RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 PDE10AQ9Y233 779 aa15.63■□□□□ 0.09
USP42-201ENST00000306177 CBFA2T3O75081 653 aa15.62■□□□□ 0.09
USP42-201ENST00000306177 NOVP48745 357 aa15.62■□□□□ 0.09
USP42-201ENST00000306177 SLC18A2Q05940 514 aa15.62■□□□□ 0.09
USP42-201ENST00000306177 MYLK3Q32MK0 819 aa15.62■□□□□ 0.09
USP42-201ENST00000306177 SLC25A24Q6NUK1 477 aa15.62■□□□□ 0.09
USP42-201ENST00000306177 NAPRTQ6XQN6 538 aa15.62■□□□□ 0.09
USP42-201ENST00000306177 NUDT13Q86X67 352 aa15.62■□□□□ 0.09
USP42-201ENST00000306177 CELF5Q8N6W0 485 aaKnown RBP15.62■□□□□ 0.09
USP42-201ENST00000306177 SLC22A18Q96BI1 424 aa15.62■□□□□ 0.09
USP42-201ENST00000306177 PEBP4Q96S96 227 aa15.62■□□□□ 0.09
USP42-201ENST00000306177 CCM2Q9BSQ5 444 aa15.62■□□□□ 0.09
USP42-201ENST00000306177 COQ10BQ9H8M1 238 aa15.62■□□□□ 0.09
USP42-201ENST00000306177 A0A1W2PRB8 838 aa15.62■□□□□ 0.09
USP42-201ENST00000306177 SLBPQ14493 270 aaKnown RBP eCLIP15.62■□□□□ 0.09
USP42-201ENST00000306177 RNF220Q5VTB9 566 aa15.62■□□□□ 0.09
USP42-201ENST00000306177 OR5K1Q8NHB7 308 aa15.62■□□□□ 0.09
USP42-201ENST00000306177 ATP1B2P14415 290 aaPredicted RBP15.62■□□□□ 0.09
USP42-201ENST00000306177 ZNF30P17039 623 aa15.62■□□□□ 0.09
USP42-201ENST00000306177 FSHRP23945 695 aa15.62■□□□□ 0.09
USP42-201ENST00000306177 ZNF461Q8TAF7 563 aa15.62■□□□□ 0.09
USP42-201ENST00000306177 BCL2L14Q9BZR8 327 aa15.62■□□□□ 0.09
USP42-201ENST00000306177 TPK1Q9H3S4 243 aa15.62■□□□□ 0.09
USP42-201ENST00000306177 VRTNQ9H8Y1 702 aa15.62■□□□□ 0.09
USP42-201ENST00000306177 MRM3Q9HC36 420 aaKnown RBP15.62■□□□□ 0.09
USP42-201ENST00000306177 CKLFQ9UBR5 152 aa15.62■□□□□ 0.09
USP42-201ENST00000306177 GABRQQ9UN88 632 aa15.62■□□□□ 0.09
USP42-201ENST00000306177 PRORSD1PA6NEY8 169 aa15.62■□□□□ 0.09
USP42-201ENST00000306177 MAGEB3O15480 346 aa15.62■□□□□ 0.09
USP42-201ENST00000306177 IDH3BO43837 385 aa15.62■□□□□ 0.09
USP42-201ENST00000306177 PRKCHP24723 683 aa15.62■□□□□ 0.09
USP42-201ENST00000306177 SLC7A1P30825 629 aa15.62■□□□□ 0.09
USP42-201ENST00000306177 ACSBG2Q5FVE4 666 aa15.62■□□□□ 0.09
USP42-201ENST00000306177 PDPRQ8NCN5 879 aa15.62■□□□□ 0.09
USP42-201ENST00000306177 ZIM2Q9NZV7 527 aa15.62■□□□□ 0.09
USP42-201ENST00000306177 MYCLP1P12525 358 aaPredicted RBP15.61■□□□□ 0.09
USP42-201ENST00000306177 GJA1P17302 382 aa15.61■□□□□ 0.09
USP42-201ENST00000306177 VARSP26640 1264 aaKnown RBP15.61■□□□□ 0.09
USP42-201ENST00000306177 ARFIP1P53367 373 aa15.61■□□□□ 0.09
USP42-201ENST00000306177 CRISP3P54108 245 aa15.61■□□□□ 0.09
USP42-201ENST00000306177 HMGCS1Q01581 520 aa15.61■□□□□ 0.09
USP42-201ENST00000306177 KLF1Q13351 362 aaPredicted RBP15.61■□□□□ 0.09
USP42-201ENST00000306177 ZNF311Q5JNZ3 666 aa15.61■□□□□ 0.09
USP42-201ENST00000306177 TIFABQ6ZNK6 161 aa15.61■□□□□ 0.09
USP42-201ENST00000306177 Q6ZVU0 165 aa15.61■□□□□ 0.09
USP42-201ENST00000306177 COX18Q8N8Q8 333 aa15.61■□□□□ 0.09
USP42-201ENST00000306177 ASB9Q96DX5 294 aa15.61■□□□□ 0.09
USP42-201ENST00000306177 ZNF570Q96NI8 536 aa15.61■□□□□ 0.09
USP42-201ENST00000306177 PDCD10Q9BUL8 212 aa15.61■□□□□ 0.09
USP42-201ENST00000306177 TIMMDC1Q9NPL8 285 aa15.61■□□□□ 0.09
USP42-201ENST00000306177 MCUBQ9NWR8 336 aa15.61■□□□□ 0.09
USP42-201ENST00000306177 OAS3Q9Y6K5 1087 aaKnown RBP15.61■□□□□ 0.09
USP42-201ENST00000306177 SLC30A4O14863 429 aa15.61■□□□□ 0.09
USP42-201ENST00000306177 RB1P06400 928 aa15.61■□□□□ 0.09
USP42-201ENST00000306177 AVPR1BP47901 424 aa15.61■□□□□ 0.09
USP42-201ENST00000306177 RPS6KA3P51812 740 aa15.61■□□□□ 0.09
USP42-201ENST00000306177 PCDH1Q08174 1060 aa15.61■□□□□ 0.09
USP42-201ENST00000306177 MMAAQ8IVH4 418 aaKnown RBP15.61■□□□□ 0.09
USP42-201ENST00000306177 SLC7A8Q9UHI5 535 aa15.61■□□□□ 0.09
USP42-201ENST00000306177 PRAMEF11O60813 436 aa15.61■□□□□ 0.09
USP42-201ENST00000306177 CLDN7O95471 211 aa15.61■□□□□ 0.09
USP42-201ENST00000306177 F7P08709 466 aaPredicted RBP15.61■□□□□ 0.09
USP42-201ENST00000306177 ACP5P13686 325 aa15.61■□□□□ 0.09
USP42-201ENST00000306177 RYKP34925 604 aa15.61■□□□□ 0.09
USP42-201ENST00000306177 ACTR1BP42025 376 aa15.61■□□□□ 0.09
USP42-201ENST00000306177 ACTR1AP61163 376 aa15.61■□□□□ 0.09
USP42-201ENST00000306177 CYB5D2Q8WUJ1 264 aa15.61■□□□□ 0.09
USP42-201ENST00000306177 OR52B2Q96RD2 323 aa15.61■□□□□ 0.09
USP42-201ENST00000306177 SLC29A3Q9BZD2 475 aa15.61■□□□□ 0.09
USP42-201ENST00000306177 ZNF222Q9UK12 451 aa15.61■□□□□ 0.09
USP42-201ENST00000306177 PDE4DIPQ5VU43 2346 aa15.61■□□□□ 0.09
USP42-201ENST00000306177 UBXN7O94888 489 aa15.61■□□□□ 0.09
USP42-201ENST00000306177 C9P02748 559 aa15.61■□□□□ 0.09
USP42-201ENST00000306177 SRPRAP08240 638 aaKnown RBP15.61■□□□□ 0.09
USP42-201ENST00000306177 POU2F1P14859 743 aa15.61■□□□□ 0.09
USP42-201ENST00000306177 IL7RP16871 459 aa15.61■□□□□ 0.09
USP42-201ENST00000306177 NDUFS1P28331 727 aa15.61■□□□□ 0.09
USP42-201ENST00000306177 SDC2P34741 201 aa15.61■□□□□ 0.09
USP42-201ENST00000306177 EIPR1Q53HC9 387 aa15.61■□□□□ 0.09
USP42-201ENST00000306177 SPIN4Q56A73 249 aa15.61■□□□□ 0.09
USP42-201ENST00000306177 PRAMEF14Q5SWL7 426 aa15.61■□□□□ 0.09
USP42-201ENST00000306177 RBM20Q5T481 1227 aaKnown RBP15.61■□□□□ 0.09
USP42-201ENST00000306177 PRAMEF13Q5VWM6 474 aa15.61■□□□□ 0.09
USP42-201ENST00000306177 FRG2Q64ET8 278 aa15.61■□□□□ 0.09
USP42-201ENST00000306177 TPRG1Q6ZUI0 275 aa15.61■□□□□ 0.09
USP42-201ENST00000306177 PIM3Q86V86 326 aa15.61■□□□□ 0.09
USP42-201ENST00000306177 P2RY8Q86VZ1 359 aa15.61■□□□□ 0.09
USP42-201ENST00000306177 OXR1Q8N573 874 aa15.61■□□□□ 0.09
USP42-201ENST00000306177 NATD1Q8N6N6 113 aa15.61■□□□□ 0.09
USP42-201ENST00000306177 DCAF4L2Q8NA75 395 aa15.61■□□□□ 0.09
USP42-201ENST00000306177 SNX33Q8WV41 574 aa15.61■□□□□ 0.09
USP42-201ENST00000306177 FAR1Q8WVX9 515 aa15.61■□□□□ 0.09
USP42-201ENST00000306177 LRRC58Q96CX6 371 aa15.61■□□□□ 0.09
USP42-201ENST00000306177 FRG2BQ96QU4 278 aa15.61■□□□□ 0.09
USP42-201ENST00000306177 CNPPD1Q9BV87 410 aa15.61■□□□□ 0.09
USP42-201ENST00000306177 TDP1Q9NUW8 608 aa15.61■□□□□ 0.09
USP42-201ENST00000306177 THUMPD1Q9NXG2 353 aaKnown RBP15.61■□□□□ 0.09
USP42-201ENST00000306177 MAN2B2Q9Y2E5 1009 aa15.61■□□□□ 0.09
USP42-201ENST00000306177 INSL5Q9Y5Q6 135 aa15.61■□□□□ 0.09
USP42-201ENST00000306177 COL2A1P02458 1487 aaPredicted RBP15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms