RNA–Protein interactions for RNA: ENST00000295225.9

KCNIP3-201, Transcript of potassium voltage-gated channel interacting protein 3, humanhuman

TSL 1 (best) BASIC

Gene KCNIP3, Length 2,940 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3-201ENST00000295225 ZNF135P52742 658 aaPredicted RBP13.01□□□□□ -0.33
KCNIP3-201ENST00000295225 RELAQ04206 551 aa13.01□□□□□ -0.33
KCNIP3-201ENST00000295225 LCN8Q6JVE9 175 aa13.01□□□□□ -0.33
KCNIP3-201ENST00000295225 GPRIN3Q6ZVF9 776 aa13.01□□□□□ -0.33
KCNIP3-201ENST00000295225 TMCO2Q7Z6W1 182 aaPredicted RBP13.01□□□□□ -0.33
KCNIP3-201ENST00000295225 TMEM199Q8N511 208 aa13.01□□□□□ -0.33
KCNIP3-201ENST00000295225 TEX26Q8N6G2 289 aa13.01□□□□□ -0.33
KCNIP3-201ENST00000295225 SCUBE2Q9NQ36 999 aa13.01□□□□□ -0.33
KCNIP3-201ENST00000295225 MRPL40Q9NQ50 206 aaKnown RBP13.01□□□□□ -0.33
KCNIP3-201ENST00000295225 WARS2Q9UGM6 360 aaKnown RBP13.01□□□□□ -0.33
KCNIP3-201ENST00000295225 LIMD1Q9UGP4 676 aa13.01□□□□□ -0.33
KCNIP3-201ENST00000295225 PRSS21Q9Y6M0 314 aa13.01□□□□□ -0.33
KCNIP3-201ENST00000295225 PIKFYVEQ9Y2I7 2098 aa13.01□□□□□ -0.33
KCNIP3-201ENST00000295225 C1orf232A0A0U1RR37 186 aa13□□□□□ -0.33
KCNIP3-201ENST00000295225 ST8SIA5O15466 376 aa13□□□□□ -0.33
KCNIP3-201ENST00000295225 PAPSS2O95340 614 aaPredicted RBP13□□□□□ -0.33
KCNIP3-201ENST00000295225 ESRRBO95718 433 aa13□□□□□ -0.33
KCNIP3-201ENST00000295225 NDST3O95803 873 aa13□□□□□ -0.33
KCNIP3-201ENST00000295225 FGF1P05230 155 aa13□□□□□ -0.33
KCNIP3-201ENST00000295225 PRKAR2AP13861 404 aaKnown RBP13□□□□□ -0.33
KCNIP3-201ENST00000295225 HSD17B1P14061 328 aa13□□□□□ -0.33
KCNIP3-201ENST00000295225 ZNF140P52738 457 aaPredicted RBP13□□□□□ -0.33
KCNIP3-201ENST00000295225 CASP9P55211 416 aa13□□□□□ -0.33
KCNIP3-201ENST00000295225 FAM189BP81408 668 aa13□□□□□ -0.33
KCNIP3-201ENST00000295225 TAGLNQ01995 201 aaKnown RBP13□□□□□ -0.33
KCNIP3-201ENST00000295225 PHKG1Q16816 387 aa13□□□□□ -0.33
KCNIP3-201ENST00000295225 FAM174BQ3ZCQ3 159 aa13□□□□□ -0.33
KCNIP3-201ENST00000295225 ERAP2Q6P179 960 aa13□□□□□ -0.33
KCNIP3-201ENST00000295225 SPESP1Q6UW49 350 aa13□□□□□ -0.33
KCNIP3-201ENST00000295225 GCNT7Q6ZNI0 430 aa13□□□□□ -0.33
KCNIP3-201ENST00000295225 FRA10AC1Q70Z53 315 aa13□□□□□ -0.33
KCNIP3-201ENST00000295225 TMEM179BQ7Z7N9 219 aa13□□□□□ -0.33
KCNIP3-201ENST00000295225 PJA1Q8NG27 643 aa13□□□□□ -0.33
KCNIP3-201ENST00000295225 MYLIPQ8WY64 445 aa13□□□□□ -0.33
KCNIP3-201ENST00000295225 PYCR2Q96C36 320 aa13□□□□□ -0.33
KCNIP3-201ENST00000295225 NSMCE2Q96MF7 247 aa13□□□□□ -0.33
KCNIP3-201ENST00000295225 BARD1Q99728 777 aaKnown RBP13□□□□□ -0.33
KCNIP3-201ENST00000295225 EGFL8Q99944 293 aa13□□□□□ -0.33
KCNIP3-201ENST00000295225 C9orf16Q9BUW7 83 aa13□□□□□ -0.33
KCNIP3-201ENST00000295225 TFB2MQ9H5Q4 396 aaKnown RBP13□□□□□ -0.33
KCNIP3-201ENST00000295225 IFT22Q9H7X7 185 aa13□□□□□ -0.33
KCNIP3-201ENST00000295225 SLC39A1Q9NY26 324 aa13□□□□□ -0.33
KCNIP3-201ENST00000295225 PRKAG2Q9UGJ0 569 aa13□□□□□ -0.33
KCNIP3-201ENST00000295225 SYCE1LA8MT33 242 aa13□□□□□ -0.33
KCNIP3-201ENST00000295225 AGRPO00253 132 aa13□□□□□ -0.33
KCNIP3-201ENST00000295225 STX7O15400 261 aaKnown RBP13□□□□□ -0.33
KCNIP3-201ENST00000295225 XPNPEP2O43895 674 aa13□□□□□ -0.33
KCNIP3-201ENST00000295225 ICMTO60725 284 aa13□□□□□ -0.33
KCNIP3-201ENST00000295225 MITFO75030 526 aaPredicted RBP13□□□□□ -0.33
KCNIP3-201ENST00000295225 RASAL1O95294 804 aa13□□□□□ -0.33
KCNIP3-201ENST00000295225 PKMP14618 531 aaKnown RBP13□□□□□ -0.33
KCNIP3-201ENST00000295225 LSRQ86X29 649 aaPredicted RBP13□□□□□ -0.33
KCNIP3-201ENST00000295225 NCLNQ969V3 563 aa13□□□□□ -0.33
KCNIP3-201ENST00000295225 ARL5BQ96KC2 179 aa13□□□□□ -0.33
KCNIP3-201ENST00000295225 TRIB3Q96RU7 358 aa13□□□□□ -0.33
KCNIP3-201ENST00000295225 CSF3RQ99062 836 aa13□□□□□ -0.33
KCNIP3-201ENST00000295225 CIPCQ9C0C6 399 aa13□□□□□ -0.33
KCNIP3-201ENST00000295225 UBA2Q9UBT2 640 aaPredicted RBP13□□□□□ -0.33
KCNIP3-201ENST00000295225 ZNF69Q9UC07 566 aa13□□□□□ -0.33
KCNIP3-201ENST00000295225 KLQ9UEF7 1012 aa13□□□□□ -0.33
KCNIP3-201ENST00000295225 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13□□□□□ -0.33
KCNIP3-201ENST00000295225 RWDD3Q9Y3V2 267 aa13□□□□□ -0.33
KCNIP3-201ENST00000295225 REV3LO60673 3130 aa13□□□□□ -0.33
KCNIP3-201ENST00000295225 ANKRD36A6QL64 1941 aa12.99□□□□□ -0.33
KCNIP3-201ENST00000295225 C2orf78A6NCI8 922 aa12.99□□□□□ -0.33
KCNIP3-201ENST00000295225 NBNO60934 754 aa12.99□□□□□ -0.33
KCNIP3-201ENST00000295225 ALBP02768 609 aa12.99□□□□□ -0.33
KCNIP3-201ENST00000295225 RPS17P08708 135 aaKnown RBP12.99□□□□□ -0.33
KCNIP3-201ENST00000295225 ATF6P18850 670 aa12.99□□□□□ -0.33
KCNIP3-201ENST00000295225 TGFBR1P36897 503 aa12.99□□□□□ -0.33
KCNIP3-201ENST00000295225 CAPGP40121 348 aa12.99□□□□□ -0.33
KCNIP3-201ENST00000295225 PRKCZQ05513 592 aa12.99□□□□□ -0.33
KCNIP3-201ENST00000295225 SMAD4Q13485 552 aaKnown RBP12.99□□□□□ -0.33
KCNIP3-201ENST00000295225 DSC3Q14574 896 aa12.99□□□□□ -0.33
KCNIP3-201ENST00000295225 ZBED5Q49AG3 693 aa12.99□□□□□ -0.33
KCNIP3-201ENST00000295225 SPANXN4Q5MJ08 99 aa12.99□□□□□ -0.33
KCNIP3-201ENST00000295225 RNF219Q5W0B1 726 aaPredicted RBP12.99□□□□□ -0.33
KCNIP3-201ENST00000295225 CYP20A1Q6UW02 462 aa12.99□□□□□ -0.33
KCNIP3-201ENST00000295225 ABRAXAS1Q6UWZ7 409 aa12.99□□□□□ -0.33
KCNIP3-201ENST00000295225 R3HCC1LQ7Z5L2 792 aaKnown RBP12.99□□□□□ -0.33
KCNIP3-201ENST00000295225 COLGALT2Q8IYK4 626 aa12.99□□□□□ -0.33
KCNIP3-201ENST00000295225 ITFG1Q8TB96 612 aa12.99□□□□□ -0.33
KCNIP3-201ENST00000295225 SEPT8Q92599 483 aa12.99□□□□□ -0.33
KCNIP3-201ENST00000295225 TOP1MTQ969P6 601 aa12.99□□□□□ -0.33
KCNIP3-201ENST00000295225 FEM1CQ96JP0 617 aa12.99□□□□□ -0.33
KCNIP3-201ENST00000295225 IPPKQ9H8X2 491 aa12.99□□□□□ -0.33
KCNIP3-201ENST00000295225 FBXO10Q9UK96 956 aa12.99□□□□□ -0.33
KCNIP3-201ENST00000295225 AGO1Q9UL18 857 aaKnown RBP12.99□□□□□ -0.33
KCNIP3-201ENST00000295225 AQP12BA6NM10 295 aa12.99□□□□□ -0.33
KCNIP3-201ENST00000295225 GNGT2O14610 69 aa12.99□□□□□ -0.33
KCNIP3-201ENST00000295225 ZNF623O75123 536 aa12.99□□□□□ -0.33
KCNIP3-201ENST00000295225 SNX4O95219 450 aa12.99□□□□□ -0.33
KCNIP3-201ENST00000295225 HLA-DPA1P20036 260 aa12.99□□□□□ -0.33
KCNIP3-201ENST00000295225 IL2P60568 153 aa12.99□□□□□ -0.33
KCNIP3-201ENST00000295225 RPP38P78345 283 aaKnown RBP12.99□□□□□ -0.33
KCNIP3-201ENST00000295225 NFKB2Q00653 900 aa12.99□□□□□ -0.33
KCNIP3-201ENST00000295225 TRIP4Q15650 581 aaPredicted RBP12.99□□□□□ -0.33
KCNIP3-201ENST00000295225 CPSF6Q16630 551 aaKnown RBP eCLIP12.99□□□□□ -0.33
KCNIP3-201ENST00000295225 CLVS2Q5SYC1 327 aa12.99□□□□□ -0.33
KCNIP3-201ENST00000295225 DLEU7Q6UYE1 221 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms