279 KIF19Q2TAC6 998 aa8.08□□□□□ -1.12
CHD6-201ENST00000309279 PCID2Q5JVF3 399 aa8.08□□□□□ -1.12
CHD6-201ENST00000309279 FAM209BQ5JX69 171 aa8.08□□□□□ -1.12
CHD6-201ENST00000309279 SNAP47Q5SQN1 464 aa8.08□□□□□ -1.12
CHD6-201ENST00000309279 KANK2Q63ZY3 851 aa8.08□□□□□ -1.12
CHD6-201ENST00000309279 THOC7Q6I9Y2 204 aaKnown RBP8.08□□□□□ -1.12
CHD6-201ENST00000309279 WDR93Q6P2C0 686 aa8.08□□□□□ -1.12
CHD6-201ENST00000309279 PGBD2Q6P3X8 592 aa8.08□□□□□ -1.12
CHD6-201ENST00000309279 LAYNQ6UX15 382 aa8.08□□□□□ -1.12
CHD6-201ENST00000309279 KDM7AQ6ZMT4 941 aa8.08□□□□□ -1.12
CHD6-201ENST00000309279 SPARTQ8N0X7 666 aa8.08□□□□□ -1.12
CHD6-201ENST00000309279 TRAM1L1Q8N609 369 aa8.08□□□□□ -1.12
CHD6-201ENST00000309279 GPR161Q8N6U8 529 aaKnown RBP8.08□□□□□ -1.12
CHD6-201ENST00000309279 OR13H1Q8NG92 308 aa8.08□□□□□ -1.12
CHD6-201ENST00000309279 OR4K2Q8NGD2 314 aa8.08□□□□□ -1.12
CHD6-201ENST00000309279 OR13J1Q8NGT2 312 aa8.08□□□□□ -1.12
CHD6-201ENST00000309279 PPP1R35Q8TAP8 253 aa8.08□□□□□ -1.12
CHD6-201ENST00000309279 TRPC4APQ8TEL6 797 aa8.08□□□□□ -1.12
CHD6-201ENST00000309279 PTCD2Q8WV60 388 aaKnown RBP8.08□□□□□ -1.12
CHD6-201ENST00000309279 FUBP1Q96AE4 644 aaKnown RBP8.08□□□□□ -1.12
CHD6-201ENST00000309279 COX14Q96I36 57 aa8.08□□□□□ -1.12
CHD6-201ENST00000309279 AGAP2Q99490 1192 aa8.08□□□□□ -1.12
CHD6-201ENST00000309279 SPXQ9BT56 116 aa8.08□□□□□ -1.12
CHD6-201ENST00000309279 KIFC1Q9BW19 673 aa8.08□□□□□ -1.12
CHD6-201ENST00000309279 NUSAP1Q9BXS6 441 aaKnown RBP8.08□□□□□ -1.12
CHD6-201ENST00000309279 REXO4Q9GZR2 422 aaKnown RBP8.08□□□□□ -1.12
CHD6-201ENST00000309279 RAB17Q9H0T7 212 aa8.08□□□□□ -1.12
CHD6-201ENST00000309279 MRM3Q9HC36 420 aaKnown RBP8.08□□□□□ -1.12
CHD6-201ENST00000309279 BPIFA1Q9NP55 256 aa8.08□□□□□ -1.12
CHD6-201ENST00000309279 CHRAC1Q9NRG0 131 aa8.08□□□□□ -1.12
CHD6-201ENST00000309279 NLE1Q9NVX2 485 aaPredicted RBP8.08□□□□□ -1.12
CHD6-201ENST00000309279 EMC3Q9P0I2 261 aa8.08□□□□□ -1.12
CHD6-201ENST00000309279 APPL1Q9UKG1 709 aa8.08□□□□□ -1.12
CHD6-201ENST00000309279 SNX24Q9Y343 169 aa8.08□□□□□ -1.12
CHD6-201ENST00000309279 UTP11Q9Y3A2 253 aaKnown RBP8.08□□□□□ -1.12
CHD6-201ENST00000309279 TCAF1Q9Y4C2 921 aa8.08□□□□□ -1.12
CHD6-201ENST00000309279 OR1A2Q9Y585 309 aa8.08□□□□□ -1.12
CHD6-201ENST00000309279 PLXNB3Q9ULL4 1909 aa8.08□□□□□ -1.12
CHD6-201ENST00000309279 TDRD6O60522 2096 aaKnown RBP8.08□□□□□ -1.12
CHD6-201ENST00000309279 LRP4O75096 1905 aa8.08□□□□□ -1.12
CHD6-201ENST00000309279 ASCC3Q8N3C0 2202 aaKnown RBP8.08□□□□□ -1.12
CHD6-201ENST00000309279 GLYATL1P3A0A0U1RQE8 302 aa8.07□□□□□ -1.12
CHD6-201ENST00000309279 LOC100653049A0A140TA62 436 aa8.07□□□□□ -1.12
CHD6-201ENST00000309279 LNP1A1A4G5 178 aa8.07□□□□□ -1.12
CHD6-201ENST00000309279 MAGEB16A2A368 324 aa8.07□□□□□ -1.12
CHD6-201ENST00000309279 FADS2P1A8MWK0 482 aa8.07□□□□□ -1.12
CHD6-201ENST00000309279 NUDT19A8MXV4 375 aa8.07□□□□□ -1.12
CHD6-201ENST00000309279 GOLGA8MH3BSY2 632 aa8.07□□□□□ -1.12
CHD6-201ENST00000309279 DFNA5O60443 496 aa8.07□□□□□ -1.12
CHD6-201ENST00000309279 NIPSNAP2O75323 286 aa8.07□□□□□ -1.12
CHD6-201ENST00000309279 ATP6V1G1O75348 118 aa8.07□□□□□ -1.12
CHD6-201ENST00000309279 KRT34O76011 436 aa8.07□□□□□ -1.12
CHD6-201ENST00000309279 ABCB1P08183 1280 aaPredicted RBP8.07□□□□□ -1.12
CHD6-201ENST00000309279 MGAT1P26572 445 aa8.07□□□□□ -1.12
CHD6-201ENST00000309279 PEX2P28328 305 aa8.07□□□□□ -1.12
CHD6-201ENST00000309279 GPC1P35052 558 aa8.07□□□□□ -1.12
CHD6-201ENST00000309279 SPAM1P38567 509 aa8.07□□□□□ -1.12
CHD6-201ENST00000309279 GPR1P46091 355 aa8.07□□□□□ -1.12
CHD6-201ENST00000309279 ITGA8P53708 1063 aa8.07□□□□□ -1.12
CHD6-201ENST00000309279 CASP6P55212 293 aa8.07□□□□□ -1.12
CHD6-201ENST00000309279 C21orf59P57076 290 aa8.07□□□□□ -1.12
CHD6-201ENST00000309279 KIAA1024LP59773 190 aa8.07□□□□□ -1.12
CHD6-201ENST00000309279 CDK3Q00526 305 aa8.07□□□□□ -1.12
CHD6-201ENST00000309279 GRIK2Q13002 908 aa8.07□□□□□ -1.12
CHD6-201ENST00000309279 PEX6Q13608 980 aa8.07□□□□□ -1.12
CHD6-201ENST00000309279 PTK2BQ14289 1009 aa8.07□□□□□ -1.12
CHD6-201ENST00000309279 FZD2Q14332 565 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms