RNA–Protein interactions for RNA: ENST00000296786.7

UBLCP1-201, Transcript of ubiquitin like domain containing CTD phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBLCP1, Length 2,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBLCP1-201ENST00000296786 PLCL1Q15111 1095 aa9.08□□□□□ -0.96
UBLCP1-201ENST00000296786 TMEM259Q4ZIN3 620 aa9.08□□□□□ -0.96
UBLCP1-201ENST00000296786 CDKL4Q5MAI5 379 aa9.08□□□□□ -0.96
UBLCP1-201ENST00000296786 Q6ZVU0 165 aa9.08□□□□□ -0.96
UBLCP1-201ENST00000296786 USP51Q70EK9 711 aa9.08□□□□□ -0.96
UBLCP1-201ENST00000296786 VRK3Q8IV63 474 aa9.08□□□□□ -0.96
UBLCP1-201ENST00000296786 PHACTR4Q8IZ21 702 aa9.08□□□□□ -0.96
UBLCP1-201ENST00000296786 SELENOMQ8WWX9 145 aa9.08□□□□□ -0.96
UBLCP1-201ENST00000296786 PYCR2Q96C36 320 aa9.08□□□□□ -0.96
UBLCP1-201ENST00000296786 TBCDQ9BTW9 1192 aa9.08□□□□□ -0.96
UBLCP1-201ENST00000296786 BEGAINQ9BUH8 593 aa9.08□□□□□ -0.96
UBLCP1-201ENST00000296786 CPEB1Q9BZB8 566 aaKnown RBP9.08□□□□□ -0.96
UBLCP1-201ENST00000296786 ZBP1Q9H171 429 aa9.08□□□□□ -0.96
UBLCP1-201ENST00000296786 PARVBQ9HBI1 364 aa9.08□□□□□ -0.96
UBLCP1-201ENST00000296786 TMEM39AQ9NV64 488 aa9.08□□□□□ -0.96
UBLCP1-201ENST00000296786 KLHL42Q9P2K6 505 aa9.08□□□□□ -0.96
UBLCP1-201ENST00000296786 B4GALT6Q9UBX8 382 aa9.08□□□□□ -0.96
UBLCP1-201ENST00000296786 ADGRE2Q9UHX3 823 aa9.08□□□□□ -0.96
UBLCP1-201ENST00000296786 SLCO3A1Q9UIG8 710 aa9.08□□□□□ -0.96
UBLCP1-201ENST00000296786 SLC25A13Q9UJS0 675 aa9.08□□□□□ -0.96
UBLCP1-201ENST00000296786 PCDHGA11Q9Y5H2 935 aa9.08□□□□□ -0.96
UBLCP1-201ENST00000296786 TRBV5-3A0A0A0MS03 114 aa9.07□□□□□ -0.96
UBLCP1-201ENST00000296786 ELOVL7A1L3X0 281 aa9.07□□□□□ -0.96
UBLCP1-201ENST00000296786 NEDD8-MDP1E9PL57 170 aa9.07□□□□□ -0.96
UBLCP1-201ENST00000296786 EIF3FO00303 357 aaPredicted RBP9.07□□□□□ -0.96
UBLCP1-201ENST00000296786 GRM6O15303 877 aa9.07□□□□□ -0.96
UBLCP1-201ENST00000296786 POP4O95707 220 aaKnown RBP9.07□□□□□ -0.96
UBLCP1-201ENST00000296786 ALBP02768 609 aa9.07□□□□□ -0.96
UBLCP1-201ENST00000296786 ALPLP05186 524 aa9.07□□□□□ -0.96
UBLCP1-201ENST00000296786 HIST1H2AGP0C0S8 130 aaPredicted RBP9.07□□□□□ -0.96
UBLCP1-201ENST00000296786 CCL5P13501 91 aa9.07□□□□□ -0.96
UBLCP1-201ENST00000296786 HIST1H2ADP20671 130 aa9.07□□□□□ -0.96
UBLCP1-201ENST00000296786 CCR2P41597 374 aa9.07□□□□□ -0.96
UBLCP1-201ENST00000296786 MNX1P50219 401 aaPredicted RBP9.07□□□□□ -0.96
UBLCP1-201ENST00000296786 ALDH3A2P51648 485 aa9.07□□□□□ -0.96
UBLCP1-201ENST00000296786 NEK2P51955 445 aa9.07□□□□□ -0.96
UBLCP1-201ENST00000296786 WDR5P61964 334 aaKnown RBP9.07□□□□□ -0.96
UBLCP1-201ENST00000296786 RPS14P62263 151 aaKnown RBP9.07□□□□□ -0.96
UBLCP1-201ENST00000296786 PHC1P78364 1004 aa9.07□□□□□ -0.96
UBLCP1-201ENST00000296786 GBX1Q14549 363 aa9.07□□□□□ -0.96
UBLCP1-201ENST00000296786 NKG7Q16617 165 aa9.07□□□□□ -0.96
UBLCP1-201ENST00000296786 ZIK1Q3SY52 487 aaPredicted RBP9.07□□□□□ -0.96
UBLCP1-201ENST00000296786 RUNDC3AQ59EK9 446 aa9.07□□□□□ -0.96
UBLCP1-201ENST00000296786 CARD16Q5EG05 197 aa9.07□□□□□ -0.96
UBLCP1-201ENST00000296786 LRRC70Q7Z2Q7 622 aa9.07□□□□□ -0.96
UBLCP1-201ENST00000296786 GPR141Q7Z602 305 aa9.07□□□□□ -0.96
UBLCP1-201ENST00000296786 TMEM25Q86YD3 366 aa9.07□□□□□ -0.96
UBLCP1-201ENST00000296786 CHST14Q8NCH0 376 aa9.07□□□□□ -0.96
UBLCP1-201ENST00000296786 ADAMTS16Q8TE57 1224 aa9.07□□□□□ -0.96
UBLCP1-201ENST00000296786 SLC22A17Q8WUG5 538 aa9.07□□□□□ -0.96
UBLCP1-201ENST00000296786 ASB11Q8WXH4 323 aa9.07□□□□□ -0.96
UBLCP1-201ENST00000296786 HIST1H2AHQ96KK5 128 aa9.07□□□□□ -0.96
UBLCP1-201ENST00000296786 HIST1H2AJQ99878 128 aa9.07□□□□□ -0.96
UBLCP1-201ENST00000296786 H2AFJQ9BTM1 129 aa9.07□□□□□ -0.96
UBLCP1-201ENST00000296786 SLC12A9Q9BXP2 914 aa9.07□□□□□ -0.96
UBLCP1-201ENST00000296786 UGT2B28Q9BY64 529 aa9.07□□□□□ -0.96
UBLCP1-201ENST00000296786 ELOVL6Q9H5J4 265 aa9.07□□□□□ -0.96
UBLCP1-201ENST00000296786 OCEL1Q9H607 264 aa9.07□□□□□ -0.96
UBLCP1-201ENST00000296786 LIN28AQ9H9Z2 209 aaKnown RBP9.07□□□□□ -0.96
UBLCP1-201ENST00000296786 LIMD1Q9UGP4 676 aa9.07□□□□□ -0.96
UBLCP1-201ENST00000296786 INVSQ9Y283 1065 aa9.07□□□□□ -0.96
UBLCP1-201ENST00000296786 PCDHB14Q9Y5E9 798 aa9.07□□□□□ -0.96
UBLCP1-201ENST00000296786 CXorf51AA0A1B0GTR3 108 aa9.07□□□□□ -0.96
UBLCP1-201ENST00000296786 H0Y858 1186 aa9.07□□□□□ -0.96
UBLCP1-201ENST00000296786 H0YAE9 185 aa9.07□□□□□ -0.96
UBLCP1-201ENST00000296786 CXCR6O00574 342 aa9.07□□□□□ -0.96
UBLCP1-201ENST00000296786 NUAK1O60285 661 aa9.07□□□□□ -0.96
UBLCP1-201ENST00000296786 MTX2O75431 263 aa9.07□□□□□ -0.96
UBLCP1-201ENST00000296786 FGF18O76093 207 aa9.07□□□□□ -0.96
UBLCP1-201ENST00000296786 C8GP07360 202 aa9.07□□□□□ -0.96
UBLCP1-201ENST00000296786 CTSAP10619 480 aa9.07□□□□□ -0.96
UBLCP1-201ENST00000296786 ATP1B2P14415 290 aaPredicted RBP9.07□□□□□ -0.96
UBLCP1-201ENST00000296786 PPM1AP35813 382 aa9.07□□□□□ -0.96
UBLCP1-201ENST00000296786 SLC6A12P48065 614 aa9.07□□□□□ -0.96
UBLCP1-201ENST00000296786 ESRRGP62508 458 aa9.07□□□□□ -0.96
UBLCP1-201ENST00000296786 CREMQ03060 361 aa9.07□□□□□ -0.96
UBLCP1-201ENST00000296786 DAG1Q14118 895 aa9.07□□□□□ -0.96
UBLCP1-201ENST00000296786 PTCHD3Q3KNS1 767 aa9.07□□□□□ -0.96
UBLCP1-201ENST00000296786 GGTA1PQ4G0N0 100 aa9.07□□□□□ -0.96
UBLCP1-201ENST00000296786 NEK5Q6P3R8 708 aa9.07□□□□□ -0.96
UBLCP1-201ENST00000296786 SERPINA13PQ6UXR4 307 aa9.07□□□□□ -0.96
UBLCP1-201ENST00000296786 GCNT7Q6ZNI0 430 aa9.07□□□□□ -0.96
UBLCP1-201ENST00000296786 NECAB2Q7Z6G3 386 aa9.07□□□□□ -0.96
UBLCP1-201ENST00000296786 STK32CQ86UX6 486 aa9.07□□□□□ -0.96
UBLCP1-201ENST00000296786 CLEC4FQ8N1N0 589 aa9.07□□□□□ -0.96
UBLCP1-201ENST00000296786 ELMOD1Q8N336 334 aa9.07□□□□□ -0.96
UBLCP1-201ENST00000296786 TCAIMQ8N3R3 496 aa9.07□□□□□ -0.96
UBLCP1-201ENST00000296786 LEMD2Q8NC56 503 aa9.07□□□□□ -0.96
UBLCP1-201ENST00000296786 FAM162AQ96A26 154 aa9.07□□□□□ -0.96
UBLCP1-201ENST00000296786 SLC47A1Q96FL8 570 aa9.07□□□□□ -0.96
UBLCP1-201ENST00000296786 AURKBQ96GD4 344 aaPredicted RBP9.07□□□□□ -0.96
UBLCP1-201ENST00000296786 ZNF641Q96N77 438 aaPredicted RBP9.07□□□□□ -0.96
UBLCP1-201ENST00000296786 YME1L1Q96TA2 773 aa9.07□□□□□ -0.96
UBLCP1-201ENST00000296786 SH3GL1Q99961 368 aa9.07□□□□□ -0.96
UBLCP1-201ENST00000296786 PAIP1Q9H074 479 aaKnown RBP9.07□□□□□ -0.96
UBLCP1-201ENST00000296786 KAT8Q9H7Z6 458 aaKnown RBP9.07□□□□□ -0.96
UBLCP1-201ENST00000296786 SERHLQ9NQF3 203 aa9.07□□□□□ -0.96
UBLCP1-201ENST00000296786 ASAH2Q9NR71 780 aa9.07□□□□□ -0.96
UBLCP1-201ENST00000296786 HCFC1R1Q9NWW0 138 aa9.07□□□□□ -0.96
UBLCP1-201ENST00000296786 UTS2RQ9UKP6 389 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms