RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.56■□□□□ 0.88
SMCO4-201ENST00000298966 MOSPD1Q9UJG1 213 aa20.56■□□□□ 0.88
SMCO4-201ENST00000298966 SLC39A10Q9ULF5 831 aa20.56■□□□□ 0.88
SMCO4-201ENST00000298966 VWA7Q9Y334 891 aa20.56■□□□□ 0.88
SMCO4-201ENST00000298966 ICE1Q9Y2F5 2266 aa20.56■□□□□ 0.88
SMCO4-201ENST00000298966 RELNP78509 3460 aa20.55■□□□□ 0.88
SMCO4-201ENST00000298966 A0A096LPK6 155 aa20.55■□□□□ 0.88
SMCO4-201ENST00000298966 GOLGA8RI6L899 631 aa20.55■□□□□ 0.88
SMCO4-201ENST00000298966 GAPDHSO14556 408 aaPredicted RBP20.55■□□□□ 0.88
SMCO4-201ENST00000298966 ASMTLO95671 621 aa20.55■□□□□ 0.88
SMCO4-201ENST00000298966 ACRV1P26436 265 aa20.55■□□□□ 0.88
SMCO4-201ENST00000298966 RPA3P35244 121 aaPredicted RBP20.55■□□□□ 0.88
SMCO4-201ENST00000298966 BIRC2Q13490 618 aa20.55■□□□□ 0.88
SMCO4-201ENST00000298966 TRA2AQ13595 282 aaKnown RBP eCLIP20.55■□□□□ 0.88
SMCO4-201ENST00000298966 SEMA3AQ14563 771 aa20.55■□□□□ 0.88
SMCO4-201ENST00000298966 TSNAXIP1Q2TAA8 658 aa20.55■□□□□ 0.88
SMCO4-201ENST00000298966 HECTD2Q5U5R9 776 aa20.55■□□□□ 0.88
SMCO4-201ENST00000298966 TTC19Q6DKK2 380 aaPredicted RBP20.55■□□□□ 0.88
SMCO4-201ENST00000298966 FAM151BQ6UXP7 276 aa20.55■□□□□ 0.88
SMCO4-201ENST00000298966 TECPR1Q7Z6L1 1165 aa20.55■□□□□ 0.88
SMCO4-201ENST00000298966 NXPE1Q8N323 547 aa20.55■□□□□ 0.88
SMCO4-201ENST00000298966 GPATCH11Q8N954 259 aa20.55■□□□□ 0.88
SMCO4-201ENST00000298966 PLA2G15Q8NCC3 412 aa20.55■□□□□ 0.88
SMCO4-201ENST00000298966 GPR26Q8NDV2 337 aa20.55■□□□□ 0.88
SMCO4-201ENST00000298966 CCDC74BQ96LY2 380 aa20.55■□□□□ 0.88
SMCO4-201ENST00000298966 NUDT22Q9BRQ3 303 aa20.55■□□□□ 0.88
SMCO4-201ENST00000298966 AARSD1Q9BTE6 412 aaKnown RBP20.55■□□□□ 0.88
SMCO4-201ENST00000298966 MID2Q9UJV3 735 aa20.55■□□□□ 0.88
SMCO4-201ENST00000298966 ACOT9Q9Y305 439 aa20.55■□□□□ 0.88
SMCO4-201ENST00000298966 B3GALT1Q9Y5Z6 326 aa20.55■□□□□ 0.88
SMCO4-201ENST00000298966 UNC79Q9P2D8 2635 aa20.54■□□□□ 0.88
SMCO4-201ENST00000298966 IGHV5-10-1A0A0J9YXX1 117 aa20.54■□□□□ 0.88
SMCO4-201ENST00000298966 PRMT5O14744 637 aaPredicted RBP20.54■□□□□ 0.88
SMCO4-201ENST00000298966 RAD1O60671 282 aa20.54■□□□□ 0.88
SMCO4-201ENST00000298966 C2P06681 752 aa20.54■□□□□ 0.88
SMCO4-201ENST00000298966 APOA4P06727 396 aa20.54■□□□□ 0.88
SMCO4-201ENST00000298966 PKMP14618 531 aaKnown RBP20.54■□□□□ 0.88
SMCO4-201ENST00000298966 CSTF2P33240 577 aaKnown RBP eCLIP20.54■□□□□ 0.88
SMCO4-201ENST00000298966 MAZP56270 477 aaKnown RBP20.54■□□□□ 0.88
SMCO4-201ENST00000298966 WDR4P57081 412 aaKnown RBP20.54■□□□□ 0.88
SMCO4-201ENST00000298966 CHRNA6Q15825 494 aa20.54■□□□□ 0.88
SMCO4-201ENST00000298966 CCDC153Q494R4 210 aa20.54■□□□□ 0.88
SMCO4-201ENST00000298966 UGT3A1Q6NUS8 523 aa20.54■□□□□ 0.88
SMCO4-201ENST00000298966 RAPH1Q70E73 1250 aa20.54■□□□□ 0.88
SMCO4-201ENST00000298966 ZNF438Q7Z4V0 828 aa20.54■□□□□ 0.88
SMCO4-201ENST00000298966 AGBL5Q8NDL9 886 aa20.54■□□□□ 0.88
SMCO4-201ENST00000298966 CCL4L1Q8NHW4 92 aa20.54■□□□□ 0.88
SMCO4-201ENST00000298966 TCP10LQ8TDR4 215 aa20.54■□□□□ 0.88
SMCO4-201ENST00000298966 DYDC1Q8WWB3 177 aa20.54■□□□□ 0.88
SMCO4-201ENST00000298966 CKAP2Q8WWK9 683 aa20.54■□□□□ 0.88
SMCO4-201ENST00000298966 PMEPA1Q969W9 287 aa20.54■□□□□ 0.88
SMCO4-201ENST00000298966 DTD2Q96FN9 168 aa20.54■□□□□ 0.88
SMCO4-201ENST00000298966 COQ10AQ96MF6 247 aa20.54■□□□□ 0.88
SMCO4-201ENST00000298966 VPS35Q96QK1 796 aa20.54■□□□□ 0.88
SMCO4-201ENST00000298966 DDA1Q9BW61 102 aa20.54■□□□□ 0.88
SMCO4-201ENST00000298966 ASPSCR1Q9BZE9 553 aa20.54■□□□□ 0.88
SMCO4-201ENST00000298966 TAS2R13Q9NYV9 303 aa20.54■□□□□ 0.88
SMCO4-201ENST00000298966 PLLPQ9Y342 182 aa20.54■□□□□ 0.88
SMCO4-201ENST00000298966 CREBBPQ92793 2442 aa20.53■□□□□ 0.88
SMCO4-201ENST00000298966 UBA6A0AVT1 1052 aaPredicted RBP20.53■□□□□ 0.88
SMCO4-201ENST00000298966 CCDC189A1A4V9 331 aa20.53■□□□□ 0.88
SMCO4-201ENST00000298966 A8MX80 341 aa20.53■□□□□ 0.88
SMCO4-201ENST00000298966 QSOX1O00391 747 aa20.53■□□□□ 0.88
SMCO4-201ENST00000298966 HOXC4P09017 264 aaPredicted RBP20.53■□□□□ 0.88
SMCO4-201ENST00000298966 FDXRP22570 491 aa20.53■□□□□ 0.88
SMCO4-201ENST00000298966 SKIV2L2P42285 1042 aaKnown RBP20.53■□□□□ 0.88
SMCO4-201ENST00000298966 NSG1P42857 185 aa20.53■□□□□ 0.88
SMCO4-201ENST00000298966 ACOX1Q15067 660 aa20.53■□□□□ 0.88
SMCO4-201ENST00000298966 HENMT1Q5T8I9 393 aaKnown RBP20.53■□□□□ 0.88
SMCO4-201ENST00000298966 HHATQ5VTY9 493 aa20.53■□□□□ 0.88
SMCO4-201ENST00000298966 HSD11B1LQ7Z5J1 315 aa20.53■□□□□ 0.88
SMCO4-201ENST00000298966 SERPINA9Q86WD7 417 aa20.53■□□□□ 0.88
SMCO4-201ENST00000298966 ATCAYQ86WG3 371 aa20.53■□□□□ 0.88
SMCO4-201ENST00000298966 PIANPQ8IYJ0 282 aa20.53■□□□□ 0.88
SMCO4-201ENST00000298966 MGARPQ8TDB4 240 aa20.53■□□□□ 0.88
SMCO4-201ENST00000298966 ZDHHC1Q8WTX9 485 aa20.53■□□□□ 0.88
SMCO4-201ENST00000298966 SLC45A3Q96JT2 553 aa20.53■□□□□ 0.88
SMCO4-201ENST00000298966 VPS11Q9H270 941 aa20.53■□□□□ 0.88
SMCO4-201ENST00000298966 SYTL2Q9HCH5 934 aa20.53■□□□□ 0.88
SMCO4-201ENST00000298966 SLC39A1Q9NY26 324 aa20.53■□□□□ 0.88
SMCO4-201ENST00000298966 ZDHHC3Q9NYG2 299 aa20.53■□□□□ 0.88
SMCO4-201ENST00000298966 GNPTGQ9UJJ9 305 aa20.53■□□□□ 0.88
SMCO4-201ENST00000298966 RP1L1Q8IWN7 2480 aaPredicted RBP20.53■□□□□ 0.88
SMCO4-201ENST00000298966 CFAP99D6REC4 459 aa20.52■□□□□ 0.88
SMCO4-201ENST00000298966 VPS26AO75436 327 aa20.52■□□□□ 0.88
SMCO4-201ENST00000298966 RECQL5O94762 991 aaPredicted RBP20.52■□□□□ 0.88
SMCO4-201ENST00000298966 DHRS4L1P0CG22 281 aa20.52■□□□□ 0.88
SMCO4-201ENST00000298966 CD1CP29017 333 aa20.52■□□□□ 0.88
SMCO4-201ENST00000298966 TAS2R39P59534 338 aa20.52■□□□□ 0.88
SMCO4-201ENST00000298966 DPTQ07507 201 aa20.52■□□□□ 0.88
SMCO4-201ENST00000298966 NR1D2Q14995 579 aa20.52■□□□□ 0.88
SMCO4-201ENST00000298966 ZNF789Q5FWF6 425 aa20.52■□□□□ 0.88
SMCO4-201ENST00000298966 Q6ZVL8 140 aa20.52■□□□□ 0.88
SMCO4-201ENST00000298966 CMC1Q7Z7K0 106 aa20.52■□□□□ 0.88
SMCO4-201ENST00000298966 TBC1D1Q86TI0 1168 aaPredicted RBP20.52■□□□□ 0.88
SMCO4-201ENST00000298966 LDB1Q86U70 411 aaPredicted RBP20.52■□□□□ 0.88
SMCO4-201ENST00000298966 C17orf82Q86X59 251 aaPredicted RBP20.52■□□□□ 0.88
SMCO4-201ENST00000298966 KCNJ9Q92806 393 aa20.52■□□□□ 0.88
SMCO4-201ENST00000298966 KIAA1143Q96AT1 154 aaPredicted RBP20.52■□□□□ 0.88
SMCO4-201ENST00000298966 COPS8Q99627 209 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms