RNA–Protein interactions for RNA: ENST00000297316.4

SOX17-201, Transcript of SRY-box 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX17, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17-201ENST00000297316 ZNF8P17098 575 aaPredicted RBP20.82■□□□□ 0.92
SOX17-201ENST00000297316 CD72P21854 359 aa20.82■□□□□ 0.92
SOX17-201ENST00000297316 MRPS22P82650 360 aaKnown RBP20.82■□□□□ 0.92
SOX17-201ENST00000297316 FGL2Q14314 439 aa20.82■□□□□ 0.92
SOX17-201ENST00000297316 CCSMST1Q4G0I0 132 aa20.82■□□□□ 0.92
SOX17-201ENST00000297316 DOK6Q6PKX4 331 aa20.82■□□□□ 0.92
SOX17-201ENST00000297316 NUDT8Q8WV74 236 aa20.82■□□□□ 0.92
SOX17-201ENST00000297316 VPS33AQ96AX1 596 aa20.82■□□□□ 0.92
SOX17-201ENST00000297316 TMEM159Q96B96 161 aa20.82■□□□□ 0.92
SOX17-201ENST00000297316 GABRG3Q99928 467 aa20.82■□□□□ 0.92
SOX17-201ENST00000297316 OSBPL6Q9BZF3 934 aa20.82■□□□□ 0.92
SOX17-201ENST00000297316 RIC8BQ9NVN3 520 aa20.82■□□□□ 0.92
SOX17-201ENST00000297316 FBXL12Q9NXK8 326 aa20.82■□□□□ 0.92
SOX17-201ENST00000297316 TMEM181Q9P2C4 612 aa20.82■□□□□ 0.92
SOX17-201ENST00000297316 SLC5A10A0PJK1 596 aa20.81■□□□□ 0.92
SOX17-201ENST00000297316 FXYD1O00168 92 aa20.81■□□□□ 0.92
SOX17-201ENST00000297316 STK16O75716 305 aa20.81■□□□□ 0.92
SOX17-201ENST00000297316 BCAS2O75934 225 aaPredicted RBP20.81■□□□□ 0.92
SOX17-201ENST00000297316 C8GP07360 202 aa20.81■□□□□ 0.92
SOX17-201ENST00000297316 HOXB2P14652 356 aa20.81■□□□□ 0.92
SOX17-201ENST00000297316 HMOX2P30519 316 aa20.81■□□□□ 0.92
SOX17-201ENST00000297316 ATP6AP1LQ52LC2 224 aa20.81■□□□□ 0.92
SOX17-201ENST00000297316 HEATR4Q86WZ0 1026 aa20.81■□□□□ 0.92
SOX17-201ENST00000297316 GPATCH1Q9BRR8 931 aaKnown RBP20.81■□□□□ 0.92
SOX17-201ENST00000297316 TRIM39Q9HCM9 518 aa20.81■□□□□ 0.92
SOX17-201ENST00000297316 SPAG4Q9NPE6 437 aa20.81■□□□□ 0.92
SOX17-201ENST00000297316 CD300AQ9UGN4 299 aa20.81■□□□□ 0.92
SOX17-201ENST00000297316 A6NHS1 94 aa20.81■□□□□ 0.92
SOX17-201ENST00000297316 BBIP1A8MTZ0 92 aa20.81■□□□□ 0.92
SOX17-201ENST00000297316 MRPL19P49406 292 aaKnown RBP20.81■□□□□ 0.92
SOX17-201ENST00000297316 SLC7A2P52569 658 aa20.81■□□□□ 0.92
SOX17-201ENST00000297316 ZNF658BQ4V348 819 aaPredicted RBP20.81■□□□□ 0.92
SOX17-201ENST00000297316 EEF1AKMT2Q5JPI9 291 aaKnown RBP20.81■□□□□ 0.92
SOX17-201ENST00000297316 PNCKQ6P2M8 343 aa20.81■□□□□ 0.92
SOX17-201ENST00000297316 XKR5Q6UX68 686 aa20.81■□□□□ 0.92
SOX17-201ENST00000297316 CD93Q9NPY3 652 aa20.81■□□□□ 0.92
SOX17-201ENST00000297316 ARHGEF33A8MVX0 844 aa20.8■□□□□ 0.92
SOX17-201ENST00000297316 QSOX1O00391 747 aa20.8■□□□□ 0.92
SOX17-201ENST00000297316 PAK4O96013 591 aaPredicted RBP20.8■□□□□ 0.92
SOX17-201ENST00000297316 CAPRIN1Q14444 709 aaKnown RBP20.8■□□□□ 0.92
SOX17-201ENST00000297316 NR6A1Q15406 480 aa20.8■□□□□ 0.92
SOX17-201ENST00000297316 RFTN2Q52LD8 501 aaPredicted RBP20.8■□□□□ 0.92
SOX17-201ENST00000297316 LPCAT4Q643R3 524 aa20.8■□□□□ 0.92
SOX17-201ENST00000297316 CFAP206Q8IYR0 622 aa20.8■□□□□ 0.92
SOX17-201ENST00000297316 TRIM8Q9BZR9 551 aa20.8■□□□□ 0.92
SOX17-201ENST00000297316 KLQ9UEF7 1012 aa20.8■□□□□ 0.92
SOX17-201ENST00000297316 NPC1O15118 1278 aa20.79■□□□□ 0.92
SOX17-201ENST00000297316 MBTPS2O43462 519 aa20.79■□□□□ 0.92
SOX17-201ENST00000297316 EPB42P16452 691 aa20.79■□□□□ 0.92
SOX17-201ENST00000297316 BDKRB1P46663 353 aa20.79■□□□□ 0.92
SOX17-201ENST00000297316 RCAN2Q14206 197 aa20.79■□□□□ 0.92
SOX17-201ENST00000297316 PDCD4Q53EL6 469 aaKnown RBP20.79■□□□□ 0.92
SOX17-201ENST00000297316 RALGPS2Q86X27 583 aaPredicted RBP20.79■□□□□ 0.92
SOX17-201ENST00000297316 OR14C36Q8NHC7 312 aa20.79■□□□□ 0.92
SOX17-201ENST00000297316 ROPN1LQ96C74 230 aa20.79■□□□□ 0.92
SOX17-201ENST00000297316 HIC2Q96JB3 615 aa20.79■□□□□ 0.92
SOX17-201ENST00000297316 CCT7Q99832 543 aa20.79■□□□□ 0.92
SOX17-201ENST00000297316 NTMT1Q9BV86 223 aa20.79■□□□□ 0.92
SOX17-201ENST00000297316 ATG10Q9H0Y0 220 aa20.79■□□□□ 0.92
SOX17-201ENST00000297316 ACTL8Q9H568 366 aa20.79■□□□□ 0.92
SOX17-201ENST00000297316 NDUFAF1Q9Y375 327 aa20.79■□□□□ 0.92
SOX17-201ENST00000297316 ANGPT2O15123 496 aa20.79■□□□□ 0.92
SOX17-201ENST00000297316 AP1G1O43747 822 aa20.79■□□□□ 0.92
SOX17-201ENST00000297316 DNAJA2O60884 412 aa20.79■□□□□ 0.92
SOX17-201ENST00000297316 HIST1H2AGP0C0S8 130 aaPredicted RBP20.79■□□□□ 0.92
SOX17-201ENST00000297316 HIST1H2ADP20671 130 aa20.79■□□□□ 0.92
SOX17-201ENST00000297316 GGT5P36269 586 aa20.79■□□□□ 0.92
SOX17-201ENST00000297316 HMGCS1Q01581 520 aa20.79■□□□□ 0.92
SOX17-201ENST00000297316 STARD3Q14849 445 aa20.79■□□□□ 0.92
SOX17-201ENST00000297316 SDE2Q6IQ49 451 aa20.79■□□□□ 0.92
SOX17-201ENST00000297316 PROKR1Q8TCW9 393 aa20.79■□□□□ 0.92
SOX17-201ENST00000297316 HIST1H2AHQ96KK5 128 aa20.79■□□□□ 0.92
SOX17-201ENST00000297316 HIST1H2AJQ99878 128 aa20.79■□□□□ 0.92
SOX17-201ENST00000297316 H2AFJQ9BTM1 129 aa20.79■□□□□ 0.92
SOX17-201ENST00000297316 SUCOQ9UBS9 1254 aaKnown RBP20.79■□□□□ 0.92
SOX17-201ENST00000297316 ZNHIT2Q9UHR6 403 aa20.79■□□□□ 0.92
SOX17-201ENST00000297316 COLQQ9Y215 455 aaPredicted RBP20.79■□□□□ 0.92
SOX17-201ENST00000297316 OR1A2Q9Y585 309 aa20.79■□□□□ 0.92
SOX17-201ENST00000297316 DNAH14Q0VDD8 3507 aa20.79■□□□□ 0.92
SOX17-201ENST00000297316 SHISA7A6NL88 538 aa20.78■□□□□ 0.92
SOX17-201ENST00000297316 SLC22A3O75751 556 aa20.78■□□□□ 0.92
SOX17-201ENST00000297316 G6PDP11413 515 aa20.78■□□□□ 0.92
SOX17-201ENST00000297316 CDKL1Q00532 357 aa20.78■□□□□ 0.92
SOX17-201ENST00000297316 LRRC36Q1X8D7 754 aa20.78■□□□□ 0.92
SOX17-201ENST00000297316 AP5B1Q2VPB7 878 aa20.78■□□□□ 0.92
SOX17-201ENST00000297316 PTCHD3Q3KNS1 767 aa20.78■□□□□ 0.92
SOX17-201ENST00000297316 SGO1Q5FBB7 561 aa20.78■□□□□ 0.92
SOX17-201ENST00000297316 PAGE3Q5JUK9 113 aa20.78■□□□□ 0.92
SOX17-201ENST00000297316 HABP4Q5JVS0 413 aaKnown RBP20.78■□□□□ 0.92
SOX17-201ENST00000297316 NEK5Q6P3R8 708 aa20.78■□□□□ 0.92
SOX17-201ENST00000297316 RASGRP3Q8IV61 690 aa20.78■□□□□ 0.92
SOX17-201ENST00000297316 PCYOX1LQ8NBM8 494 aa20.78■□□□□ 0.92
SOX17-201ENST00000297316 PPFIBP2Q8ND30 876 aa20.78■□□□□ 0.92
SOX17-201ENST00000297316 ASB9Q96DX5 294 aa20.78■□□□□ 0.92
SOX17-201ENST00000297316 COX14Q96I36 57 aa20.78■□□□□ 0.92
SOX17-201ENST00000297316 TRIM54Q9BYV2 358 aa20.78■□□□□ 0.92
SOX17-201ENST00000297316 SLC32A1Q9H598 525 aa20.78■□□□□ 0.92
SOX17-201ENST00000297316 PFDN4Q9NQP4 134 aa20.78■□□□□ 0.92
SOX17-201ENST00000297316 POLR3HQ9Y535 204 aaPredicted RBP20.78■□□□□ 0.92
SOX17-201ENST00000297316 NME4O00746 187 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms