RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 SLC29A3Q9BZD2 475 aa8.92□□□□□ -0.98
PDPN-201ENST00000294489 KLHL4Q9C0H6 718 aa8.92□□□□□ -0.98
PDPN-201ENST00000294489 CD300AQ9UGN4 299 aa8.92□□□□□ -0.98
PDPN-201ENST00000294489 LEF1Q9UJU2 399 aaPredicted RBP8.92□□□□□ -0.98
PDPN-201ENST00000294489 EIF3LQ9Y262 564 aaKnown RBP8.92□□□□□ -0.98
PDPN-201ENST00000294489 ZFC3H1O60293 1989 aaKnown RBP8.92□□□□□ -0.98
PDPN-201ENST00000294489 C5orf42Q9H799 3197 aa8.92□□□□□ -0.98
PDPN-201ENST00000294489 C10orf142B7Z368 130 aa8.92□□□□□ -0.98
PDPN-201ENST00000294489 FFAR3O14843 346 aa8.92□□□□□ -0.98
PDPN-201ENST00000294489 GPR42O15529 346 aa8.92□□□□□ -0.98
PDPN-201ENST00000294489 MMP20O60882 483 aa8.92□□□□□ -0.98
PDPN-201ENST00000294489 PSIP1O75475 530 aaKnown RBP8.92□□□□□ -0.98
PDPN-201ENST00000294489 NFYCQ13952 458 aa8.92□□□□□ -0.98
PDPN-201ENST00000294489 SMU1Q2TAY7 513 aa8.92□□□□□ -0.98
PDPN-201ENST00000294489 BEND7Q8N7W2 519 aaPredicted RBP8.92□□□□□ -0.98
PDPN-201ENST00000294489 OR2T3Q8NH03 318 aa8.92□□□□□ -0.98
PDPN-201ENST00000294489 LRRC58Q96CX6 371 aa8.92□□□□□ -0.98
PDPN-201ENST00000294489 ECSITQ9BQ95 431 aa8.92□□□□□ -0.98
PDPN-201ENST00000294489 CCM2Q9BSQ5 444 aa8.92□□□□□ -0.98
PDPN-201ENST00000294489 ZCCHC2Q9C0B9 1178 aaKnown RBP8.92□□□□□ -0.98
PDPN-201ENST00000294489 BATF3Q9NR55 127 aa8.92□□□□□ -0.98
PDPN-201ENST00000294489 GULP1Q9UBP9 304 aa8.92□□□□□ -0.98
PDPN-201ENST00000294489 ZNF490Q9ULM2 529 aaPredicted RBP8.92□□□□□ -0.98
PDPN-201ENST00000294489 COQ6Q9Y2Z9 468 aa8.92□□□□□ -0.98
PDPN-201ENST00000294489 RNF11Q9Y3C5 154 aa8.92□□□□□ -0.98
PDPN-201ENST00000294489 C2CD4DB7Z1M9 353 aa8.91□□□□□ -0.98
PDPN-201ENST00000294489 K7ESM1 405 aa8.91□□□□□ -0.98
PDPN-201ENST00000294489 MID1O15344 667 aa8.91□□□□□ -0.98
PDPN-201ENST00000294489 ADAM23O75077 832 aa8.91□□□□□ -0.98
PDPN-201ENST00000294489 EEDO75530 441 aaKnown RBP8.91□□□□□ -0.98
PDPN-201ENST00000294489 SLC2A4P14672 509 aa8.91□□□□□ -0.98
PDPN-201ENST00000294489 NTSR1P30989 418 aa8.91□□□□□ -0.98
PDPN-201ENST00000294489 MAPK9P45984 424 aa8.91□□□□□ -0.98
PDPN-201ENST00000294489 CLNS1AP54105 237 aaKnown RBP8.91□□□□□ -0.98
PDPN-201ENST00000294489 SMAD4Q13485 552 aaKnown RBP8.91□□□□□ -0.98
PDPN-201ENST00000294489 LRRC36Q1X8D7 754 aa8.91□□□□□ -0.98
PDPN-201ENST00000294489 SPATS1Q496A3 300 aa8.91□□□□□ -0.98
PDPN-201ENST00000294489 IL23RQ5VWK5 629 aa8.91□□□□□ -0.98
PDPN-201ENST00000294489 ZNF776Q68DI1 518 aaPredicted RBP8.91□□□□□ -0.98
PDPN-201ENST00000294489 RNF111Q6ZNA4 994 aa8.91□□□□□ -0.98
PDPN-201ENST00000294489 SLC22A15Q8IZD6 547 aa8.91□□□□□ -0.98
PDPN-201ENST00000294489 CXorf40AQ8TE69 158 aa8.91□□□□□ -0.98
PDPN-201ENST00000294489 VPS33AQ96AX1 596 aa8.91□□□□□ -0.98
PDPN-201ENST00000294489 TEX37Q96LM6 180 aa8.91□□□□□ -0.98
PDPN-201ENST00000294489 MAGEB10Q96LZ2 347 aaPredicted RBP8.91□□□□□ -0.98
PDPN-201ENST00000294489 PCDHAC1Q9H158 963 aa8.91□□□□□ -0.98
PDPN-201ENST00000294489 TRIM39Q9HCM9 518 aa8.91□□□□□ -0.98
PDPN-201ENST00000294489 FAM8A1Q9UBU6 413 aa8.91□□□□□ -0.98
PDPN-201ENST00000294489 GPR34Q9UPC5 381 aa8.91□□□□□ -0.98
PDPN-201ENST00000294489 C17orf113A0A1B0GUU1 675 aa8.91□□□□□ -0.98
PDPN-201ENST00000294489 A0A1W2PQF6 199 aa8.91□□□□□ -0.98
PDPN-201ENST00000294489 IFRD1O00458 451 aaPredicted RBP8.91□□□□□ -0.98
PDPN-201ENST00000294489 CASQ2O14958 399 aaPredicted RBP8.91□□□□□ -0.98
PDPN-201ENST00000294489 INPP4BO15327 924 aa8.91□□□□□ -0.98
PDPN-201ENST00000294489 VEGFDO43915 354 aa8.91□□□□□ -0.98
PDPN-201ENST00000294489 NPPAP01160 153 aa8.91□□□□□ -0.98
PDPN-201ENST00000294489 DRD1P21728 446 aa8.91□□□□□ -0.98
PDPN-201ENST00000294489 GNPDA1P46926 289 aa8.91□□□□□ -0.98
PDPN-201ENST00000294489 SLC6A12P48065 614 aa8.91□□□□□ -0.98
PDPN-201ENST00000294489 CTSCP53634 463 aa8.91□□□□□ -0.98
PDPN-201ENST00000294489 PCDH1Q08174 1060 aa8.91□□□□□ -0.98
PDPN-201ENST00000294489 ZXDCQ2QGD7 858 aaPredicted RBP8.91□□□□□ -0.98
PDPN-201ENST00000294489 PTCHD3Q3KNS1 767 aa8.91□□□□□ -0.98
PDPN-201ENST00000294489 RFTN2Q52LD8 501 aaPredicted RBP8.91□□□□□ -0.98
PDPN-201ENST00000294489 SGO1Q5FBB7 561 aa8.91□□□□□ -0.98
PDPN-201ENST00000294489 HABP4Q5JVS0 413 aaKnown RBP8.91□□□□□ -0.98
PDPN-201ENST00000294489 ZNF648Q5T619 568 aaPredicted RBP8.91□□□□□ -0.98
PDPN-201ENST00000294489 CYP20A1Q6UW02 462 aa8.91□□□□□ -0.98
PDPN-201ENST00000294489 TRIM46Q7Z4K8 759 aa8.91□□□□□ -0.98
PDPN-201ENST00000294489 TMEM126BQ8IUX1 230 aa8.91□□□□□ -0.98
PDPN-201ENST00000294489 KBTBD2Q8IY47 623 aa8.91□□□□□ -0.98
PDPN-201ENST00000294489 SLC44A3Q8N4M1 653 aa8.91□□□□□ -0.98
PDPN-201ENST00000294489 IL17RCQ8NAC3 791 aa8.91□□□□□ -0.98
PDPN-201ENST00000294489 FBXO15Q8NCQ5 510 aaPredicted RBP8.91□□□□□ -0.98
PDPN-201ENST00000294489 PROKR1Q8TCW9 393 aa8.91□□□□□ -0.98
PDPN-201ENST00000294489 MSANTD3Q96H12 275 aa8.91□□□□□ -0.98
PDPN-201ENST00000294489 ZBTB18Q99592 522 aa8.91□□□□□ -0.98
PDPN-201ENST00000294489 SLC52A3Q9NQ40 469 aa8.91□□□□□ -0.98
PDPN-201ENST00000294489 ABCD2Q9UBJ2 740 aa8.91□□□□□ -0.98
PDPN-201ENST00000294489 SNX6Q9UNH7 406 aa8.91□□□□□ -0.98
PDPN-201ENST00000294489 CEP290O15078 2479 aa8.91□□□□□ -0.98
PDPN-201ENST00000294489 MANBAO00462 879 aa8.91□□□□□ -0.98
PDPN-201ENST00000294489 MBTPS2O43462 519 aa8.91□□□□□ -0.98
PDPN-201ENST00000294489 PLRG1O43660 514 aaKnown RBP8.91□□□□□ -0.98
PDPN-201ENST00000294489 LZTS3O60299 673 aaPredicted RBP8.91□□□□□ -0.98
PDPN-201ENST00000294489 RNASEH1O60930 286 aaKnown RBP8.91□□□□□ -0.98
PDPN-201ENST00000294489 EGFP01133 1207 aa8.91□□□□□ -0.98
PDPN-201ENST00000294489 G6PDP11413 515 aa8.91□□□□□ -0.98
PDPN-201ENST00000294489 CCR3P51677 355 aa8.91□□□□□ -0.98
PDPN-201ENST00000294489 RPL38P63173 70 aaKnown RBP8.91□□□□□ -0.98
PDPN-201ENST00000294489 MRPS21P82921 87 aaKnown RBP8.91□□□□□ -0.98
PDPN-201ENST00000294489 RHDQ02161 417 aa8.91□□□□□ -0.98
PDPN-201ENST00000294489 CPSF6Q16630 551 aaKnown RBP eCLIP8.91□□□□□ -0.98
PDPN-201ENST00000294489 TIGD2Q4W5G0 525 aa8.91□□□□□ -0.98
PDPN-201ENST00000294489 CACHD1Q5VU97 1274 aa8.91□□□□□ -0.98
PDPN-201ENST00000294489 LPCAT4Q643R3 524 aa8.91□□□□□ -0.98
PDPN-201ENST00000294489 KIAA1211LQ6NV74 962 aa8.91□□□□□ -0.98
PDPN-201ENST00000294489 PNCKQ6P2M8 343 aa8.91□□□□□ -0.98
PDPN-201ENST00000294489 TMEM220Q6QAJ8 160 aa8.91□□□□□ -0.98
PDPN-201ENST00000294489 ZFAND4Q86XD8 727 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms