RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 FCHO2Q0JRZ9 810 aa13.67□□□□□ -0.22
PRKCB-201ENST00000303531 SCARB2Q14108 478 aa13.67□□□□□ -0.22
PRKCB-201ENST00000303531 FBXL22Q6P050 247 aa13.67□□□□□ -0.22
PRKCB-201ENST00000303531 USP43Q70EL4 1123 aa13.67□□□□□ -0.22
PRKCB-201ENST00000303531 FCGR1BQ92637 280 aa13.67□□□□□ -0.22
PRKCB-201ENST00000303531 CDKN2AIPNLQ96HQ2 116 aa13.67□□□□□ -0.22
PRKCB-201ENST00000303531 SNTG1Q9NSN8 517 aa13.67□□□□□ -0.22
PRKCB-201ENST00000303531 TEX264Q9Y6I9 313 aa13.67□□□□□ -0.22
PRKCB-201ENST00000303531 A0A1W2PRG6 482 aa13.67□□□□□ -0.22
PRKCB-201ENST00000303531 DLX3O60479 287 aa13.67□□□□□ -0.22
PRKCB-201ENST00000303531 C8AP07357 584 aa13.67□□□□□ -0.22
PRKCB-201ENST00000303531 DNASE1L1P49184 302 aa13.67□□□□□ -0.22
PRKCB-201ENST00000303531 CLCN4P51793 760 aa13.67□□□□□ -0.22
PRKCB-201ENST00000303531 C1QTNF8P60827 252 aa13.67□□□□□ -0.22
PRKCB-201ENST00000303531 HFE2Q6ZVN8 426 aa13.67□□□□□ -0.22
PRKCB-201ENST00000303531 C12orf66Q96MD2 445 aa13.67□□□□□ -0.22
PRKCB-201ENST00000303531 CD320Q9NPF0 282 aa13.67□□□□□ -0.22
PRKCB-201ENST00000303531 NKX1-2Q9UD57 310 aaPredicted RBP13.67□□□□□ -0.22
PRKCB-201ENST00000303531 GLTPD2A6NH11 291 aa13.66□□□□□ -0.22
PRKCB-201ENST00000303531 MTRF1O75570 445 aaKnown RBP13.66□□□□□ -0.22
PRKCB-201ENST00000303531 HCAR3P49019 387 aa13.66□□□□□ -0.22
PRKCB-201ENST00000303531 SLC39A4Q6P5W5 647 aa13.66□□□□□ -0.22
PRKCB-201ENST00000303531 PIM3Q86V86 326 aa13.66□□□□□ -0.22
PRKCB-201ENST00000303531 ZNF599Q96NL3 588 aa13.66□□□□□ -0.22
PRKCB-201ENST00000303531 NFAT5O94916 1531 aa13.66□□□□□ -0.22
PRKCB-201ENST00000303531 TCHHQ07283 1943 aa13.66□□□□□ -0.22
PRKCB-201ENST00000303531 RSL1D1O76021 490 aaKnown RBP13.66□□□□□ -0.22
PRKCB-201ENST00000303531 PAPSS2O95340 614 aaPredicted RBP13.66□□□□□ -0.22
PRKCB-201ENST00000303531 MAT2AP31153 395 aaKnown RBP13.66□□□□□ -0.22
PRKCB-201ENST00000303531 ZC3HC1Q86WB0 502 aaKnown RBP13.66□□□□□ -0.22
PRKCB-201ENST00000303531 CCDC59Q9P031 241 aaKnown RBP13.66□□□□□ -0.22
PRKCB-201ENST00000303531 A0A1W2PRB8 838 aa13.66□□□□□ -0.22
PRKCB-201ENST00000303531 FRMD7Q6ZUT3 714 aa13.66□□□□□ -0.22
PRKCB-201ENST00000303531 DBF4BQ8NFT6 615 aa13.66□□□□□ -0.22
PRKCB-201ENST00000303531 AHSGP02765 367 aa13.66□□□□□ -0.22
PRKCB-201ENST00000303531 DDX6P26196 483 aaKnown RBP eCLIP13.66□□□□□ -0.221e-9■□□□□ 8.6
PRKCB-201ENST00000303531 CARD16Q5EG05 197 aa13.66□□□□□ -0.22
PRKCB-201ENST00000303531 COX18Q8N8Q8 333 aa13.66□□□□□ -0.22
PRKCB-201ENST00000303531 KCTD13Q8WZ19 329 aa13.66□□□□□ -0.22
PRKCB-201ENST00000303531 BCO2Q9BYV7 579 aa13.66□□□□□ -0.22
PRKCB-201ENST00000303531 J3KR12 359 aa13.66□□□□□ -0.22
PRKCB-201ENST00000303531 SLC31A1O15431 190 aa13.66□□□□□ -0.22
PRKCB-201ENST00000303531 ZNF12P17014 697 aa13.66□□□□□ -0.22
PRKCB-201ENST00000303531 PRKCHP24723 683 aa13.66□□□□□ -0.22
PRKCB-201ENST00000303531 ARHGAP1Q07960 439 aa13.66□□□□□ -0.22
PRKCB-201ENST00000303531 VITQ6UXI7 678 aa13.66□□□□□ -0.22
PRKCB-201ENST00000303531 CHST4Q8NCG5 386 aa13.66□□□□□ -0.22
PRKCB-201ENST00000303531 OR10G2Q8NGC3 310 aa13.66□□□□□ -0.22
PRKCB-201ENST00000303531 IFT27Q9BW83 186 aa13.66□□□□□ -0.22
PRKCB-201ENST00000303531 ABCG4Q9H172 646 aa13.66□□□□□ -0.22
PRKCB-201ENST00000303531 RGS20O76081 388 aa13.66□□□□□ -0.22
PRKCB-201ENST00000303531 PRPS1L1P21108 318 aa13.66□□□□□ -0.22
PRKCB-201ENST00000303531 CCNFP41002 786 aa13.66□□□□□ -0.22
PRKCB-201ENST00000303531 GPR33Q49SQ1 333 aa13.66□□□□□ -0.22
PRKCB-201ENST00000303531 IQCCQ4KMZ1 466 aa13.66□□□□□ -0.22
PRKCB-201ENST00000303531 GAL3ST4Q96RP7 486 aa13.66□□□□□ -0.22
PRKCB-201ENST00000303531 PRRG4Q9BZD6 226 aa13.66□□□□□ -0.22
PRKCB-201ENST00000303531 POLR2J3Q9H1A7 115 aaKnown RBP13.66□□□□□ -0.22
PRKCB-201ENST00000303531 RNF39Q9H2S5 420 aa13.66□□□□□ -0.22
PRKCB-201ENST00000303531 SRMSQ9H3Y6 488 aa13.66□□□□□ -0.22
PRKCB-201ENST00000303531 DPEP2Q9H4A9 486 aa13.66□□□□□ -0.22
PRKCB-201ENST00000303531 AMBNQ9NP70 447 aa13.66□□□□□ -0.22
PRKCB-201ENST00000303531 CPN2P22792 545 aa13.65□□□□□ -0.22
PRKCB-201ENST00000303531 NCBP2P52298 156 aaKnown RBP eCLIP13.65□□□□□ -0.22
PRKCB-201ENST00000303531 AP3S2P59780 193 aa13.65□□□□□ -0.22
PRKCB-201ENST00000303531 ZNF280AP59817 542 aaPredicted RBP13.65□□□□□ -0.22
PRKCB-201ENST00000303531 OLIG2Q13516 323 aa13.65□□□□□ -0.22
PRKCB-201ENST00000303531 TAS2R7Q9NYW3 318 aa13.65□□□□□ -0.22
PRKCB-201ENST00000303531 ATRNL1Q5VV63 1379 aa13.65□□□□□ -0.22
PRKCB-201ENST00000303531 TIGD6Q17RP2 521 aa13.65□□□□□ -0.22
PRKCB-201ENST00000303531 CCDC80Q76M96 950 aa13.65□□□□□ -0.22
PRKCB-201ENST00000303531 SLC22A17Q8WUG5 538 aa13.65□□□□□ -0.22
PRKCB-201ENST00000303531 MRPS30Q9NP92 439 aaKnown RBP13.65□□□□□ -0.22
PRKCB-201ENST00000303531 GKN1Q9NS71 199 aa13.65□□□□□ -0.22
PRKCB-201ENST00000303531 HAS3O00219 553 aa13.65□□□□□ -0.22
PRKCB-201ENST00000303531 CRISP3P54108 245 aa13.65□□□□□ -0.22
PRKCB-201ENST00000303531 KLHL22Q53GT1 634 aa13.65□□□□□ -0.22
PRKCB-201ENST00000303531 FAM210AQ96ND0 272 aa13.65□□□□□ -0.22
PRKCB-201ENST00000303531 VPS29Q9UBQ0 182 aa13.65□□□□□ -0.22
PRKCB-201ENST00000303531 MALT1Q9UDY8 824 aa13.65□□□□□ -0.22
PRKCB-201ENST00000303531 A0A075B6Q4 140 aa13.65□□□□□ -0.22
PRKCB-201ENST00000303531 FABP12A6NFH5 140 aa13.65□□□□□ -0.22
PRKCB-201ENST00000303531 TNFAIP8L1Q8WVP5 186 aa13.65□□□□□ -0.22
PRKCB-201ENST00000303531 METTL21AQ8WXB1 218 aa13.65□□□□□ -0.22
PRKCB-201ENST00000303531 TAMM41Q96BW9 452 aa13.65□□□□□ -0.22
PRKCB-201ENST00000303531 CGREF1Q99674 301 aa13.65□□□□□ -0.22
PRKCB-201ENST00000303531 SNED1Q8TER0 1413 aa13.65□□□□□ -0.22
PRKCB-201ENST00000303531 KLF11O14901 512 aa13.65□□□□□ -0.22
PRKCB-201ENST00000303531 B3GALT2O43825 422 aa13.65□□□□□ -0.22
PRKCB-201ENST00000303531 CYP11A1P05108 521 aa13.65□□□□□ -0.22
PRKCB-201ENST00000303531 ALPPP05187 535 aa13.65□□□□□ -0.22
PRKCB-201ENST00000303531 ANXA8P13928 327 aa13.65□□□□□ -0.22
PRKCB-201ENST00000303531 ALKBH2Q6NS38 261 aa13.65□□□□□ -0.22
PRKCB-201ENST00000303531 RASSF6Q6ZTQ3 369 aa13.65□□□□□ -0.22
PRKCB-201ENST00000303531 AMZ2Q86W34 360 aa13.65□□□□□ -0.22
PRKCB-201ENST00000303531 KREMEN2Q8NCW0 462 aa13.65□□□□□ -0.22
PRKCB-201ENST00000303531 SLC35F5Q8WV83 523 aa13.65□□□□□ -0.22
PRKCB-201ENST00000303531 A0A1W2PQ72 361 aa13.65□□□□□ -0.22
PRKCB-201ENST00000303531 TMEM88BA6NKF7 163 aa13.65□□□□□ -0.22
PRKCB-201ENST00000303531 AREL1O15033 823 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms