RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 CAPSLQ8WWF8 208 aa13.76□□□□□ -0.21
SDC2-201ENST00000302190 CHCHD6Q9BRQ6 235 aa13.76□□□□□ -0.21
SDC2-201ENST00000302190 OSGEPL1Q9H4B0 414 aa13.76□□□□□ -0.21
SDC2-201ENST00000302190 CTPS2Q9NRF8 586 aa13.76□□□□□ -0.21
SDC2-201ENST00000302190 TMEM181Q9P2C4 612 aa13.76□□□□□ -0.21
SDC2-201ENST00000302190 PER2O15055 1255 aa13.75□□□□□ -0.21
SDC2-201ENST00000302190 CYP2A7P20853 494 aa13.75□□□□□ -0.21
SDC2-201ENST00000302190 AGXTP21549 392 aa13.75□□□□□ -0.21
SDC2-201ENST00000302190 HOXD10P28358 340 aa13.75□□□□□ -0.21
SDC2-201ENST00000302190 GPC1P35052 558 aa13.75□□□□□ -0.21
SDC2-201ENST00000302190 RPS14P62263 151 aaKnown RBP13.75□□□□□ -0.21
SDC2-201ENST00000302190 CES5AQ6NT32 575 aa13.75□□□□□ -0.21
SDC2-201ENST00000302190 ZFYVE19Q96K21 471 aa13.75□□□□□ -0.21
SDC2-201ENST00000302190 SMG9Q9H0W8 520 aaKnown RBP13.75□□□□□ -0.21
SDC2-201ENST00000302190 SCML2Q9UQR0 700 aa13.75□□□□□ -0.21
SDC2-201ENST00000302190 FPGTO14772 594 aa13.75□□□□□ -0.21
SDC2-201ENST00000302190 TBX1O43435 398 aa13.75□□□□□ -0.21
SDC2-201ENST00000302190 CLDN9O95484 217 aa13.75□□□□□ -0.21
SDC2-201ENST00000302190 MAPK1P28482 360 aa13.75□□□□□ -0.21
SDC2-201ENST00000302190 PTGER3P43115 390 aa13.75□□□□□ -0.21
SDC2-201ENST00000302190 ZXDBP98169 803 aa13.75□□□□□ -0.21
SDC2-201ENST00000302190 NFKB2Q00653 900 aa13.75□□□□□ -0.21
SDC2-201ENST00000302190 RUNX1T1Q06455 604 aa13.75□□□□□ -0.21
SDC2-201ENST00000302190 SELPLGQ14242 412 aa13.75□□□□□ -0.21
SDC2-201ENST00000302190 ACOX1Q15067 660 aa13.75□□□□□ -0.21
SDC2-201ENST00000302190 ZNF284Q2VY69 593 aa13.75□□□□□ -0.21
SDC2-201ENST00000302190 TMEM236Q5W0B7 351 aa13.75□□□□□ -0.21
SDC2-201ENST00000302190 FAM180BQ6P0A1 224 aa13.75□□□□□ -0.21
SDC2-201ENST00000302190 ADGRG5Q8IZF4 528 aa13.75□□□□□ -0.21
SDC2-201ENST00000302190 GTPBP3Q969Y2 492 aaKnown RBP13.75□□□□□ -0.21
SDC2-201ENST00000302190 TAMM41Q96BW9 452 aa13.75□□□□□ -0.21
SDC2-201ENST00000302190 ZNF597Q96LX8 424 aa13.75□□□□□ -0.21
SDC2-201ENST00000302190 ATP13A3Q9H7F0 1226 aa13.75□□□□□ -0.21
SDC2-201ENST00000302190 INTS10Q9NVR2 710 aaKnown RBP13.75□□□□□ -0.21
SDC2-201ENST00000302190 DKK3Q9UBP4 350 aa13.75□□□□□ -0.21
SDC2-201ENST00000302190 PCDHB3Q9Y5E6 796 aa13.75□□□□□ -0.21
SDC2-201ENST00000302190 CPQQ9Y646 472 aa13.75□□□□□ -0.21
SDC2-201ENST00000302190 EIF3FO00303 357 aaPredicted RBP13.75□□□□□ -0.21
SDC2-201ENST00000302190 IFRD1O00458 451 aaPredicted RBP13.75□□□□□ -0.21
SDC2-201ENST00000302190 NDUFS2O75306 463 aa13.75□□□□□ -0.21
SDC2-201ENST00000302190 BCAP31P51572 246 aa13.75□□□□□ -0.21
SDC2-201ENST00000302190 ALDH6A1Q02252 535 aaKnown RBP13.75□□□□□ -0.21
SDC2-201ENST00000302190 CACNG1Q06432 222 aa13.75□□□□□ -0.21
SDC2-201ENST00000302190 ELAVL2Q12926 359 aaKnown RBP13.75□□□□□ -0.21
SDC2-201ENST00000302190 ZNF362Q5T0B9 420 aaPredicted RBP13.75□□□□□ -0.21
SDC2-201ENST00000302190 RSBN1Q5VWQ0 802 aaPredicted RBP13.75□□□□□ -0.21
SDC2-201ENST00000302190 HMBOX1Q6NT76 420 aa13.75□□□□□ -0.21
SDC2-201ENST00000302190 CHERPQ8IWX8 916 aaKnown RBP13.75□□□□□ -0.21
SDC2-201ENST00000302190 PGBD5Q8N414 524 aa13.75□□□□□ -0.21
SDC2-201ENST00000302190 RBM4BQ9BQ04 359 aaKnown RBP13.75□□□□□ -0.21
SDC2-201ENST00000302190 RBM4Q9BWF3 364 aaKnown RBP13.75□□□□□ -0.21
SDC2-201ENST00000302190 TDRD1Q9BXT4 1180 aaKnown RBP13.75□□□□□ -0.21
SDC2-201ENST00000302190 CFAP97Q9P2B7 532 aa13.75□□□□□ -0.21
SDC2-201ENST00000302190 F5P12259 2224 aa13.75□□□□□ -0.21
SDC2-201ENST00000302190 MTMR11A4FU01 709 aa13.74□□□□□ -0.21
SDC2-201ENST00000302190 LZTS3O60299 673 aaPredicted RBP13.74□□□□□ -0.21
SDC2-201ENST00000302190 TRBC1P01850 177 aa13.74□□□□□ -0.21
SDC2-201ENST00000302190 MAPKAPK2P49137 400 aa13.74□□□□□ -0.21
SDC2-201ENST00000302190 CDH4P55283 916 aa13.74□□□□□ -0.21
SDC2-201ENST00000302190 CYP4F8P98187 520 aa13.74□□□□□ -0.21
SDC2-201ENST00000302190 OR9Q1Q8NGQ5 310 aa13.74□□□□□ -0.21
SDC2-201ENST00000302190 TFAP2CQ92754 450 aa13.74□□□□□ -0.21
SDC2-201ENST00000302190 ZNF419Q96HQ0 510 aaPredicted RBP13.74□□□□□ -0.21
SDC2-201ENST00000302190 DPH2Q9BQC3 489 aaPredicted RBP13.74□□□□□ -0.21
SDC2-201ENST00000302190 CEP44Q9C0F1 390 aa13.74□□□□□ -0.21
SDC2-201ENST00000302190 DERL2Q9GZP9 239 aa13.74□□□□□ -0.21
SDC2-201ENST00000302190 NUAK2Q9H093 628 aa13.74□□□□□ -0.21
SDC2-201ENST00000302190 VAPAQ9P0L0 249 aa13.74□□□□□ -0.21
SDC2-201ENST00000302190 MAP4K5Q9Y4K4 846 aa13.74□□□□□ -0.21
SDC2-201ENST00000302190 K7EPI3 171 aa13.74□□□□□ -0.21
SDC2-201ENST00000302190 SLC28A1O00337 649 aa13.74□□□□□ -0.21
SDC2-201ENST00000302190 SCAMP1O15126 338 aa13.74□□□□□ -0.21
SDC2-201ENST00000302190 TPST2O60704 377 aa13.74□□□□□ -0.21
SDC2-201ENST00000302190 UMPSP11172 480 aa13.74□□□□□ -0.21
SDC2-201ENST00000302190 CDH1P12830 882 aa13.74□□□□□ -0.21
SDC2-201ENST00000302190 FDXRP22570 491 aa13.74□□□□□ -0.21
SDC2-201ENST00000302190 SLC16A1P53985 500 aa13.74□□□□□ -0.21
SDC2-201ENST00000302190 SPIBQ01892 262 aa13.74□□□□□ -0.21
SDC2-201ENST00000302190 FPGSQ05932 587 aa13.74□□□□□ -0.21
SDC2-201ENST00000302190 GRM2Q14416 872 aa13.74□□□□□ -0.21
SDC2-201ENST00000302190 ANKRD34AQ69YU3 496 aa13.74□□□□□ -0.21
SDC2-201ENST00000302190 ZNF605Q86T29 641 aa13.74□□□□□ -0.21
SDC2-201ENST00000302190 ITIH5Q86UX2 942 aa13.74□□□□□ -0.21
SDC2-201ENST00000302190 RGL4Q8IZJ4 473 aa13.74□□□□□ -0.21
SDC2-201ENST00000302190 RNF175Q8N4F7 328 aa13.74□□□□□ -0.21
SDC2-201ENST00000302190 RTP3Q9BQQ7 232 aa13.74□□□□□ -0.21
SDC2-201ENST00000302190 BRD9Q9H8M2 597 aa13.74□□□□□ -0.21
SDC2-201ENST00000302190 PRDM8Q9NQV8 689 aa13.74□□□□□ -0.21
SDC2-201ENST00000302190 SDR39U1Q9NRG7 319 aaPredicted RBP13.74□□□□□ -0.21
SDC2-201ENST00000302190 AIG1Q9NVV5 245 aa13.74□□□□□ -0.21
SDC2-201ENST00000302190 C1orf109Q9NX04 203 aa13.74□□□□□ -0.21
SDC2-201ENST00000302190 ADPRHL2Q9NX46 363 aa13.74□□□□□ -0.21
SDC2-201ENST00000302190 PRELID1Q9Y255 219 aa13.74□□□□□ -0.21
SDC2-201ENST00000302190 OR6C75A6NL08 312 aa13.74□□□□□ -0.21
SDC2-201ENST00000302190 ZNF12P17014 697 aa13.74□□□□□ -0.21
SDC2-201ENST00000302190 EEFSECP57772 596 aaKnown RBP13.74□□□□□ -0.21
SDC2-201ENST00000302190 INTS11Q5TA45 600 aaKnown RBP13.74□□□□□ -0.21
SDC2-201ENST00000302190 TYW3Q6IPR3 259 aaKnown RBP13.74□□□□□ -0.21
SDC2-201ENST00000302190 TMPRSS11BQ86T26 416 aa13.74□□□□□ -0.21
SDC2-201ENST00000302190 CENPSQ8N2Z9 138 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms