RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 THSD1Q9NS62 852 aa8.88□□□□□ -0.99
HMGN1-201ENST00000288344 SPHK1Q9NYA1 384 aa8.88□□□□□ -0.99
HMGN1-201ENST00000288344 EGFL7Q9UHF1 273 aa8.88□□□□□ -0.99
HMGN1-201ENST00000288344 ANAPC5Q9UJX4 755 aa8.88□□□□□ -0.99
HMGN1-201ENST00000288344 POMT2Q9UKY4 750 aa8.88□□□□□ -0.99
HMGN1-201ENST00000288344 BTRCQ9Y297 605 aa8.88□□□□□ -0.99
HMGN1-201ENST00000288344 DHRS7Q9Y394 339 aa8.88□□□□□ -0.99
HMGN1-201ENST00000288344 TMEM184BQ9Y519 407 aaPredicted RBP8.88□□□□□ -0.99
HMGN1-201ENST00000288344 MRFAP1Q9Y605 127 aa8.88□□□□□ -0.99
HMGN1-201ENST00000288344 NFS1Q9Y697 457 aa8.88□□□□□ -0.99
HMGN1-201ENST00000288344 PIEZO2Q9H5I5 2752 aa8.87□□□□□ -0.99
HMGN1-201ENST00000288344 A0A1W2PPV9 198 aa8.87□□□□□ -0.99
HMGN1-201ENST00000288344 OR6C74A6NCV1 312 aa8.87□□□□□ -0.99
HMGN1-201ENST00000288344 A8MU76 341 aa8.87□□□□□ -0.99
HMGN1-201ENST00000288344 H3BMM5 538 aa8.87□□□□□ -0.99
HMGN1-201ENST00000288344 BTN3A1O00481 513 aa8.87□□□□□ -0.99
HMGN1-201ENST00000288344 KPNA5O15131 536 aa8.87□□□□□ -0.99
HMGN1-201ENST00000288344 HCRTR1O43613 425 aa8.87□□□□□ -0.99
HMGN1-201ENST00000288344 ICMTO60725 284 aa8.87□□□□□ -0.99
HMGN1-201ENST00000288344 PSIP1O75475 530 aaKnown RBP8.87□□□□□ -0.99
HMGN1-201ENST00000288344 WISP3O95389 354 aaPredicted RBP8.87□□□□□ -0.99
HMGN1-201ENST00000288344 C1orf105O95561 183 aa8.87□□□□□ -0.99
HMGN1-201ENST00000288344 TSPAN12O95859 305 aa8.87□□□□□ -0.99
HMGN1-201ENST00000288344 DLGAP3O95886 979 aa8.87□□□□□ -0.99
HMGN1-201ENST00000288344 FOLR1P15328 257 aa8.87□□□□□ -0.99
HMGN1-201ENST00000288344 ZNF28P17035 718 aa8.87□□□□□ -0.99
HMGN1-201ENST00000288344 AMD1P17707 334 aa8.87□□□□□ -0.99
HMGN1-201ENST00000288344 ITGB6P18564 788 aa8.87□□□□□ -0.99
HMGN1-201ENST00000288344 PAMP19021 973 aa8.87□□□□□ -0.99
HMGN1-201ENST00000288344 WT1P19544 449 aaPredicted RBP8.87□□□□□ -0.99
HMGN1-201ENST00000288344 RBMS1P29558 406 aaKnown RBP8.87□□□□□ -0.99
HMGN1-201ENST00000288344 EIF3BP55884 814 aaKnown RBP8.87□□□□□ -0.99
HMGN1-201ENST00000288344 GPX6P59796 221 aa8.87□□□□□ -0.99
HMGN1-201ENST00000288344 MPP1Q00013 466 aa8.87□□□□□ -0.99
HMGN1-201ENST00000288344 HSPA14Q0VDF9 509 aa8.87□□□□□ -0.99
HMGN1-201ENST00000288344 PRKG2Q13237 762 aa8.87□□□□□ -0.99
HMGN1-201ENST00000288344 BRD3Q15059 726 aa8.87□□□□□ -0.99
HMGN1-201ENST00000288344 TGIF1Q15583 401 aa8.87□□□□□ -0.99
HMGN1-201ENST00000288344 ZIC1Q15915 447 aa8.87□□□□□ -0.99
HMGN1-201ENST00000288344 HIF1AQ16665 826 aa8.87□□□□□ -0.99
HMGN1-201ENST00000288344 ZXDCQ2QGD7 858 aaPredicted RBP8.87□□□□□ -0.99
HMGN1-201ENST00000288344 CCSMST1Q4G0I0 132 aa8.87□□□□□ -0.99
HMGN1-201ENST00000288344 KIAA1614Q5VZ46 1190 aa8.87□□□□□ -0.99
HMGN1-201ENST00000288344 ZNF470Q6ECI4 717 aa8.87□□□□□ -0.99
HMGN1-201ENST00000288344 CASC4Q6P4E1 433 aa8.87□□□□□ -0.99
HMGN1-201ENST00000288344 UNC5DQ6UXZ4 953 aa8.87□□□□□ -0.99
HMGN1-201ENST00000288344 ZNF517Q6ZMY9 492 aaPredicted RBP8.87□□□□□ -0.99
HMGN1-201ENST00000288344 KIAA0408Q6ZU52 694 aa8.87□□□□□ -0.99
HMGN1-201ENST00000288344 NEK10Q6ZWH5 1172 aa8.87□□□□□ -0.99
HMGN1-201ENST00000288344 AMIGO1Q86WK6 493 aa8.87□□□□□ -0.99
HMGN1-201ENST00000288344 KMT5CQ86Y97 462 aa8.87□□□□□ -0.99
HMGN1-201ENST00000288344 TRIM48Q8IWZ4 208 aa8.87□□□□□ -0.99
HMGN1-201ENST00000288344 LRRC56Q8IYG6 542 aaPredicted RBP8.87□□□□□ -0.99
HMGN1-201ENST00000288344 PDIK1LQ8N165 341 aa8.87□□□□□ -0.99
HMGN1-201ENST00000288344 NOA1Q8NC60 698 aaKnown RBP8.87□□□□□ -0.99
HMGN1-201ENST00000288344 FBXO15Q8NCQ5 510 aaPredicted RBP8.87□□□□□ -0.99
HMGN1-201ENST00000288344 ZNF248Q8NDW4 579 aa8.87□□□□□ -0.99
HMGN1-201ENST00000288344 ASB11Q8WXH4 323 aa8.87□□□□□ -0.99
HMGN1-201ENST00000288344 UBXN4Q92575 508 aa8.87□□□□□ -0.99
HMGN1-201ENST00000288344 COL26A1Q96A83 441 aa8.87□□□□□ -0.99
HMGN1-201ENST00000288344 CERS2Q96G23 380 aa8.87□□□□□ -0.99
HMGN1-201ENST00000288344 ZDHHC12Q96GR4 267 aa8.87□□□□□ -0.99
HMGN1-201ENST00000288344 CRELD1Q96HD1 420 aa8.87□□□□□ -0.99
HMGN1-201ENST00000288344 AHCYL2Q96HN2 611 aaKnown RBP8.87□□□□□ -0.99
HMGN1-201ENST00000288344 TGM7Q96PF1 710 aa8.87□□□□□ -0.99
HMGN1-201ENST00000288344 PANX3Q96QZ0 392 aa8.87□□□□□ -0.99
HMGN1-201ENST00000288344 LRRC1Q9BTT6 524 aa8.87□□□□□ -0.99
HMGN1-201ENST00000288344 PHACTR1Q9C0D0 580 aa8.87□□□□□ -0.99
HMGN1-201ENST00000288344 FBXO6Q9NRD1 293 aaPredicted RBP8.87□□□□□ -0.99
HMGN1-201ENST00000288344 C1GALT1Q9NS00 363 aa8.87□□□□□ -0.99
HMGN1-201ENST00000288344 C20orf96Q9NUD7 363 aaPredicted RBP8.87□□□□□ -0.99
HMGN1-201ENST00000288344 PGPEP1Q9NXJ5 209 aa8.87□□□□□ -0.99
HMGN1-201ENST00000288344 OR6C2Q9NZP2 312 aa8.87□□□□□ -0.99
HMGN1-201ENST00000288344 SAMD15Q9P1V8 674 aa8.87□□□□□ -0.99
HMGN1-201ENST00000288344 SLC17A6Q9P2U8 582 aa8.87□□□□□ -0.99
HMGN1-201ENST00000288344 FAM8A1Q9UBU6 413 aa8.87□□□□□ -0.99
HMGN1-201ENST00000288344 PISDQ9UG56 409 aa8.87□□□□□ -0.99
HMGN1-201ENST00000288344 POLG2Q9UHN1 485 aa8.87□□□□□ -0.99
HMGN1-201ENST00000288344 DMGDHQ9UI17 866 aaKnown RBP8.87□□□□□ -0.99
HMGN1-201ENST00000288344 GNPTGQ9UJJ9 305 aa8.87□□□□□ -0.99
HMGN1-201ENST00000288344 KLK4Q9Y5K2 254 aa8.87□□□□□ -0.99
HMGN1-201ENST00000288344 MAD1L1Q9Y6D9 718 aa8.87□□□□□ -0.99
HMGN1-201ENST00000288344 FER1L5A0AVI2 2057 aa8.87□□□□□ -0.99
HMGN1-201ENST00000288344 HEATR5BQ9P2D3 2071 aa8.87□□□□□ -0.99
HMGN1-201ENST00000288344 ATRXP46100 2492 aa8.87□□□□□ -0.99
HMGN1-201ENST00000288344 TLCD2A6NGC4 264 aa8.86□□□□□ -0.99
HMGN1-201ENST00000288344 EFCAB7A8K855 629 aa8.86□□□□□ -0.99
HMGN1-201ENST00000288344 IFRD1O00458 451 aaPredicted RBP8.86□□□□□ -0.99
HMGN1-201ENST00000288344 EIF3HO15372 352 aaKnown RBP eCLIP8.86□□□□□ -0.99
HMGN1-201ENST00000288344 TIAF1O95411 115 aa8.86□□□□□ -0.99
HMGN1-201ENST00000288344 AVPP01185 164 aa8.86□□□□□ -0.99
HMGN1-201ENST00000288344 POLR2CP19387 275 aaPredicted RBP8.86□□□□□ -0.99
HMGN1-201ENST00000288344 CD82P27701 267 aa8.86□□□□□ -0.99
HMGN1-201ENST00000288344 ECHS1P30084 290 aa8.86□□□□□ -0.99
HMGN1-201ENST00000288344 CSTF2P33240 577 aaKnown RBP eCLIP8.86□□□□□ -0.99
HMGN1-201ENST00000288344 CSRP3P50461 194 aa8.86□□□□□ -0.99
HMGN1-201ENST00000288344 CDKN2DP55273 166 aa8.86□□□□□ -0.99
HMGN1-201ENST00000288344 PCBP4P57723 403 aaKnown RBP8.86□□□□□ -0.99
HMGN1-201ENST00000288344 ABRQ12979 859 aa8.86□□□□□ -0.99
HMGN1-201ENST00000288344 SRSF6Q13247 344 aaKnown RBP8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms