RNA–Protein interactions for RNA: ENST00000306378.10

BPTF-201, Transcript of bromodomain PHD finger transcription factor, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BPTF, Length 9,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-201ENST00000306378 EPHA10Q5JZY3 1008 aa18.98■□□□□ 0.63
BPTF-201ENST00000306378 FAM35AQ86V20 835 aa18.98■□□□□ 0.63
BPTF-201ENST00000306378 COMTD1Q86VU5 262 aa18.98■□□□□ 0.63
BPTF-201ENST00000306378 SCML4Q8N228 414 aa18.98■□□□□ 0.63
BPTF-201ENST00000306378 H3BSA7 217 aa18.98■□□□□ 0.63
BPTF-201ENST00000306378 RAB3BP20337 219 aa18.98■□□□□ 0.63
BPTF-201ENST00000306378 WACQ9BTA9 647 aa18.98■□□□□ 0.63
BPTF-201ENST00000306378 DNM1P34Q6PK57 102 aa18.98■□□□□ 0.63
BPTF-201ENST00000306378 BRD9Q9H8M2 597 aa18.98■□□□□ 0.63
BPTF-201ENST00000306378 ATP13A1Q9HD20 1204 aa18.98■□□□□ 0.63
BPTF-201ENST00000306378 GTF2IRD1Q9UHL9 959 aa18.98■□□□□ 0.63
BPTF-201ENST00000306378 B3GAT3O94766 335 aa18.98■□□□□ 0.63
BPTF-201ENST00000306378 RNASE12Q5GAN4 147 aaKnown RBP18.98■□□□□ 0.63
BPTF-201ENST00000306378 PAPD4Q6PIY7 484 aaKnown RBP18.98■□□□□ 0.63
BPTF-201ENST00000306378 ZNF627Q7L945 461 aa18.98■□□□□ 0.63
BPTF-201ENST00000306378 GID4Q8IVV7 300 aa18.98■□□□□ 0.63
BPTF-201ENST00000306378 OR7G1Q8NGA0 311 aa18.98■□□□□ 0.63
BPTF-201ENST00000306378 SLC13A3Q8WWT9 602 aa18.98■□□□□ 0.63
BPTF-201ENST00000306378 HNRNPABQ99729 332 aaKnown RBP18.98■□□□□ 0.63
BPTF-201ENST00000306378 HERVK_113P63132 956 aa18.98■□□□□ 0.63
BPTF-201ENST00000306378 RNF157Q96PX1 679 aa18.98■□□□□ 0.63
BPTF-201ENST00000306378 ZNF649Q9BS31 505 aa18.98■□□□□ 0.63
BPTF-201ENST00000306378 ERVK-6Q9BXR3 956 aa18.98■□□□□ 0.63
BPTF-201ENST00000306378 TLX3O43711 291 aaPredicted RBP18.97■□□□□ 0.63
BPTF-201ENST00000306378 DRICH1Q6PGQ1 229 aaPredicted RBP18.97■□□□□ 0.63
BPTF-201ENST00000306378 PGBD3Q8N328 593 aa18.97■□□□□ 0.63
BPTF-201ENST00000306378 TTLL6Q8N841 843 aa18.97■□□□□ 0.63
BPTF-201ENST00000306378 ZNF490Q9ULM2 529 aaPredicted RBP18.97■□□□□ 0.63
BPTF-201ENST00000306378 CRB1P82279 1406 aa18.97■□□□□ 0.63
BPTF-201ENST00000306378 CDK10Q15131 360 aa18.97■□□□□ 0.63
BPTF-201ENST00000306378 FIP1L1Q6UN15 594 aaKnown RBP18.97■□□□□ 0.63
BPTF-201ENST00000306378 SLC30A10Q6XR72 485 aa18.97■□□□□ 0.63
BPTF-201ENST00000306378 HSFY1Q96LI6 401 aa18.97■□□□□ 0.63
BPTF-201ENST00000306378 COL20A1Q9P218 1284 aa18.97■□□□□ 0.63
BPTF-201ENST00000306378 PCDHGA8Q9Y5G5 932 aa18.97■□□□□ 0.63
BPTF-201ENST00000306378 RDH16O75452 317 aa18.97■□□□□ 0.63
BPTF-201ENST00000306378 ERVK-8P63133 956 aa18.97■□□□□ 0.63
BPTF-201ENST00000306378 RPL13AP3Q6NVV1 102 aa18.97■□□□□ 0.63
BPTF-201ENST00000306378 TWNKQ96RR1 684 aa18.97■□□□□ 0.63
BPTF-201ENST00000306378 PAK1IP1Q9NWT1 392 aaPredicted RBP18.97■□□□□ 0.63
BPTF-201ENST00000306378 ARL5AQ9Y689 179 aa18.97■□□□□ 0.63
BPTF-201ENST00000306378 CEMIPQ8WUJ3 1361 aa18.97■□□□□ 0.63
BPTF-201ENST00000306378 E9PAM4 449 aa18.97■□□□□ 0.63
BPTF-201ENST00000306378 CARM1Q86X55 608 aa18.97■□□□□ 0.63
BPTF-201ENST00000306378 KCNU1A8MYU2 1149 aa18.97■□□□□ 0.63
BPTF-201ENST00000306378 LRRTM2O43300 516 aa18.97■□□□□ 0.63
BPTF-201ENST00000306378 TMEM80Q96HE8 168 aa18.97■□□□□ 0.63
BPTF-201ENST00000306378 RAD9AQ99638 391 aa18.97■□□□□ 0.63
BPTF-201ENST00000306378 PNPOQ9NVS9 261 aa18.97■□□□□ 0.63
BPTF-201ENST00000306378 FLRT1Q9NZU1 646 aa18.97■□□□□ 0.63
BPTF-201ENST00000306378 FBXO5Q9UKT4 447 aa18.97■□□□□ 0.63
BPTF-201ENST00000306378 FOXO4P98177 505 aa18.97■□□□□ 0.63
BPTF-201ENST00000306378 C2orf80Q0P641 193 aa18.97■□□□□ 0.63
BPTF-201ENST00000306378 TNFRSF25Q93038 417 aa18.97■□□□□ 0.63
BPTF-201ENST00000306378 SLC41A3Q96GZ6 507 aa18.97■□□□□ 0.63
BPTF-201ENST00000306378 EIF5A2Q9GZV4 153 aaKnown RBP18.97■□□□□ 0.63
BPTF-201ENST00000306378 PTPRHQ9HD43 1115 aa18.97■□□□□ 0.63
BPTF-201ENST00000306378 MT-ND2P03891 347 aa18.97■□□□□ 0.63
BPTF-201ENST00000306378 ALG10BQ5I7T1 473 aa18.97■□□□□ 0.63
BPTF-201ENST00000306378 PRAF2O60831 178 aa18.96■□□□□ 0.63
BPTF-201ENST00000306378 ZNF20P17024 532 aa18.96■□□□□ 0.63
BPTF-201ENST00000306378 MAP2K3P46734 347 aa18.96■□□□□ 0.63
BPTF-201ENST00000306378 NDST1P52848 882 aa18.96■□□□□ 0.63
BPTF-201ENST00000306378 ARSKQ6UWY0 536 aa18.96■□□□□ 0.63
BPTF-201ENST00000306378 B3GNT4Q9C0J1 378 aa18.96■□□□□ 0.63
BPTF-201ENST00000306378 ACTR10Q9NZ32 417 aa18.96■□□□□ 0.63
BPTF-201ENST00000306378 H7C417 338 aa18.96■□□□□ 0.63
BPTF-201ENST00000306378 MT-ND5P03915 603 aa18.96■□□□□ 0.63
BPTF-201ENST00000306378 ZNF182P17025 639 aaPredicted RBP18.96■□□□□ 0.63
BPTF-201ENST00000306378 FMO3P31513 532 aa18.96■□□□□ 0.63
BPTF-201ENST00000306378 GK3PQ14409 553 aa18.96■□□□□ 0.63
BPTF-201ENST00000306378 FAM174BQ3ZCQ3 159 aa18.96■□□□□ 0.63
BPTF-201ENST00000306378 SCRN2Q96FV2 425 aa18.96■□□□□ 0.63
BPTF-201ENST00000306378 DDX6P26196 483 aaKnown RBP eCLIP18.96■□□□□ 0.63
BPTF-201ENST00000306378 SMARCB1Q12824 385 aa18.96■□□□□ 0.63
BPTF-201ENST00000306378 PNCKQ6P2M8 343 aa18.96■□□□□ 0.63
BPTF-201ENST00000306378 CPB2Q96IY4 423 aa18.96■□□□□ 0.63
BPTF-201ENST00000306378 SVILO95425 2214 aa18.96■□□□□ 0.63
BPTF-201ENST00000306378 ANKRD36CQ5JPF3 1778 aa18.96■□□□□ 0.63
BPTF-201ENST00000306378 ARPC2O15144 300 aa18.96■□□□□ 0.63
BPTF-201ENST00000306378 LRATO95237 230 aa18.96■□□□□ 0.63
BPTF-201ENST00000306378 XRCC1P18887 633 aaPredicted RBP18.96■□□□□ 0.63
BPTF-201ENST00000306378 SPATA20Q8TB22 786 aa18.96■□□□□ 0.63
BPTF-201ENST00000306378 ZBED6CLQ96FA7 236 aaPredicted RBP18.96■□□□□ 0.63
BPTF-201ENST00000306378 SRRDQ9UH36 339 aa18.96■□□□□ 0.63
BPTF-201ENST00000306378 SIX4Q9UIU6 781 aa18.96■□□□□ 0.63
BPTF-201ENST00000306378 ANKRD22Q5VYY1 191 aa18.96■□□□□ 0.63
BPTF-201ENST00000306378 C3orf33Q6P1S2 294 aa18.96■□□□□ 0.63
BPTF-201ENST00000306378 SCUBE3Q8IX30 993 aa18.96■□□□□ 0.63
BPTF-201ENST00000306378 PURBQ96QR8 312 aaKnown RBP18.96■□□□□ 0.63
BPTF-201ENST00000306378 ENAMQ9NRM1 1142 aa18.96■□□□□ 0.63
BPTF-201ENST00000306378 SPTLC1O15269 473 aa18.96■□□□□ 0.63
BPTF-201ENST00000306378 SUPT20HL2P0C7V6 817 aa18.96■□□□□ 0.63
BPTF-201ENST00000306378 MPSTP25325 297 aa18.96■□□□□ 0.63
BPTF-201ENST00000306378 GPR153Q6NV75 609 aa18.96■□□□□ 0.63
BPTF-201ENST00000306378 C3orf58Q8NDZ4 430 aa18.96■□□□□ 0.63
BPTF-201ENST00000306378 ERCC1P07992 297 aaPredicted RBP18.96■□□□□ 0.63
BPTF-201ENST00000306378 COL6A1P12109 1028 aa18.96■□□□□ 0.63
BPTF-201ENST00000306378 ZNF425Q6IV72 752 aa18.96■□□□□ 0.63
BPTF-201ENST00000306378 PARK7Q99497 189 aaKnown RBP18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms