RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 AIF1P55008 147 aa10.55□□□□□ -0.72
PKNOX1-201ENST00000291547 RPL6Q02878 288 aaKnown RBP10.55□□□□□ -0.72
PKNOX1-201ENST00000291547 ZNF155Q12901 538 aaPredicted RBP10.55□□□□□ -0.72
PKNOX1-201ENST00000291547 KLF1Q13351 362 aaPredicted RBP10.55□□□□□ -0.72
PKNOX1-201ENST00000291547 TEAD4Q15561 434 aa10.55□□□□□ -0.72
PKNOX1-201ENST00000291547 NPTX1Q15818 432 aa10.55□□□□□ -0.72
PKNOX1-201ENST00000291547 SPRED3Q2MJR0 410 aa10.55□□□□□ -0.72
PKNOX1-201ENST00000291547 ZBED5Q49AG3 693 aa10.55□□□□□ -0.72
PKNOX1-201ENST00000291547 ZBTB2Q8N680 514 aa10.55□□□□□ -0.72
PKNOX1-201ENST00000291547 BEND7Q8N7W2 519 aaPredicted RBP10.55□□□□□ -0.72
PKNOX1-201ENST00000291547 ZNF420Q8TAQ5 688 aaPredicted RBP10.55□□□□□ -0.72
PKNOX1-201ENST00000291547 CCDC107Q8WV48 283 aa10.55□□□□□ -0.72
PKNOX1-201ENST00000291547 COQ8BQ96D53 544 aa10.55□□□□□ -0.72
PKNOX1-201ENST00000291547 DUSP16Q9BY84 665 aa10.55□□□□□ -0.72
PKNOX1-201ENST00000291547 ZNF700Q9H0M5 742 aa10.55□□□□□ -0.72
PKNOX1-201ENST00000291547 PCDHAC1Q9H158 963 aa10.55□□□□□ -0.72
PKNOX1-201ENST00000291547 POLR2J3Q9H1A7 115 aaKnown RBP10.55□□□□□ -0.72
PKNOX1-201ENST00000291547 NMUR1Q9HB89 426 aa10.55□□□□□ -0.72
PKNOX1-201ENST00000291547 NUDT4Q9NZJ9 180 aa10.55□□□□□ -0.72
PKNOX1-201ENST00000291547 MED31Q9Y3C7 131 aa10.55□□□□□ -0.72
PKNOX1-201ENST00000291547 GOLGA4Q13439 2230 aaKnown RBP10.55□□□□□ -0.72
PKNOX1-201ENST00000291547 WNK3Q9BYP7 1800 aa10.55□□□□□ -0.72
PKNOX1-201ENST00000291547 PDPK1O15530 556 aa10.55□□□□□ -0.72
PKNOX1-201ENST00000291547 MFSD11O43934 449 aa10.55□□□□□ -0.72
PKNOX1-201ENST00000291547 CSN2P05814 226 aa10.55□□□□□ -0.72
PKNOX1-201ENST00000291547 C8BP07358 591 aa10.55□□□□□ -0.72
PKNOX1-201ENST00000291547 VARSP26640 1264 aaKnown RBP10.55□□□□□ -0.72
PKNOX1-201ENST00000291547 CASP9P55211 416 aa10.55□□□□□ -0.72
PKNOX1-201ENST00000291547 DGKZQ13574 1117 aa10.55□□□□□ -0.72
PKNOX1-201ENST00000291547 DAG1Q14118 895 aa10.55□□□□□ -0.72
PKNOX1-201ENST00000291547 PLEKHG6Q3KR16 790 aa10.55□□□□□ -0.72
PKNOX1-201ENST00000291547 FAM174BQ3ZCQ3 159 aa10.55□□□□□ -0.72
PKNOX1-201ENST00000291547 ANKRD22Q5VYY1 191 aa10.55□□□□□ -0.72
PKNOX1-201ENST00000291547 VSIG10LQ86VR7 867 aa10.55□□□□□ -0.72
PKNOX1-201ENST00000291547 SRFBP1Q8NEF9 429 aaKnown RBP10.55□□□□□ -0.72
PKNOX1-201ENST00000291547 SLC7A8Q9UHI5 535 aa10.55□□□□□ -0.72
PKNOX1-201ENST00000291547 N4BP2Q86UW6 1770 aaPredicted RBP10.55□□□□□ -0.72
PKNOX1-201ENST00000291547 H7C2Y5 167 aa10.55□□□□□ -0.72
PKNOX1-201ENST00000291547 TGFB1I1O43294 461 aa10.55□□□□□ -0.72
PKNOX1-201ENST00000291547 OAS1P00973 400 aaKnown RBP10.55□□□□□ -0.72
PKNOX1-201ENST00000291547 PRPS2P11908 318 aa10.55□□□□□ -0.72
PKNOX1-201ENST00000291547 CREB1P16220 341 aa10.55□□□□□ -0.72
PKNOX1-201ENST00000291547 ENDOUP21128 410 aaKnown RBP10.55□□□□□ -0.72
PKNOX1-201ENST00000291547 IL32P24001 234 aa10.55□□□□□ -0.72
PKNOX1-201ENST00000291547 PTPN9P43378 593 aa10.55□□□□□ -0.72
PKNOX1-201ENST00000291547 CDH15P55291 814 aa10.55□□□□□ -0.72
PKNOX1-201ENST00000291547 TARDBPQ13148 414 aaKnown RBP eCLIP10.55□□□□□ -0.721e-8■■■■■ 31
PKNOX1-201ENST00000291547 CHIT1Q13231 466 aa10.55□□□□□ -0.72
PKNOX1-201ENST00000291547 FAM76BQ5HYJ3 339 aa10.55□□□□□ -0.72
PKNOX1-201ENST00000291547 FSTL4Q6MZW2 842 aa10.55□□□□□ -0.72
PKNOX1-201ENST00000291547 ZNF517Q6ZMY9 492 aaPredicted RBP10.55□□□□□ -0.72
PKNOX1-201ENST00000291547 LRRC69Q6ZNQ3 347 aa10.55□□□□□ -0.72
PKNOX1-201ENST00000291547 CFAP52Q8N1V2 620 aa10.55□□□□□ -0.72
PKNOX1-201ENST00000291547 OR2L2Q8NH16 312 aa10.55□□□□□ -0.72
PKNOX1-201ENST00000291547 BPIFB1Q8TDL5 484 aa10.55□□□□□ -0.72
PKNOX1-201ENST00000291547 SLC13A3Q8WWT9 602 aa10.55□□□□□ -0.72
PKNOX1-201ENST00000291547 C8orf48Q96LL4 319 aa10.55□□□□□ -0.72
PKNOX1-201ENST00000291547 KCTD7Q96MP8 289 aa10.55□□□□□ -0.72
PKNOX1-201ENST00000291547 KREMEN1Q96MU8 473 aa10.55□□□□□ -0.72
PKNOX1-201ENST00000291547 MCCC1Q96RQ3 725 aaPredicted RBP10.55□□□□□ -0.72
PKNOX1-201ENST00000291547 TRPV4Q9HBA0 871 aa10.55□□□□□ -0.72
PKNOX1-201ENST00000291547 POLR3BQ9NW08 1133 aaPredicted RBP10.55□□□□□ -0.72
PKNOX1-201ENST00000291547 HSPB11Q9Y547 144 aa10.55□□□□□ -0.72
PKNOX1-201ENST00000291547 TLL2Q9Y6L7 1015 aa10.55□□□□□ -0.72
PKNOX1-201ENST00000291547 TNFRSF10AO00220 468 aa10.55□□□□□ -0.72
PKNOX1-201ENST00000291547 NDST3O95803 873 aa10.55□□□□□ -0.72
PKNOX1-201ENST00000291547 SRCP12931 536 aa10.55□□□□□ -0.72
PKNOX1-201ENST00000291547 SLC7A1P30825 629 aa10.55□□□□□ -0.72
PKNOX1-201ENST00000291547 MAB21L1Q13394 359 aa10.55□□□□□ -0.72
PKNOX1-201ENST00000291547 CERS6Q6ZMG9 384 aa10.55□□□□□ -0.72
PKNOX1-201ENST00000291547 TOMM5Q8N4H5 51 aa10.55□□□□□ -0.72
PKNOX1-201ENST00000291547 GOLM1Q8NBJ4 401 aa10.55□□□□□ -0.72
PKNOX1-201ENST00000291547 IFT27Q9BW83 186 aa10.55□□□□□ -0.72
PKNOX1-201ENST00000291547 EBPLQ9BY08 206 aa10.55□□□□□ -0.72
PKNOX1-201ENST00000291547 ZNF350Q9GZX5 532 aa10.55□□□□□ -0.72
PKNOX1-201ENST00000291547 ZNF696Q9H7X3 374 aa10.55□□□□□ -0.72
PKNOX1-201ENST00000291547 ASAH2Q9NR71 780 aa10.55□□□□□ -0.72
PKNOX1-201ENST00000291547 CTPS2Q9NRF8 586 aa10.55□□□□□ -0.72
PKNOX1-201ENST00000291547 MKLN1Q9UL63 735 aa10.55□□□□□ -0.72
PKNOX1-201ENST00000291547 H3BSA7 217 aa10.54□□□□□ -0.72
PKNOX1-201ENST00000291547 CACNB4O00305 520 aaPredicted RBP10.54□□□□□ -0.72
PKNOX1-201ENST00000291547 CCL22O00626 93 aa10.54□□□□□ -0.72
PKNOX1-201ENST00000291547 MEIS2O14770 477 aa10.54□□□□□ -0.72
PKNOX1-201ENST00000291547 ZNF208O43345 1280 aa10.54□□□□□ -0.72
PKNOX1-201ENST00000291547 ITM2AO43736 263 aa10.54□□□□□ -0.72
PKNOX1-201ENST00000291547 BEX3Q00994 111 aa10.54□□□□□ -0.72
PKNOX1-201ENST00000291547 HSPB3Q12988 150 aa10.54□□□□□ -0.72
PKNOX1-201ENST00000291547 TARBP2Q15633 366 aaKnown RBP10.54□□□□□ -0.72
PKNOX1-201ENST00000291547 TPRG1LQ5T0D9 272 aa10.54□□□□□ -0.72
PKNOX1-201ENST00000291547 FAM46CQ5VWP2 391 aa10.54□□□□□ -0.72
PKNOX1-201ENST00000291547 EEF1DP3Q658K8 133 aa10.54□□□□□ -0.72
PKNOX1-201ENST00000291547 RANBP3LQ86VV4 465 aaPredicted RBP10.54□□□□□ -0.72
PKNOX1-201ENST00000291547 GALNT12Q8IXK2 581 aa10.54□□□□□ -0.72
PKNOX1-201ENST00000291547 SETD6Q8TBK2 473 aa10.54□□□□□ -0.72
PKNOX1-201ENST00000291547 FAM110BQ8TC76 370 aa10.54□□□□□ -0.72
PKNOX1-201ENST00000291547 SEC14L1Q92503 715 aa10.54□□□□□ -0.72
PKNOX1-201ENST00000291547 S100PBPQ96BU1 408 aa10.54□□□□□ -0.72
PKNOX1-201ENST00000291547 FEM1CQ96JP0 617 aa10.54□□□□□ -0.72
PKNOX1-201ENST00000291547 CPXM1Q96SM3 734 aa10.54□□□□□ -0.72
PKNOX1-201ENST00000291547 LPIN3Q9BQK8 851 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms